RNA–Protein interactions for RNA: ENST00000422344.5

TRAF4-204, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 631 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-204ENST00000422344 ZNF800Q2TB10 664 aaPredicted RBP eCLIP20.31■□□□□ 0.84
TRAF4-204ENST00000422344 KRTCAP3Q53RY4 240 aa20.31■□□□□ 0.84
TRAF4-204ENST00000422344 CFAP157Q5JU67 520 aa20.31■□□□□ 0.84
TRAF4-204ENST00000422344 C6orf163Q5TEZ5 329 aa20.31■□□□□ 0.84
TRAF4-204ENST00000422344 IL20RBQ6UXL0 311 aa20.31■□□□□ 0.84
TRAF4-204ENST00000422344 DGAT2L6Q6ZPD8 337 aa20.31■□□□□ 0.84
TRAF4-204ENST00000422344 CPSF7Q8N684 471 aaKnown RBP20.31■□□□□ 0.84
TRAF4-204ENST00000422344 C1orf52Q8N6N3 182 aaKnown RBP20.31■□□□□ 0.84
TRAF4-204ENST00000422344 OR4K14Q8NGD5 310 aa20.31■□□□□ 0.84
TRAF4-204ENST00000422344 GPR137Q96N19 417 aa20.31■□□□□ 0.84
TRAF4-204ENST00000422344 MID1IP1Q9NPA3 183 aa20.31■□□□□ 0.84
TRAF4-204ENST00000422344 ERVK-19Q9WJR5 959 aa20.31■□□□□ 0.84
TRAF4-204ENST00000422344 TRGV8A0A0C4DH27 118 aa20.3■□□□□ 0.84
TRAF4-204ENST00000422344 G3V2L1 256 aa20.3■□□□□ 0.84
TRAF4-204ENST00000422344 PGRMC2O15173 223 aa20.3■□□□□ 0.84
TRAF4-204ENST00000422344 PEX1O43933 1283 aa20.3■□□□□ 0.84
TRAF4-204ENST00000422344 PLIN3O60664 434 aa20.3■□□□□ 0.84
TRAF4-204ENST00000422344 OR6B1O95007 311 aa20.3■□□□□ 0.84
TRAF4-204ENST00000422344 ESRRBO95718 433 aa20.3■□□□□ 0.84
TRAF4-204ENST00000422344 IGKV3-11P04433 115 aa20.3■□□□□ 0.84
TRAF4-204ENST00000422344 GALNSP34059 522 aa20.3■□□□□ 0.84
TRAF4-204ENST00000422344 DEKP35659 375 aaKnown RBP20.3■□□□□ 0.84
TRAF4-204ENST00000422344 CASP6P55212 293 aa20.3■□□□□ 0.84
TRAF4-204ENST00000422344 GALNT1Q10472 559 aaPredicted RBP20.3■□□□□ 0.84
TRAF4-204ENST00000422344 TBL3Q12788 808 aaKnown RBP20.3■□□□□ 0.84
TRAF4-204ENST00000422344 OPN5Q6U736 354 aa20.3■□□□□ 0.84
TRAF4-204ENST00000422344 RNF111Q6ZNA4 994 aa20.3■□□□□ 0.84
TRAF4-204ENST00000422344 SH2D5Q6ZV89 423 aa20.3■□□□□ 0.84
TRAF4-204ENST00000422344 SLC29A4Q7RTT9 530 aa20.3■□□□□ 0.84
TRAF4-204ENST00000422344 MDGA2Q7Z553 956 aa20.3■□□□□ 0.84
TRAF4-204ENST00000422344 SULF2Q8IWU5 870 aa20.3■□□□□ 0.84
TRAF4-204ENST00000422344 C4orf33Q8N1A6 199 aa20.3■□□□□ 0.84
TRAF4-204ENST00000422344 RIBC1Q8N443 379 aaPredicted RBP20.3■□□□□ 0.84
TRAF4-204ENST00000422344 GBP7Q8N8V2 638 aaPredicted RBP20.3■□□□□ 0.84
TRAF4-204ENST00000422344 OR2W6PQ8NHA6 318 aa20.3■□□□□ 0.84
TRAF4-204ENST00000422344 NUBPLQ8TB37 319 aa20.3■□□□□ 0.84
TRAF4-204ENST00000422344 SLC22A8Q8TCC7 542 aa20.3■□□□□ 0.84
TRAF4-204ENST00000422344 DOK4Q8TEW6 326 aa20.3■□□□□ 0.84
TRAF4-204ENST00000422344 UCN3Q969E3 161 aa20.3■□□□□ 0.84
TRAF4-204ENST00000422344 MARVELD3Q96A59 401 aa20.3■□□□□ 0.84
TRAF4-204ENST00000422344 MAGED4Q96JG8 741 aa20.3■□□□□ 0.84
TRAF4-204ENST00000422344 FAIM2Q9BWQ8 316 aa20.3■□□□□ 0.84
TRAF4-204ENST00000422344 IQCGQ9H095 443 aaKnown RBP20.3■□□□□ 0.84
TRAF4-204ENST00000422344 GSTO2Q9H4Y5 243 aa20.3■□□□□ 0.84
TRAF4-204ENST00000422344 MID2Q9UJV3 735 aa20.3■□□□□ 0.84
TRAF4-204ENST00000422344 C1orf226A1L170 272 aa20.29■□□□□ 0.84
TRAF4-204ENST00000422344 HNRNPRO43390 633 aaKnown RBP20.29■□□□□ 0.84
TRAF4-204ENST00000422344 CRCPO75575 148 aa20.29■□□□□ 0.84
TRAF4-204ENST00000422344 CPA3P15088 417 aa20.29■□□□□ 0.84
TRAF4-204ENST00000422344 FAM219BQ5XKK7 198 aa20.29■□□□□ 0.84
TRAF4-204ENST00000422344 EMBQ6PCB8 327 aa20.29■□□□□ 0.84
TRAF4-204ENST00000422344 RTL4Q6ZR62 310 aa20.29■□□□□ 0.84
TRAF4-204ENST00000422344 FJX1Q86VR8 437 aa20.29■□□□□ 0.84
TRAF4-204ENST00000422344 PSD4Q8NDX1 1056 aa20.29■□□□□ 0.84
TRAF4-204ENST00000422344 AGAP11Q8TF27 550 aa20.29■□□□□ 0.84
TRAF4-204ENST00000422344 GAL3ST4Q96RP7 486 aa20.29■□□□□ 0.84
TRAF4-204ENST00000422344 PCDHA9Q9Y5H5 950 aa20.29■□□□□ 0.84
TRAF4-204ENST00000422344 GOLGA6L10A6NI86 522 aa20.28■□□□□ 0.84
TRAF4-204ENST00000422344 H3BQF6 201 aa20.28■□□□□ 0.84
TRAF4-204ENST00000422344 HRKO00198 91 aa20.28■□□□□ 0.84
TRAF4-204ENST00000422344 TFECO14948 347 aaPredicted RBP20.28■□□□□ 0.84
TRAF4-204ENST00000422344 ZG16O60844 167 aa20.28■□□□□ 0.84
TRAF4-204ENST00000422344 NUDT17P0C025 328 aa20.28■□□□□ 0.84
TRAF4-204ENST00000422344 PRF1P14222 555 aa20.28■□□□□ 0.84
TRAF4-204ENST00000422344 XKP51811 444 aa20.28■□□□□ 0.84
TRAF4-204ENST00000422344 NAGLUP54802 743 aa20.28■□□□□ 0.84
TRAF4-204ENST00000422344 GPR85P60893 370 aa20.28■□□□□ 0.84
TRAF4-204ENST00000422344 TRA2BP62995 288 aaKnown RBP20.28■□□□□ 0.84
TRAF4-204ENST00000422344 ASPHQ12797 758 aa20.28■□□□□ 0.84
TRAF4-204ENST00000422344 MPEG1Q2M385 716 aa20.28■□□□□ 0.84
TRAF4-204ENST00000422344 GALNT12Q8IXK2 581 aa20.28■□□□□ 0.84
TRAF4-204ENST00000422344 C9orf40Q8IXQ3 194 aa20.28■□□□□ 0.84
TRAF4-204ENST00000422344 NOL12Q9UGY1 213 aaKnown RBP eCLIP20.28■□□□□ 0.84
TRAF4-204ENST00000422344 PSME2Q9UL46 239 aa20.28■□□□□ 0.84
TRAF4-204ENST00000422344 TIMM22Q9Y584 194 aa20.28■□□□□ 0.84
TRAF4-204ENST00000422344 V9GYY5 206 aaPredicted RBP20.28■□□□□ 0.84
TRAF4-204ENST00000422344 OTOGQ6ZRI0 2925 aa20.27■□□□□ 0.84
TRAF4-204ENST00000422344 OR6C76A6NM76 312 aa20.27■□□□□ 0.84
TRAF4-204ENST00000422344 ASNA1O43681 348 aa20.27■□□□□ 0.84
TRAF4-204ENST00000422344 SLC19A2O60779 497 aa20.27■□□□□ 0.84
TRAF4-204ENST00000422344 CPMP14384 443 aa20.27■□□□□ 0.84
TRAF4-204ENST00000422344 NT5EP21589 574 aa20.27■□□□□ 0.84
TRAF4-204ENST00000422344 RFC3P40938 356 aa20.27■□□□□ 0.84
TRAF4-204ENST00000422344 ALDH9A1P49189 494 aa20.27■□□□□ 0.84
TRAF4-204ENST00000422344 HTR6P50406 440 aa20.27■□□□□ 0.84
TRAF4-204ENST00000422344 DNAJB13P59910 316 aa20.27■□□□□ 0.84
TRAF4-204ENST00000422344 ACSM2AQ08AH3 577 aa20.27■□□□□ 0.84
TRAF4-204ENST00000422344 SPIN4Q56A73 249 aa20.27■□□□□ 0.84
TRAF4-204ENST00000422344 PIGGQ5H8A4 983 aa20.27■□□□□ 0.84
TRAF4-204ENST00000422344 ACSM2BQ68CK6 577 aa20.27■□□□□ 0.84
TRAF4-204ENST00000422344 SP5Q6BEB4 398 aaPredicted RBP20.27■□□□□ 0.84
TRAF4-204ENST00000422344 SLC48A1Q6P1K1 146 aa20.27■□□□□ 0.84
TRAF4-204ENST00000422344 WDR93Q6P2C0 686 aa20.27■□□□□ 0.84
TRAF4-204ENST00000422344 FRMD7Q6ZUT3 714 aa20.27■□□□□ 0.84
TRAF4-204ENST00000422344 SIAH3Q8IW03 269 aa20.27■□□□□ 0.84
TRAF4-204ENST00000422344 GHDCQ8N2G8 530 aa20.27■□□□□ 0.84
TRAF4-204ENST00000422344 AENQ8WTP8 325 aaKnown RBP20.27■□□□□ 0.84
TRAF4-204ENST00000422344 CHTF18Q8WVB6 975 aa20.27■□□□□ 0.84
TRAF4-204ENST00000422344 SGCZQ96LD1 299 aa20.27■□□□□ 0.84
TRAF4-204ENST00000422344 KCNA7Q96RP8 456 aa20.27■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms