RNA–Protein interactions for RNA: ENST00000421887.2

SFXN1-202, Transcript of sideroflexin 1, humanhuman

TSL 4

Gene SFXN1, Length 551 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-202ENST00000421887 MSH3P20585 1137 aa4.54□□□□□ -1.68
SFXN1-202ENST00000421887 MMP8P22894 467 aa4.54□□□□□ -1.68
SFXN1-202ENST00000421887 PON1P27169 355 aa4.54□□□□□ -1.68
SFXN1-202ENST00000421887 AKT1P31749 480 aa4.54□□□□□ -1.68
SFXN1-202ENST00000421887 OR1D4P47884 311 aa4.54□□□□□ -1.68
SFXN1-202ENST00000421887 EEF1A2Q05639 463 aaKnown RBP4.54□□□□□ -1.68
SFXN1-202ENST00000421887 OR1C1Q15619 314 aa4.54□□□□□ -1.68
SFXN1-202ENST00000421887 CAMK4Q16566 473 aa4.54□□□□□ -1.68
SFXN1-202ENST00000421887 RNASE12Q5GAN4 147 aaKnown RBP4.54□□□□□ -1.68
SFXN1-202ENST00000421887 LDLRAP1Q5SW96 308 aa4.54□□□□□ -1.68
SFXN1-202ENST00000421887 FNBP1LQ5T0N5 605 aa4.54□□□□□ -1.68
SFXN1-202ENST00000421887 KIAA0930Q6ICG6 404 aaPredicted RBP4.54□□□□□ -1.68
SFXN1-202ENST00000421887 SPINK14Q6IE38 97 aa4.54□□□□□ -1.68
SFXN1-202ENST00000421887 DNAJC24Q6P3W2 148 aa4.54□□□□□ -1.68
SFXN1-202ENST00000421887 ARHGAP11AQ6P4F7 1023 aa4.54□□□□□ -1.68
SFXN1-202ENST00000421887 KDELC1Q6UW63 502 aa4.54□□□□□ -1.68
SFXN1-202ENST00000421887 FAM83HQ6ZRV2 1179 aaPredicted RBP4.54□□□□□ -1.68
SFXN1-202ENST00000421887 GALNTL5Q7Z4T8 443 aa4.54□□□□□ -1.68
SFXN1-202ENST00000421887 LRRC75A-AS1Q8N1F1 130 aa4.54□□□□□ -1.68
SFXN1-202ENST00000421887 MARVELD2Q8N4S9 558 aa4.54□□□□□ -1.68
SFXN1-202ENST00000421887 METTL27Q8N6F8 245 aaPredicted RBP4.54□□□□□ -1.68
SFXN1-202ENST00000421887 CCDC89Q8N998 374 aa4.54□□□□□ -1.68
SFXN1-202ENST00000421887 B4GALNT2Q8NHY0 566 aa4.54□□□□□ -1.68
SFXN1-202ENST00000421887 STT3BQ8TCJ2 826 aa4.54□□□□□ -1.68
SFXN1-202ENST00000421887 FAM222BQ8WU58 562 aa4.54□□□□□ -1.68
SFXN1-202ENST00000421887 NELFBQ8WX92 580 aa4.54□□□□□ -1.68
SFXN1-202ENST00000421887 MAML1Q92585 1016 aa4.54□□□□□ -1.68
SFXN1-202ENST00000421887 PIGTQ969N2 578 aa4.54□□□□□ -1.68
SFXN1-202ENST00000421887 ZNF479Q96JC4 524 aa4.54□□□□□ -1.68
SFXN1-202ENST00000421887 MCEEQ96PE7 176 aa4.54□□□□□ -1.68
SFXN1-202ENST00000421887 CCM2Q9BSQ5 444 aa4.54□□□□□ -1.68
SFXN1-202ENST00000421887 ZNF304Q9HCX3 659 aa4.54□□□□□ -1.68
SFXN1-202ENST00000421887 SLC22A11Q9NSA0 550 aa4.54□□□□□ -1.68
SFXN1-202ENST00000421887 ST6GALNAC1Q9NSC7 600 aaPredicted RBP4.54□□□□□ -1.68
SFXN1-202ENST00000421887 CUTCQ9NTM9 273 aa4.54□□□□□ -1.68
SFXN1-202ENST00000421887 TBC1D23Q9NUY8 699 aa4.54□□□□□ -1.68
SFXN1-202ENST00000421887 ANKRD10Q9NXR5 420 aa4.54□□□□□ -1.68
SFXN1-202ENST00000421887 ADAM22Q9P0K1 906 aa4.54□□□□□ -1.68
SFXN1-202ENST00000421887 RCOR1Q9UKL0 485 aa4.54□□□□□ -1.68
SFXN1-202ENST00000421887 MAU2Q9Y6X3 613 aa4.54□□□□□ -1.68
SFXN1-202ENST00000421887 DNAJC13O75165 2243 aa4.53□□□□□ -1.68
SFXN1-202ENST00000421887 IGHV1-45A0A0A0MS14 117 aa4.53□□□□□ -1.68
SFXN1-202ENST00000421887 A0A0J9YY10 115 aa4.53□□□□□ -1.68
SFXN1-202ENST00000421887 MBD3L4A6NDZ8 208 aaPredicted RBP4.53□□□□□ -1.68
SFXN1-202ENST00000421887 MBD3L3A6NE82 208 aaPredicted RBP4.53□□□□□ -1.68
SFXN1-202ENST00000421887 MGAT4DA6NG13 374 aa4.53□□□□□ -1.68
SFXN1-202ENST00000421887 TRIM64A6NGJ6 449 aa4.53□□□□□ -1.68
SFXN1-202ENST00000421887 TUBAL3A6NHL2 446 aa4.53□□□□□ -1.68
SFXN1-202ENST00000421887 TRIM64BA6NI03 449 aa4.53□□□□□ -1.68
SFXN1-202ENST00000421887 VSTM2BA6NLU5 285 aa4.53□□□□□ -1.68
SFXN1-202ENST00000421887 SIGLEC16A6NMB1 481 aa4.53□□□□□ -1.68
SFXN1-202ENST00000421887 H3BMH7 237 aa4.53□□□□□ -1.68
SFXN1-202ENST00000421887 MYO1CO00159 1063 aa4.53□□□□□ -1.68
SFXN1-202ENST00000421887 AP4M1O00189 453 aa4.53□□□□□ -1.68
SFXN1-202ENST00000421887 CLDN4O14493 209 aa4.53□□□□□ -1.68
SFXN1-202ENST00000421887 SPRY1O43609 319 aaPredicted RBP4.53□□□□□ -1.68
SFXN1-202ENST00000421887 DNAJB6O75190 326 aa4.53□□□□□ -1.68
SFXN1-202ENST00000421887 NDST3O95803 873 aa4.53□□□□□ -1.68
SFXN1-202ENST00000421887 HEXBP07686 556 aa4.53□□□□□ -1.68
SFXN1-202ENST00000421887 SP1P08047 785 aa4.53□□□□□ -1.68
SFXN1-202ENST00000421887 NGFRP08138 427 aa4.53□□□□□ -1.68
SFXN1-202ENST00000421887 UGT2B7P16662 529 aa4.53□□□□□ -1.68
SFXN1-202ENST00000421887 CNTFP26441 200 aa4.53□□□□□ -1.68
SFXN1-202ENST00000421887 SHMT2P34897 504 aa4.53□□□□□ -1.68
SFXN1-202ENST00000421887 TNNT3P45378 269 aaPredicted RBP4.53□□□□□ -1.68
SFXN1-202ENST00000421887 HCAR3P49019 387 aa4.53□□□□□ -1.68
SFXN1-202ENST00000421887 EMP2P54851 167 aa4.53□□□□□ -1.68
SFXN1-202ENST00000421887 NUP107P57740 925 aa4.53□□□□□ -1.68
SFXN1-202ENST00000421887 DMTNQ08495 405 aa4.53□□□□□ -1.68
SFXN1-202ENST00000421887 ITGA9Q13797 1035 aa4.53□□□□□ -1.68
SFXN1-202ENST00000421887 FASTKQ14296 549 aaKnown RBP4.53□□□□□ -1.68
SFXN1-202ENST00000421887 MEP1AQ16819 746 aa4.53□□□□□ -1.68
SFXN1-202ENST00000421887 BTBD16Q32M84 506 aa4.53□□□□□ -1.68
SFXN1-202ENST00000421887 SLC25A35Q3KQZ1 300 aa4.53□□□□□ -1.68
SFXN1-202ENST00000421887 CHRFAM7AQ494W8 412 aa4.53□□□□□ -1.68
SFXN1-202ENST00000421887 ATP13A5Q4VNC0 1218 aa4.53□□□□□ -1.68
SFXN1-202ENST00000421887 TCTE1Q5JU00 501 aa4.53□□□□□ -1.68
SFXN1-202ENST00000421887 ACER2Q5QJU3 275 aa4.53□□□□□ -1.68
SFXN1-202ENST00000421887 GPRC6AQ5T6X5 926 aa4.53□□□□□ -1.68
SFXN1-202ENST00000421887 ZDHHC20Q5W0Z9 365 aa4.53□□□□□ -1.68
SFXN1-202ENST00000421887 ISM2Q6H9L7 571 aa4.53□□□□□ -1.68
SFXN1-202ENST00000421887 RGS7BPQ6MZT1 257 aaPredicted RBP4.53□□□□□ -1.68
SFXN1-202ENST00000421887 FAM180BQ6P0A1 224 aa4.53□□□□□ -1.68
SFXN1-202ENST00000421887 PRSS57Q6UWY2 283 aa4.53□□□□□ -1.68
SFXN1-202ENST00000421887 UNC5DQ6UXZ4 953 aa4.53□□□□□ -1.68
SFXN1-202ENST00000421887 DEF8Q6ZN54 512 aa4.53□□□□□ -1.68
SFXN1-202ENST00000421887 COX15Q7KZN9 410 aa4.53□□□□□ -1.68
SFXN1-202ENST00000421887 DET1Q7L5Y6 550 aa4.53□□□□□ -1.68
SFXN1-202ENST00000421887 TRIM73Q86UV7 250 aa4.53□□□□□ -1.68
SFXN1-202ENST00000421887 ZNF677Q86XU0 584 aa4.53□□□□□ -1.68
SFXN1-202ENST00000421887 LRRC49Q8IUZ0 686 aa4.53□□□□□ -1.68
SFXN1-202ENST00000421887 SIAH3Q8IW03 269 aa4.53□□□□□ -1.68
SFXN1-202ENST00000421887 CFAP206Q8IYR0 622 aa4.53□□□□□ -1.68
SFXN1-202ENST00000421887 BEST3Q8N1M1 668 aa4.53□□□□□ -1.68
SFXN1-202ENST00000421887 RASGEF1AQ8N9B8 481 aa4.53□□□□□ -1.68
SFXN1-202ENST00000421887 OR52E1Q8NGJ3 308 aa4.53□□□□□ -1.68
SFXN1-202ENST00000421887 OR2L2Q8NH16 312 aa4.53□□□□□ -1.68
SFXN1-202ENST00000421887 FAM71BQ8TC56 605 aa4.53□□□□□ -1.68
SFXN1-202ENST00000421887 ZNF398Q8TD17 642 aa4.53□□□□□ -1.68
SFXN1-202ENST00000421887 ZDHHC19Q8WVZ1 309 aaPredicted RBP4.53□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms