RNA–Protein interactions for RNA: ENST00000426155.6

SNX3-204, Transcript of sorting nexin 3, humanhuman

TSL 1 (best) BASIC

Gene SNX3, Length 1,072 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-204ENST00000426155 HSD3B1P14060 373 aa12.64□□□□□ -0.39
SNX3-204ENST00000426155 CD46P15529 392 aa12.64□□□□□ -0.39
SNX3-204ENST00000426155 NME2P22392 152 aa12.64□□□□□ -0.39
SNX3-204ENST00000426155 HSD3B2P26439 372 aa12.64□□□□□ -0.39
SNX3-204ENST00000426155 ALDH3A1P30838 453 aa12.64□□□□□ -0.39
SNX3-204ENST00000426155 TRHRP34981 398 aaPredicted RBP12.64□□□□□ -0.39
SNX3-204ENST00000426155 RFC3P40938 356 aa12.64□□□□□ -0.39
SNX3-204ENST00000426155 SOX3P41225 446 aa12.64□□□□□ -0.39
SNX3-204ENST00000426155 ALDH9A1P49189 494 aa12.64□□□□□ -0.39
SNX3-204ENST00000426155 HLCSP50747 726 aa12.64□□□□□ -0.39
SNX3-204ENST00000426155 SSR4P51571 173 aa12.64□□□□□ -0.39
SNX3-204ENST00000426155 KCNK10P57789 538 aa12.64□□□□□ -0.39
SNX3-204ENST00000426155 ZNF267Q14586 743 aaPredicted RBP12.64□□□□□ -0.39
SNX3-204ENST00000426155 MAPKAPK3Q16644 382 aa12.64□□□□□ -0.39
SNX3-204ENST00000426155 SLC25A25Q6KCM7 469 aa12.64□□□□□ -0.39
SNX3-204ENST00000426155 ZCCHC23Q6ZST2 131 aa12.64□□□□□ -0.39
SNX3-204ENST00000426155 PNPLA5Q7Z6Z6 429 aaPredicted RBP12.64□□□□□ -0.39
SNX3-204ENST00000426155 TMEM156Q8N614 296 aa12.64□□□□□ -0.39
SNX3-204ENST00000426155 CPSF7Q8N684 471 aaKnown RBP12.64□□□□□ -0.39
SNX3-204ENST00000426155 TCP10LQ8TDR4 215 aa12.64□□□□□ -0.39
SNX3-204ENST00000426155 TM4SF18Q96CE8 201 aa12.64□□□□□ -0.39
SNX3-204ENST00000426155 RBM18Q96H35 190 aaKnown RBP12.64□□□□□ -0.39
SNX3-204ENST00000426155 SENP5Q96HI0 755 aaPredicted RBP12.64□□□□□ -0.39
SNX3-204ENST00000426155 RASL10BQ96S79 203 aa12.64□□□□□ -0.39
SNX3-204ENST00000426155 ROPN1BQ9BZX4 212 aaPredicted RBP12.64□□□□□ -0.39
SNX3-204ENST00000426155 ROPN1Q9HAT0 212 aaPredicted RBP12.64□□□□□ -0.39
SNX3-204ENST00000426155 MYOTQ9UBF9 498 aa12.64□□□□□ -0.39
SNX3-204ENST00000426155 HEY2Q9UBP5 337 aa12.64□□□□□ -0.39
SNX3-204ENST00000426155 COPS7AQ9UBW8 275 aa12.64□□□□□ -0.39
SNX3-204ENST00000426155 PRDM4Q9UKN5 801 aa12.64□□□□□ -0.39
SNX3-204ENST00000426155 FIS1Q9Y3D6 152 aa12.64□□□□□ -0.39
SNX3-204ENST00000426155 PCDHA9Q9Y5H5 950 aa12.64□□□□□ -0.39
SNX3-204ENST00000426155 NCKAP5O14513 1909 aa12.63□□□□□ -0.39
SNX3-204ENST00000426155 TMEM233B4DJY2 109 aa12.63□□□□□ -0.39
SNX3-204ENST00000426155 PCDH7O60245 1069 aa12.63□□□□□ -0.39
SNX3-204ENST00000426155 ERAL1O75616 437 aaKnown RBP12.63□□□□□ -0.39
SNX3-204ENST00000426155 AGFG2O95081 481 aa12.63□□□□□ -0.39
SNX3-204ENST00000426155 CHRNGP07510 517 aa12.63□□□□□ -0.39
SNX3-204ENST00000426155 IL3P08700 152 aa12.63□□□□□ -0.39
SNX3-204ENST00000426155 EDN3P14138 238 aa12.63□□□□□ -0.39
SNX3-204ENST00000426155 PIK3R1P27986 724 aa12.63□□□□□ -0.39
SNX3-204ENST00000426155 SSTR4P31391 388 aa12.63□□□□□ -0.39
SNX3-204ENST00000426155 GPR85P60893 370 aa12.63□□□□□ -0.39
SNX3-204ENST00000426155 ELOAQ14241 798 aaKnown RBP12.63□□□□□ -0.39
SNX3-204ENST00000426155 SPRED3Q2MJR0 410 aa12.63□□□□□ -0.39
SNX3-204ENST00000426155 FHL5Q5TD97 284 aa12.63□□□□□ -0.39
SNX3-204ENST00000426155 SLC48A1Q6P1K1 146 aa12.63□□□□□ -0.39
SNX3-204ENST00000426155 IL20RBQ6UXL0 311 aa12.63□□□□□ -0.39
SNX3-204ENST00000426155 TMEM178AQ8NBL3 297 aa12.63□□□□□ -0.39
SNX3-204ENST00000426155 RIT1Q92963 219 aa12.63□□□□□ -0.39
SNX3-204ENST00000426155 FBXL20Q96IG2 436 aa12.63□□□□□ -0.39
SNX3-204ENST00000426155 FRMD6Q96NE9 622 aa12.63□□□□□ -0.39
SNX3-204ENST00000426155 ZIM3Q96PE6 472 aa12.63□□□□□ -0.39
SNX3-204ENST00000426155 GAL3ST4Q96RP7 486 aa12.63□□□□□ -0.39
SNX3-204ENST00000426155 TRIM45Q9H8W5 580 aaPredicted RBP12.63□□□□□ -0.39
SNX3-204ENST00000426155 MCM8Q9UJA3 840 aa12.63□□□□□ -0.39
SNX3-204ENST00000426155 CES1P1Q9UKY3 287 aa12.63□□□□□ -0.39
SNX3-204ENST00000426155 YARS2Q9Y2Z4 477 aaKnown RBP12.63□□□□□ -0.39
SNX3-204ENST00000426155 PCDHGB6Q9Y5F9 930 aa12.63□□□□□ -0.39
SNX3-204ENST00000426155 POLEQ07864 2286 aa12.63□□□□□ -0.39
SNX3-204ENST00000426155 SPTAN1Q13813 2472 aaKnown RBP12.63□□□□□ -0.39
SNX3-204ENST00000426155 USP9YO00507 2555 aaPredicted RBP12.63□□□□□ -0.39
SNX3-204ENST00000426155 A0A0G2JMM0 328 aa12.62□□□□□ -0.39
SNX3-204ENST00000426155 A0A1W2PPB8 328 aa12.62□□□□□ -0.39
SNX3-204ENST00000426155 A0A1W2PRS3 328 aa12.62□□□□□ -0.39
SNX3-204ENST00000426155 ASPDHA6ND91 283 aa12.62□□□□□ -0.39
SNX3-204ENST00000426155 KIR3DP1A8MWS1 328 aa12.62□□□□□ -0.39
SNX3-204ENST00000426155 G3V3Y1 287 aa12.62□□□□□ -0.39
SNX3-204ENST00000426155 ZNHIT1O43257 154 aa12.62□□□□□ -0.39
SNX3-204ENST00000426155 TYROBPO43914 113 aa12.62□□□□□ -0.39
SNX3-204ENST00000426155 TRIM13O60858 407 aa12.62□□□□□ -0.39
SNX3-204ENST00000426155 CRCPO75575 148 aa12.62□□□□□ -0.39
SNX3-204ENST00000426155 SLC35E2P0CK97 266 aa12.62□□□□□ -0.39
SNX3-204ENST00000426155 CPMP14384 443 aa12.62□□□□□ -0.39
SNX3-204ENST00000426155 TIA1P31483 386 aaKnown RBP eCLIP12.62□□□□□ -0.393e-15■■■■■ 33.6
SNX3-204ENST00000426155 ARRB2P32121 409 aa12.62□□□□□ -0.39
SNX3-204ENST00000426155 FEN1P39748 380 aaKnown RBP12.62□□□□□ -0.39
SNX3-204ENST00000426155 XKP51811 444 aa12.62□□□□□ -0.39
SNX3-204ENST00000426155 GABPB1Q06547 395 aaPredicted RBP12.62□□□□□ -0.39
SNX3-204ENST00000426155 ACSM2AQ08AH3 577 aa12.62□□□□□ -0.39
SNX3-204ENST00000426155 ASPHQ12797 758 aa12.62□□□□□ -0.39
SNX3-204ENST00000426155 RNFT1Q5M7Z0 435 aa12.62□□□□□ -0.39
SNX3-204ENST00000426155 SPDYAQ5MJ70 313 aa12.62□□□□□ -0.39
SNX3-204ENST00000426155 ACSM2BQ68CK6 577 aa12.62□□□□□ -0.39
SNX3-204ENST00000426155 GALNT12Q8IXK2 581 aa12.62□□□□□ -0.39
SNX3-204ENST00000426155 HORMAD2Q8N7B1 307 aa12.62□□□□□ -0.39
SNX3-204ENST00000426155 GBP7Q8N8V2 638 aaPredicted RBP12.62□□□□□ -0.39
SNX3-204ENST00000426155 SIMC1Q8NDZ2 872 aa12.62□□□□□ -0.39
SNX3-204ENST00000426155 OR4K14Q8NGD5 310 aa12.62□□□□□ -0.39
SNX3-204ENST00000426155 OR8K3Q8NH51 312 aa12.62□□□□□ -0.39
SNX3-204ENST00000426155 CDC26Q8NHZ8 85 aa12.62□□□□□ -0.39
SNX3-204ENST00000426155 ASB15Q8WXK1 588 aa12.62□□□□□ -0.39
SNX3-204ENST00000426155 KLHL29Q96CT2 875 aa12.62□□□□□ -0.39
SNX3-204ENST00000426155 SMC6Q96SB8 1091 aa12.62□□□□□ -0.39
SNX3-204ENST00000426155 PELOQ9BRX2 385 aaKnown RBP12.62□□□□□ -0.39
SNX3-204ENST00000426155 TMEM109Q9BVC6 243 aa12.62□□□□□ -0.39
SNX3-204ENST00000426155 NMRK1Q9NWW6 199 aa12.62□□□□□ -0.39
SNX3-204ENST00000426155 ERRFI1Q9UJM3 462 aaPredicted RBP12.62□□□□□ -0.39
SNX3-204ENST00000426155 MID2Q9UJV3 735 aa12.62□□□□□ -0.39
SNX3-204ENST00000426155 ERVK-11Q9UQG0 969 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms