RNA–Protein interactions for RNA: ENST00000423635.5

CHCHD3-202, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

TSL 1 (best)

Gene CHCHD3, Length 1,310 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-202ENST00000423635 TRIM64BA6NI03 449 aa15.28■□□□□ 0.04
CHCHD3-202ENST00000423635 TP53I11O14683 189 aa15.28■□□□□ 0.04
CHCHD3-202ENST00000423635 CRLF1O75462 422 aa15.28■□□□□ 0.04
CHCHD3-202ENST00000423635 LRATO95237 230 aa15.28■□□□□ 0.04
CHCHD3-202ENST00000423635 FPR1P21462 350 aa15.28■□□□□ 0.04
CHCHD3-202ENST00000423635 HIST1H1TP22492 207 aaPredicted RBP15.28■□□□□ 0.04
CHCHD3-202ENST00000423635 CPN2P22792 545 aa15.28■□□□□ 0.04
CHCHD3-202ENST00000423635 SLCO1A2P46721 670 aa15.28■□□□□ 0.04
CHCHD3-202ENST00000423635 RCAN2Q14206 197 aa15.28■□□□□ 0.04
CHCHD3-202ENST00000423635 ACKR1Q16570 336 aa15.28■□□□□ 0.04
CHCHD3-202ENST00000423635 DCST1Q5T197 706 aa15.28■□□□□ 0.04
CHCHD3-202ENST00000423635 SLC29A4Q7RTT9 530 aa15.28■□□□□ 0.04
CHCHD3-202ENST00000423635 LUZP2Q86TE4 346 aa15.28■□□□□ 0.04
CHCHD3-202ENST00000423635 GNRHR2Q96P88 292 aa15.28■□□□□ 0.04
CHCHD3-202ENST00000423635 UCN2Q96RP3 112 aa15.28■□□□□ 0.04
CHCHD3-202ENST00000423635 SECISBP2Q96T21 854 aaKnown RBP15.28■□□□□ 0.04
CHCHD3-202ENST00000423635 NAT9Q9BTE0 207 aa15.28■□□□□ 0.04
CHCHD3-202ENST00000423635 WWTR1Q9GZV5 400 aa15.28■□□□□ 0.04
CHCHD3-202ENST00000423635 SLC17A6Q9P2U8 582 aa15.28■□□□□ 0.04
CHCHD3-202ENST00000423635 C15orf41Q9Y2V0 281 aa15.28■□□□□ 0.04
CHCHD3-202ENST00000423635 TESMINQ9Y4I5 508 aa15.28■□□□□ 0.04
CHCHD3-202ENST00000423635 NPEPPSL1A6NEC2 478 aa15.27■□□□□ 0.04
CHCHD3-202ENST00000423635 OR6C76A6NM76 312 aa15.27■□□□□ 0.04
CHCHD3-202ENST00000423635 CAPN14A8MX76 684 aa15.27■□□□□ 0.04
CHCHD3-202ENST00000423635 A8MXE2 369 aa15.27■□□□□ 0.04
CHCHD3-202ENST00000423635 CPN1P15169 458 aa15.27■□□□□ 0.04
CHCHD3-202ENST00000423635 GGT5P36269 586 aa15.27■□□□□ 0.04
CHCHD3-202ENST00000423635 PCYT1AP49585 367 aa15.27■□□□□ 0.04
CHCHD3-202ENST00000423635 SLC37A1P57057 533 aa15.27■□□□□ 0.04
CHCHD3-202ENST00000423635 EBPQ15125 230 aaKnown RBP15.27■□□□□ 0.04
CHCHD3-202ENST00000423635 SPRED3Q2MJR0 410 aa15.27■□□□□ 0.04
CHCHD3-202ENST00000423635 EIPR1Q53HC9 387 aa15.27■□□□□ 0.04
CHCHD3-202ENST00000423635 ADGRE4PQ86SQ3 457 aa15.27■□□□□ 0.04
CHCHD3-202ENST00000423635 PACS2Q86VP3 889 aa15.27■□□□□ 0.04
CHCHD3-202ENST00000423635 PPIL6Q8IXY8 311 aa15.27■□□□□ 0.04
CHCHD3-202ENST00000423635 ST13P4Q8IZP2 240 aaPredicted RBP15.27■□□□□ 0.04
CHCHD3-202ENST00000423635 TAGAPQ8N103 731 aa15.27■□□□□ 0.04
CHCHD3-202ENST00000423635 ZNF441Q8N8Z8 693 aa15.27■□□□□ 0.04
CHCHD3-202ENST00000423635 PPP1R14CQ8TAE6 165 aa15.27■□□□□ 0.04
CHCHD3-202ENST00000423635 SPPL2AQ8TCT8 520 aa15.27■□□□□ 0.04
CHCHD3-202ENST00000423635 TANKQ92844 425 aa15.27■□□□□ 0.04
CHCHD3-202ENST00000423635 TP53INP1Q96A56 240 aa15.27■□□□□ 0.04
CHCHD3-202ENST00000423635 MAGOHBQ96A72 148 aaKnown RBP15.27■□□□□ 0.04
CHCHD3-202ENST00000423635 PTCD3Q96EY7 689 aaKnown RBP15.27■□□□□ 0.04
CHCHD3-202ENST00000423635 RILPQ96NA2 401 aa15.27■□□□□ 0.04
CHCHD3-202ENST00000423635 PIGMQ9H3S5 423 aa15.27■□□□□ 0.04
CHCHD3-202ENST00000423635 PLAC1Q9HBJ0 212 aa15.27■□□□□ 0.04
CHCHD3-202ENST00000423635 MS4A12Q9NXJ0 267 aa15.27■□□□□ 0.04
CHCHD3-202ENST00000423635 MXRA5Q9NR99 2828 aa15.27■□□□□ 0.04
CHCHD3-202ENST00000423635 RTCAO00442 366 aaKnown RBP15.26■□□□□ 0.03
CHCHD3-202ENST00000423635 CLGNO14967 610 aa15.26■□□□□ 0.03
CHCHD3-202ENST00000423635 TAPBPO15533 448 aa15.26■□□□□ 0.03
CHCHD3-202ENST00000423635 CTIFO43310 598 aaKnown RBP15.26■□□□□ 0.03
CHCHD3-202ENST00000423635 ACTL6AO96019 429 aa15.26■□□□□ 0.03
CHCHD3-202ENST00000423635 ALOX15P16050 662 aaPredicted RBP15.26■□□□□ 0.03
CHCHD3-202ENST00000423635 CD22P20273 847 aa15.26■□□□□ 0.03
CHCHD3-202ENST00000423635 CXCR5P32302 372 aa15.26■□□□□ 0.03
CHCHD3-202ENST00000423635 SOX18P35713 384 aa15.26■□□□□ 0.03
CHCHD3-202ENST00000423635 CPA2P48052 419 aa15.26■□□□□ 0.03
CHCHD3-202ENST00000423635 NAGLUP54802 743 aa15.26■□□□□ 0.03
CHCHD3-202ENST00000423635 EEF1A1P68104 462 aaKnown RBP15.26■□□□□ 0.03
CHCHD3-202ENST00000423635 PLIN5Q00G26 463 aa15.26■□□□□ 0.03
CHCHD3-202ENST00000423635 DOC2AQ14183 400 aa15.26■□□□□ 0.03
CHCHD3-202ENST00000423635 RPS6KA2Q15349 733 aa15.26■□□□□ 0.03
CHCHD3-202ENST00000423635 AP5B1Q2VPB7 878 aa15.26■□□□□ 0.03
CHCHD3-202ENST00000423635 TMEM35AQ53FP2 167 aa15.26■□□□□ 0.03
CHCHD3-202ENST00000423635 RNASEH2BQ5TBB1 312 aaKnown RBP15.26■□□□□ 0.03
CHCHD3-202ENST00000423635 EEF1A1P5Q5VTE0 462 aa15.26■□□□□ 0.03
CHCHD3-202ENST00000423635 BICRALQ6AI39 1079 aa15.26■□□□□ 0.03
CHCHD3-202ENST00000423635 RNF111Q6ZNA4 994 aa15.26■□□□□ 0.03
CHCHD3-202ENST00000423635 ADAMTSL2Q86TH1 951 aa15.26■□□□□ 0.03
CHCHD3-202ENST00000423635 SLC44A1Q8WWI5 657 aa15.26■□□□□ 0.03
CHCHD3-202ENST00000423635 GAL3ST4Q96RP7 486 aa15.26■□□□□ 0.03
CHCHD3-202ENST00000423635 CCL19Q99731 98 aa15.26■□□□□ 0.03
CHCHD3-202ENST00000423635 TM9SF2Q99805 663 aa15.26■□□□□ 0.03
CHCHD3-202ENST00000423635 EFCAB11Q9BUY7 163 aa15.26■□□□□ 0.03
CHCHD3-202ENST00000423635 MS4A8Q9BY19 250 aa15.26■□□□□ 0.03
CHCHD3-202ENST00000423635 GSX2Q9BZM3 304 aa15.26■□□□□ 0.03
CHCHD3-202ENST00000423635 RPF2Q9H7B2 306 aaKnown RBP15.26■□□□□ 0.03
CHCHD3-202ENST00000423635 C6orf203Q9P0P8 240 aaPredicted RBP15.26■□□□□ 0.03
CHCHD3-202ENST00000423635 CTNNAL1Q9UBT7 734 aa15.26■□□□□ 0.03
CHCHD3-202ENST00000423635 DEFB108AA8MXU0 73 aa15.25■□□□□ 0.03
CHCHD3-202ENST00000423635 SIAH2O43255 324 aa15.25■□□□□ 0.03
CHCHD3-202ENST00000423635 CNOT4O95628 575 aaKnown RBP15.25■□□□□ 0.03
CHCHD3-202ENST00000423635 CLPSP04118 112 aa15.25■□□□□ 0.03
CHCHD3-202ENST00000423635 CYP4B1P13584 511 aa15.25■□□□□ 0.03
CHCHD3-202ENST00000423635 MC3RP41968 323 aa15.25■□□□□ 0.03
CHCHD3-202ENST00000423635 CASP3P42574 277 aa15.25■□□□□ 0.03
CHCHD3-202ENST00000423635 FBXW4P57775 412 aa15.25■□□□□ 0.03
CHCHD3-202ENST00000423635 HERVK_113P63132 956 aa15.25■□□□□ 0.03
CHCHD3-202ENST00000423635 ERVK-8P63133 956 aa15.25■□□□□ 0.03
CHCHD3-202ENST00000423635 GAB1Q13480 694 aa15.25■□□□□ 0.03
CHCHD3-202ENST00000423635 LAPTM5Q13571 262 aa15.25■□□□□ 0.03
CHCHD3-202ENST00000423635 E2F2Q14209 437 aa15.25■□□□□ 0.03
CHCHD3-202ENST00000423635 TGFBIQ15582 683 aa15.25■□□□□ 0.03
CHCHD3-202ENST00000423635 TSNQ15631 228 aaKnown RBP15.25■□□□□ 0.03
CHCHD3-202ENST00000423635 WIPI1Q5MNZ9 446 aaPredicted RBP15.25■□□□□ 0.03
CHCHD3-202ENST00000423635 FRA10AC1Q70Z53 315 aa15.25■□□□□ 0.03
CHCHD3-202ENST00000423635 IGDCC3Q8IVU1 814 aa15.25■□□□□ 0.03
CHCHD3-202ENST00000423635 TCAIMQ8N3R3 496 aa15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms