RNA–Protein interactions for RNA: ENST00000424478.5

PRPF39-202, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 3,174 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-202ENST00000424478 MS4A12Q9NXJ0 267 aa12.59□□□□□ -0.39
PRPF39-202ENST00000424478 TAS2R1Q9NYW7 299 aa12.59□□□□□ -0.39
PRPF39-202ENST00000424478 IL17BQ9UHF5 180 aa12.59□□□□□ -0.39
PRPF39-202ENST00000424478 C3orf18Q9UK00 162 aa12.59□□□□□ -0.39
PRPF39-202ENST00000424478 CROTQ9UKG9 612 aa12.59□□□□□ -0.39
PRPF39-202ENST00000424478 PADI1Q9ULC6 663 aa12.59□□□□□ -0.39
PRPF39-202ENST00000424478 LOC101059948A0A1B0GTJ6 334 aa12.59□□□□□ -0.39
PRPF39-202ENST00000424478 PRSS51A0A1B0GVH4 220 aa12.59□□□□□ -0.39
PRPF39-202ENST00000424478 DLGAP3O95886 979 aa12.59□□□□□ -0.39
PRPF39-202ENST00000424478 CPMP14384 443 aa12.59□□□□□ -0.39
PRPF39-202ENST00000424478 TCN1P20061 433 aaPredicted RBP12.59□□□□□ -0.39
PRPF39-202ENST00000424478 RBMS1P29558 406 aaKnown RBP12.59□□□□□ -0.39
PRPF39-202ENST00000424478 RHAGQ02094 409 aa12.59□□□□□ -0.39
PRPF39-202ENST00000424478 ART3Q13508 389 aa12.59□□□□□ -0.39
PRPF39-202ENST00000424478 CRB3Q9BUF7 120 aa12.59□□□□□ -0.39
PRPF39-202ENST00000424478 SPRY4Q9C004 299 aa12.59□□□□□ -0.39
PRPF39-202ENST00000424478 PAIP1Q9H074 479 aaKnown RBP12.59□□□□□ -0.39
PRPF39-202ENST00000424478 OR10H2O60403 315 aa12.59□□□□□ -0.39
PRPF39-202ENST00000424478 UNC5CO95185 931 aa12.59□□□□□ -0.39
PRPF39-202ENST00000424478 CDK4P11802 303 aa12.59□□□□□ -0.39
PRPF39-202ENST00000424478 PTPN6P29350 595 aa12.59□□□□□ -0.39
PRPF39-202ENST00000424478 NCALDP61601 193 aa12.59□□□□□ -0.39
PRPF39-202ENST00000424478 OLIG3Q7RTU3 272 aa12.59□□□□□ -0.39
PRPF39-202ENST00000424478 GALNT10Q86SR1 603 aa12.59□□□□□ -0.39
PRPF39-202ENST00000424478 DEFB107AQ8IZN7 70 aa12.59□□□□□ -0.39
PRPF39-202ENST00000424478 CNPPD1Q9BV87 410 aa12.59□□□□□ -0.39
PRPF39-202ENST00000424478 BHLHE41Q9C0J9 482 aaPredicted RBP12.59□□□□□ -0.39
PRPF39-202ENST00000424478 SIRT3Q9NTG7 399 aaPredicted RBP12.59□□□□□ -0.39
PRPF39-202ENST00000424478 NIPSNAP3AQ9UFN0 247 aaPredicted RBP12.59□□□□□ -0.39
PRPF39-202ENST00000424478 LEF1Q9UJU2 399 aaPredicted RBP12.59□□□□□ -0.39
PRPF39-202ENST00000424478 KLF7O75840 302 aaPredicted RBP12.58□□□□□ -0.4
PRPF39-202ENST00000424478 PDE5AO76074 875 aa12.58□□□□□ -0.4
PRPF39-202ENST00000424478 HEXBP07686 556 aa12.58□□□□□ -0.4
PRPF39-202ENST00000424478 PCSK2P16519 638 aa12.58□□□□□ -0.4
PRPF39-202ENST00000424478 CALB2P22676 271 aa12.58□□□□□ -0.4
PRPF39-202ENST00000424478 SSTR4P31391 388 aa12.58□□□□□ -0.4
PRPF39-202ENST00000424478 CPOXP36551 454 aa12.58□□□□□ -0.4
PRPF39-202ENST00000424478 PLA2G5P39877 138 aa12.58□□□□□ -0.4
PRPF39-202ENST00000424478 MRPL19P49406 292 aaKnown RBP12.58□□□□□ -0.4
PRPF39-202ENST00000424478 NCF4Q15080 339 aa12.58□□□□□ -0.4
PRPF39-202ENST00000424478 ATP1A1-AS1Q5TC04 95 aa12.58□□□□□ -0.4
PRPF39-202ENST00000424478 MRPL14Q6P1L8 145 aaKnown RBP12.58□□□□□ -0.4
PRPF39-202ENST00000424478 PARP9Q8IXQ6 854 aa12.58□□□□□ -0.4
PRPF39-202ENST00000424478 OR7G2Q8NG99 324 aa12.58□□□□□ -0.4
PRPF39-202ENST00000424478 LIN28AQ9H9Z2 209 aaKnown RBP12.58□□□□□ -0.4
PRPF39-202ENST00000424478 MKKSQ9NPJ1 570 aaPredicted RBP12.58□□□□□ -0.4
PRPF39-202ENST00000424478 ENAMQ9NRM1 1142 aa12.58□□□□□ -0.4
PRPF39-202ENST00000424478 ATAD3AQ9NVI7 634 aa12.58□□□□□ -0.4
PRPF39-202ENST00000424478 GPN3Q9UHW5 284 aaPredicted RBP12.58□□□□□ -0.4
PRPF39-202ENST00000424478 SEC23IPQ9Y6Y8 1000 aaKnown RBP12.58□□□□□ -0.4
PRPF39-202ENST00000424478 NUP210LQ5VU65 1888 aa12.58□□□□□ -0.4
PRPF39-202ENST00000424478 CLDN4O14493 209 aa12.58□□□□□ -0.4
PRPF39-202ENST00000424478 CTNSO60931 367 aa12.58□□□□□ -0.4
PRPF39-202ENST00000424478 UMODP07911 640 aa12.58□□□□□ -0.4
PRPF39-202ENST00000424478 HBQ1P09105 142 aa12.58□□□□□ -0.4
PRPF39-202ENST00000424478 TNNI3P19429 210 aa12.58□□□□□ -0.4
PRPF39-202ENST00000424478 CSNK2A2P19784 350 aaPredicted RBP12.58□□□□□ -0.4
PRPF39-202ENST00000424478 NTSP30990 170 aa12.58□□□□□ -0.4
PRPF39-202ENST00000424478 EEF1A2Q05639 463 aaKnown RBP12.58□□□□□ -0.4
PRPF39-202ENST00000424478 TP53BP2Q13625 1128 aa12.58□□□□□ -0.4
PRPF39-202ENST00000424478 NNATQ16517 81 aa12.58□□□□□ -0.4
PRPF39-202ENST00000424478 YOD1Q5VVQ6 348 aaPredicted RBP12.58□□□□□ -0.4
PRPF39-202ENST00000424478 FAM91A1Q658Y4 838 aa12.58□□□□□ -0.4
PRPF39-202ENST00000424478 BPHLQ86WA6 291 aaPredicted RBP12.58□□□□□ -0.4
PRPF39-202ENST00000424478 IFNEQ86WN2 208 aa12.58□□□□□ -0.4
PRPF39-202ENST00000424478 LSRQ86X29 649 aaPredicted RBP12.58□□□□□ -0.4
PRPF39-202ENST00000424478 LRRC25Q8N386 305 aaPredicted RBP12.58□□□□□ -0.4
PRPF39-202ENST00000424478 IL22RA1Q8N6P7 574 aa12.58□□□□□ -0.4
PRPF39-202ENST00000424478 LRRC58Q96CX6 371 aa12.58□□□□□ -0.4
PRPF39-202ENST00000424478 MRPS33Q9Y291 106 aaKnown RBP12.58□□□□□ -0.4
PRPF39-202ENST00000424478 RAD1O60671 282 aa12.57□□□□□ -0.4
PRPF39-202ENST00000424478 SEC24DO94855 1032 aaPredicted RBP12.57□□□□□ -0.4
PRPF39-202ENST00000424478 CCNYL3P0C7X3 344 aa12.57□□□□□ -0.4
PRPF39-202ENST00000424478 PORP16435 677 aaPredicted RBP12.57□□□□□ -0.4
PRPF39-202ENST00000424478 DLSTP36957 453 aa12.57□□□□□ -0.4
PRPF39-202ENST00000424478 C21orf58P58505 322 aa12.57□□□□□ -0.4
PRPF39-202ENST00000424478 STX5Q13190 355 aa12.57□□□□□ -0.4
PRPF39-202ENST00000424478 ZNF267Q14586 743 aaPredicted RBP12.57□□□□□ -0.4
PRPF39-202ENST00000424478 MAPRE2Q15555 327 aa12.57□□□□□ -0.4
PRPF39-202ENST00000424478 COX20Q5RI15 118 aa12.57□□□□□ -0.4
PRPF39-202ENST00000424478 SCUBE1Q8IWY4 988 aa12.57□□□□□ -0.4
PRPF39-202ENST00000424478 HOMEZQ8IX15 550 aa12.57□□□□□ -0.4
PRPF39-202ENST00000424478 ZNF595Q8IYB9 648 aa12.57□□□□□ -0.4
PRPF39-202ENST00000424478 EFCAB1Q9HAE3 211 aa12.57□□□□□ -0.4
PRPF39-202ENST00000424478 PSME2Q9UL46 239 aa12.57□□□□□ -0.4
PRPF39-202ENST00000424478 PCDHGA3Q9Y5H0 932 aa12.57□□□□□ -0.4
PRPF39-202ENST00000424478 MYO1GB0I1T2 1018 aa12.57□□□□□ -0.4
PRPF39-202ENST00000424478 CELA2AP08217 269 aa12.57□□□□□ -0.4
PRPF39-202ENST00000424478 OTX2P32243 289 aa12.57□□□□□ -0.4
PRPF39-202ENST00000424478 SPDYE7PQ495Y7 208 aa12.57□□□□□ -0.4
PRPF39-202ENST00000424478 ZNF517Q6ZMY9 492 aaPredicted RBP12.57□□□□□ -0.4
PRPF39-202ENST00000424478 CAMKMTQ7Z624 323 aa12.57□□□□□ -0.4
PRPF39-202ENST00000424478 FAM9CQ8IZT9 166 aa12.57□□□□□ -0.4
PRPF39-202ENST00000424478 TANKQ92844 425 aa12.57□□□□□ -0.4
PRPF39-202ENST00000424478 C16orf58Q96GQ5 468 aa12.57□□□□□ -0.4
PRPF39-202ENST00000424478 ITCHQ96J02 903 aa12.57□□□□□ -0.4
PRPF39-202ENST00000424478 DPH2Q9BQC3 489 aaPredicted RBP12.57□□□□□ -0.4
PRPF39-202ENST00000424478 ADAP2Q9NPF8 381 aa12.57□□□□□ -0.4
PRPF39-202ENST00000424478 FAM120CQ9NX05 1096 aaKnown RBP12.57□□□□□ -0.4
PRPF39-202ENST00000424478 EHD3Q9NZN3 535 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms