RNA–Protein interactions for RNA: ENST00000425660.5

ACTB-204, Transcript of actin beta, humanhuman

TSL 1 (best)

Gene ACTB, Length 1,845 nt, Biotype nonsense mediated decay, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-204ENST00000425660 ANGPT4Q9Y264 503 aa14.31□□□□□ -0.12
ACTB-204ENST00000425660 SPEGQ15772 3267 aa14.3□□□□□ -0.12
ACTB-204ENST00000425660 PDLIM1O00151 329 aa14.3□□□□□ -0.12
ACTB-204ENST00000425660 SUV39H1O43463 412 aa14.3□□□□□ -0.12
ACTB-204ENST00000425660 CD1CP29017 333 aa14.3□□□□□ -0.12
ACTB-204ENST00000425660 AQP1P29972 269 aa14.3□□□□□ -0.12
ACTB-204ENST00000425660 XKP51811 444 aa14.3□□□□□ -0.12
ACTB-204ENST00000425660 KCNJ10P78508 379 aa14.3□□□□□ -0.12
ACTB-204ENST00000425660 SIM1P81133 766 aaPredicted RBP14.3□□□□□ -0.12
ACTB-204ENST00000425660 TXNL4AP83876 142 aaKnown RBP14.3□□□□□ -0.12
ACTB-204ENST00000425660 PRR5P85299 388 aa14.3□□□□□ -0.12
ACTB-204ENST00000425660 MED21Q13503 144 aa14.3□□□□□ -0.12
ACTB-204ENST00000425660 MAPK11Q15759 364 aa14.3□□□□□ -0.12
ACTB-204ENST00000425660 GPR19Q15760 415 aa14.3□□□□□ -0.12
ACTB-204ENST00000425660 NDUFA9Q16795 377 aa14.3□□□□□ -0.12
ACTB-204ENST00000425660 IQCCQ4KMZ1 466 aa14.3□□□□□ -0.12
ACTB-204ENST00000425660 REEP3Q6NUK4 255 aa14.3□□□□□ -0.12
ACTB-204ENST00000425660 TNFAIP8L2Q6P589 184 aaPredicted RBP14.3□□□□□ -0.12
ACTB-204ENST00000425660 TMEM107Q6UX40 140 aa14.3□□□□□ -0.12
ACTB-204ENST00000425660 VTCN1Q7Z7D3 282 aa14.3□□□□□ -0.12
ACTB-204ENST00000425660 OR6C4Q8NGE1 309 aa14.3□□□□□ -0.12
ACTB-204ENST00000425660 OR10Q1Q8NGQ4 319 aa14.3□□□□□ -0.12
ACTB-204ENST00000425660 OR9A2Q8NGT5 310 aa14.3□□□□□ -0.12
ACTB-204ENST00000425660 TANKQ92844 425 aa14.3□□□□□ -0.12
ACTB-204ENST00000425660 NR1H4Q96RI1 486 aaPredicted RBP14.3□□□□□ -0.12
ACTB-204ENST00000425660 CLK4Q9HAZ1 481 aaKnown RBP14.3□□□□□ -0.12
ACTB-204ENST00000425660 CAPN10Q9HC96 672 aa14.3□□□□□ -0.12
ACTB-204ENST00000425660 CABIN1Q9Y6J0 2220 aa14.3□□□□□ -0.12
ACTB-204ENST00000425660 H3BMH7 237 aa14.29□□□□□ -0.12
ACTB-204ENST00000425660 SGK494L7N484 410 aa14.29□□□□□ -0.12
ACTB-204ENST00000425660 PLOD2O00469 737 aa14.29□□□□□ -0.12
ACTB-204ENST00000425660 DLGAP1O14490 977 aa14.29□□□□□ -0.12
ACTB-204ENST00000425660 EMC8O43402 210 aa14.29□□□□□ -0.12
ACTB-204ENST00000425660 FOXS1O43638 330 aa14.29□□□□□ -0.12
ACTB-204ENST00000425660 DPM1O60762 260 aa14.29□□□□□ -0.12
ACTB-204ENST00000425660 MED26O95402 600 aa14.29□□□□□ -0.12
ACTB-204ENST00000425660 NSA2O95478 260 aaKnown RBP14.29□□□□□ -0.12
ACTB-204ENST00000425660 ATP1B1P05026 303 aa14.29□□□□□ -0.12
ACTB-204ENST00000425660 MSL3P1P0C860 447 aa14.29□□□□□ -0.12
ACTB-204ENST00000425660 CSF2RBP32927 897 aa14.29□□□□□ -0.12
ACTB-204ENST00000425660 RAB38P57729 211 aa14.29□□□□□ -0.12
ACTB-204ENST00000425660 SQSTM1Q13501 440 aa14.29□□□□□ -0.12
ACTB-204ENST00000425660 ZNF528Q3MIS6 628 aa14.29□□□□□ -0.12
ACTB-204ENST00000425660 NHSL2Q5HYW2 709 aa14.29□□□□□ -0.12
ACTB-204ENST00000425660 RABEPKQ7Z6M1 372 aa14.29□□□□□ -0.12
ACTB-204ENST00000425660 PATL1Q86TB9 770 aaKnown RBP14.29□□□□□ -0.12
ACTB-204ENST00000425660 ZDHHC21Q8IVQ6 265 aa14.29□□□□□ -0.12
ACTB-204ENST00000425660 FAM181AQ8N9Y4 354 aa14.29□□□□□ -0.12
ACTB-204ENST00000425660 OR9A4Q8NGU2 314 aa14.29□□□□□ -0.12
ACTB-204ENST00000425660 CEP76Q8TAP6 659 aa14.29□□□□□ -0.12
ACTB-204ENST00000425660 TMBIM1Q969X1 311 aa14.29□□□□□ -0.12
ACTB-204ENST00000425660 TAMM41Q96BW9 452 aa14.29□□□□□ -0.12
ACTB-204ENST00000425660 VPS50Q96JG6 964 aa14.29□□□□□ -0.12
ACTB-204ENST00000425660 SLC35G5Q96KT7 338 aa14.29□□□□□ -0.12
ACTB-204ENST00000425660 C7orf34Q96L11 122 aa14.29□□□□□ -0.12
ACTB-204ENST00000425660 OSBPL11Q9BXB4 747 aa14.29□□□□□ -0.12
ACTB-204ENST00000425660 Q9H521 79 aa14.29□□□□□ -0.12
ACTB-204ENST00000425660 SOHLH2Q9NX45 425 aa14.29□□□□□ -0.12
ACTB-204ENST00000425660 PADI2Q9Y2J8 665 aa14.29□□□□□ -0.12
ACTB-204ENST00000425660 AP4B1Q9Y6B7 739 aa14.29□□□□□ -0.12
ACTB-204ENST00000425660 AK5Q9Y6K8 562 aa14.29□□□□□ -0.12
ACTB-204ENST00000425660 FRYLO94915 3013 aa14.29□□□□□ -0.12
ACTB-204ENST00000425660 ARID1BQ8NFD5 2236 aaPredicted RBP14.29□□□□□ -0.12
ACTB-204ENST00000425660 M0QX08 132 aa14.29□□□□□ -0.12
ACTB-204ENST00000425660 RDH16O75452 317 aa14.29□□□□□ -0.12
ACTB-204ENST00000425660 IFNA14P01570 189 aa14.29□□□□□ -0.12
ACTB-204ENST00000425660 HMGN2P05204 90 aaKnown RBP14.29□□□□□ -0.12
ACTB-204ENST00000425660 FABP3P05413 133 aa14.29□□□□□ -0.12
ACTB-204ENST00000425660 IFI6P09912 130 aa14.29□□□□□ -0.12
ACTB-204ENST00000425660 ALPPL2P10696 532 aa14.29□□□□□ -0.12
ACTB-204ENST00000425660 CPMP14384 443 aa14.29□□□□□ -0.12
ACTB-204ENST00000425660 ZNF23P17027 643 aa14.29□□□□□ -0.12
ACTB-204ENST00000425660 MC3RP41968 323 aa14.29□□□□□ -0.12
ACTB-204ENST00000425660 CLCN2P51788 898 aa14.29□□□□□ -0.12
ACTB-204ENST00000425660 HSD11B2P80365 405 aa14.29□□□□□ -0.12
ACTB-204ENST00000425660 SHC2P98077 582 aa14.29□□□□□ -0.12
ACTB-204ENST00000425660 VLDLRP98155 873 aa14.29□□□□□ -0.12
ACTB-204ENST00000425660 PRSS42Q7Z5A4 293 aa14.29□□□□□ -0.12
ACTB-204ENST00000425660 GATAD2AQ86YP4 633 aa14.29□□□□□ -0.12
ACTB-204ENST00000425660 ZC3H7AQ8IWR0 971 aaKnown RBP14.29□□□□□ -0.12
ACTB-204ENST00000425660 MARVELD2Q8N4S9 558 aa14.29□□□□□ -0.12
ACTB-204ENST00000425660 TTC29Q8NA56 475 aaPredicted RBP14.29□□□□□ -0.12
ACTB-204ENST00000425660 ZBTB44Q8NCP5 570 aa14.29□□□□□ -0.12
ACTB-204ENST00000425660 TMEM52Q8NDY8 209 aa14.29□□□□□ -0.12
ACTB-204ENST00000425660 SLC41A2Q96JW4 573 aa14.29□□□□□ -0.12
ACTB-204ENST00000425660 OR51I1Q9H343 314 aa14.29□□□□□ -0.12
ACTB-204ENST00000425660 C3orf14Q9HBI5 128 aa14.29□□□□□ -0.12
ACTB-204ENST00000425660 SCN3AQ9NY46 2000 aa14.28□□□□□ -0.12
ACTB-204ENST00000425660 GIMAP1-GIMAP5A0A087WTJ2 511 aa14.28□□□□□ -0.12
ACTB-204ENST00000425660 LY6G6EA0A0G2JKS1 128 aa14.28□□□□□ -0.12
ACTB-204ENST00000425660 HYKKA2RU49 373 aa14.28□□□□□ -0.12
ACTB-204ENST00000425660 FAM86C2PA6NEL3 165 aa14.28□□□□□ -0.12
ACTB-204ENST00000425660 EI24O14681 340 aa14.28□□□□□ -0.12
ACTB-204ENST00000425660 ASNA1O43681 348 aa14.28□□□□□ -0.12
ACTB-204ENST00000425660 SLITRK5O94991 958 aa14.28□□□□□ -0.12
ACTB-204ENST00000425660 PGM3O95394 542 aa14.28□□□□□ -0.12
ACTB-204ENST00000425660 GPR75O95800 540 aa14.28□□□□□ -0.12
ACTB-204ENST00000425660 PORP16435 677 aaPredicted RBP14.28□□□□□ -0.12
ACTB-204ENST00000425660 MATN1P21941 496 aa14.28□□□□□ -0.12
ACTB-204ENST00000425660 PPM1FP49593 454 aaPredicted RBP14.28□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms