RNA–Protein interactions for RNA: ENST00000420813.5

MSH6-203, Transcript of mutS homolog 6, humanhuman

TSL 4

Gene MSH6, Length 491 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-203ENST00000420813 CNPPD1Q9BV87 410 aa16.01■□□□□ 0.15
MSH6-203ENST00000420813 ERVK-6Q9BXR3 956 aa16.01■□□□□ 0.15
MSH6-203ENST00000420813 UCK2Q9BZX2 261 aa16.01■□□□□ 0.15
MSH6-203ENST00000420813 IPPKQ9H8X2 491 aa16.01■□□□□ 0.15
MSH6-203ENST00000420813 WDR41Q9HAD4 459 aa16.01■□□□□ 0.15
MSH6-203ENST00000420813 SLC24A3Q9HC58 644 aa16.01■□□□□ 0.15
MSH6-203ENST00000420813 CNIH4Q9P003 139 aa16.01■□□□□ 0.15
MSH6-203ENST00000420813 BOKQ9UMX3 212 aaPredicted RBP16.01■□□□□ 0.15
MSH6-203ENST00000420813 ERVK-19Q9WJR5 959 aa16.01■□□□□ 0.15
MSH6-203ENST00000420813 FAM215AQ9Y5M1 114 aa16.01■□□□□ 0.15
MSH6-203ENST00000420813 C2CD3Q4AC94 2353 aa16.01■□□□□ 0.15
MSH6-203ENST00000420813 A0A096LPK6 155 aa16■□□□□ 0.15
MSH6-203ENST00000420813 ATP6AP2A0A1C7CYW4 349 aa16■□□□□ 0.15
MSH6-203ENST00000420813 FOXE1O00358 373 aaPredicted RBP16■□□□□ 0.15
MSH6-203ENST00000420813 TMPRSS11DO60235 418 aa16■□□□□ 0.15
MSH6-203ENST00000420813 OR10H2O60403 315 aa16■□□□□ 0.15
MSH6-203ENST00000420813 EEDO75530 441 aaKnown RBP16■□□□□ 0.15
MSH6-203ENST00000420813 PRKRAO75569 313 aaKnown RBP16■□□□□ 0.15
MSH6-203ENST00000420813 ATP6AP2O75787 350 aa16■□□□□ 0.15
MSH6-203ENST00000420813 HOXD4P09016 255 aaPredicted RBP16■□□□□ 0.15
MSH6-203ENST00000420813 CELA3AP09093 270 aa16■□□□□ 0.15
MSH6-203ENST00000420813 FBXO45P0C2W1 286 aa16■□□□□ 0.15
MSH6-203ENST00000420813 SERPINB3P29508 390 aa16■□□□□ 0.15
MSH6-203ENST00000420813 PIGAP37287 484 aa16■□□□□ 0.15
MSH6-203ENST00000420813 SERPINB8P50452 374 aa16■□□□□ 0.15
MSH6-203ENST00000420813 CPSF6Q16630 551 aaKnown RBP eCLIP16■□□□□ 0.15
MSH6-203ENST00000420813 WLSQ5T9L3 541 aa16■□□□□ 0.15
MSH6-203ENST00000420813 CYP20A1Q6UW02 462 aa16■□□□□ 0.15
MSH6-203ENST00000420813 GOLGA7Q7Z5G4 137 aa16■□□□□ 0.15
MSH6-203ENST00000420813 NUDT13Q86X67 352 aa16■□□□□ 0.15
MSH6-203ENST00000420813 DMRTC2Q8IXT2 367 aaPredicted RBP16■□□□□ 0.15
MSH6-203ENST00000420813 WDR20Q8TBZ3 569 aa16■□□□□ 0.15
MSH6-203ENST00000420813 RIT1Q92963 219 aa16■□□□□ 0.15
MSH6-203ENST00000420813 GPR78Q96P69 363 aa16■□□□□ 0.15
MSH6-203ENST00000420813 WWTR1Q9GZV5 400 aa16■□□□□ 0.15
MSH6-203ENST00000420813 LDAHQ9H6V9 325 aa16■□□□□ 0.15
MSH6-203ENST00000420813 ZNF703Q9H7S9 590 aaPredicted RBP16■□□□□ 0.15
MSH6-203ENST00000420813 ZFP64Q9NPA5 681 aa16■□□□□ 0.15
MSH6-203ENST00000420813 SEMA4BQ9NPR2 832 aaPredicted RBP16■□□□□ 0.15
MSH6-203ENST00000420813 QPCTLQ9NXS2 382 aa16■□□□□ 0.15
MSH6-203ENST00000420813 KCNN3Q9UGI6 736 aa16■□□□□ 0.15
MSH6-203ENST00000420813 ITGB1BP2Q9UKP3 347 aa16■□□□□ 0.15
MSH6-203ENST00000420813 ACAD8Q9UKU7 415 aa16■□□□□ 0.15
MSH6-203ENST00000420813 PCDHGB3Q9Y5G1 929 aa16■□□□□ 0.15
MSH6-203ENST00000420813 TRGV5A0A0B4J1U4 118 aa15.99■□□□□ 0.15
MSH6-203ENST00000420813 A0A1W2PR48 441 aa15.99■□□□□ 0.15
MSH6-203ENST00000420813 LRRC14BA6NHZ5 514 aa15.99■□□□□ 0.15
MSH6-203ENST00000420813 FAM47E-STBD1D6RA91 191 aa15.99■□□□□ 0.15
MSH6-203ENST00000420813 SEMA3DO95025 777 aa15.99■□□□□ 0.15
MSH6-203ENST00000420813 ALDOAP04075 364 aaKnown RBP15.99■□□□□ 0.15
MSH6-203ENST00000420813 FAM58BPP0C7Q3 252 aa15.99■□□□□ 0.15
MSH6-203ENST00000420813 GLI4P10075 376 aa15.99■□□□□ 0.15
MSH6-203ENST00000420813 GABRA1P14867 456 aa15.99■□□□□ 0.15
MSH6-203ENST00000420813 TYK2P29597 1187 aa15.99■□□□□ 0.15
MSH6-203ENST00000420813 PHBP35232 272 aa15.99■□□□□ 0.15
MSH6-203ENST00000420813 ZFP36L2P47974 494 aaKnown RBP15.99■□□□□ 0.15
MSH6-203ENST00000420813 SLC37A1P57057 533 aa15.99■□□□□ 0.15
MSH6-203ENST00000420813 KCNJ2P63252 427 aa15.99■□□□□ 0.15
MSH6-203ENST00000420813 ZNF267Q14586 743 aaPredicted RBP15.99■□□□□ 0.15
MSH6-203ENST00000420813 EBPQ15125 230 aaKnown RBP15.99■□□□□ 0.15
MSH6-203ENST00000420813 TESK1Q15569 626 aa15.99■□□□□ 0.15
MSH6-203ENST00000420813 TECRLQ5HYJ1 363 aa15.99■□□□□ 0.15
MSH6-203ENST00000420813 RTL6Q6ICC9 239 aa15.99■□□□□ 0.15
MSH6-203ENST00000420813 OR52E8Q6IFG1 317 aa15.99■□□□□ 0.15
MSH6-203ENST00000420813 SYT10Q6XYQ8 523 aa15.99■□□□□ 0.15
MSH6-203ENST00000420813 LRRC25Q8N386 305 aaPredicted RBP15.99■□□□□ 0.15
MSH6-203ENST00000420813 GAL3ST4Q96RP7 486 aa15.99■□□□□ 0.15
MSH6-203ENST00000420813 ZDHHC18Q9NUE0 388 aa15.99■□□□□ 0.15
MSH6-203ENST00000420813 CPSF2Q9P2I0 782 aaKnown RBP15.99■□□□□ 0.15
MSH6-203ENST00000420813 CHCHD2Q9Y6H1 151 aaPredicted RBP15.99■□□□□ 0.15
MSH6-203ENST00000420813 SIX3O95343 332 aaPredicted RBP15.98■□□□□ 0.15
MSH6-203ENST00000420813 CLDN9O95484 217 aa15.98■□□□□ 0.15
MSH6-203ENST00000420813 AIFM1O95831 613 aa15.98■□□□□ 0.15
MSH6-203ENST00000420813 SLC35E2P0CK97 266 aa15.98■□□□□ 0.15
MSH6-203ENST00000420813 ENDOUP21128 410 aaKnown RBP15.98■□□□□ 0.15
MSH6-203ENST00000420813 UAP1Q16222 522 aaPredicted RBP15.98■□□□□ 0.15
MSH6-203ENST00000420813 NTRK2Q16620 822 aa15.98■□□□□ 0.15
MSH6-203ENST00000420813 TBCELQ5QJ74 424 aa15.98■□□□□ 0.15
MSH6-203ENST00000420813 C10orf62Q5T681 223 aaPredicted RBP15.98■□□□□ 0.15
MSH6-203ENST00000420813 C1orf185Q5T7R7 199 aa15.98■□□□□ 0.15
MSH6-203ENST00000420813 PRAMEF20Q5VT98 475 aa15.98■□□□□ 0.15
MSH6-203ENST00000420813 C8orf74Q6P047 294 aa15.98■□□□□ 0.15
MSH6-203ENST00000420813 CLYBLQ8N0X4 340 aa15.98■□□□□ 0.15
MSH6-203ENST00000420813 FAM13CQ8NE31 585 aa15.98■□□□□ 0.15
MSH6-203ENST00000420813 OR10G3Q8NGC4 313 aa15.98■□□□□ 0.15
MSH6-203ENST00000420813 OR10Q1Q8NGQ4 319 aa15.98■□□□□ 0.15
MSH6-203ENST00000420813 MRRFQ96E11 262 aaKnown RBP15.98■□□□□ 0.15
MSH6-203ENST00000420813 SERPINI1Q99574 410 aa15.98■□□□□ 0.15
MSH6-203ENST00000420813 ACSS3Q9H6R3 686 aa15.98■□□□□ 0.15
MSH6-203ENST00000420813 EXO5Q9H790 373 aa15.98■□□□□ 0.15
MSH6-203ENST00000420813 PROK2Q9HC23 129 aa15.98■□□□□ 0.15
MSH6-203ENST00000420813 ACKR4Q9NPB9 350 aa15.98■□□□□ 0.15
MSH6-203ENST00000420813 TNFRSF10DQ9UBN6 386 aa15.98■□□□□ 0.15
MSH6-203ENST00000420813 CNOT11Q9UKZ1 510 aaKnown RBP15.98■□□□□ 0.15
MSH6-203ENST00000420813 TMCO1Q9UM00 188 aa15.98■□□□□ 0.15
MSH6-203ENST00000420813 RNF11Q9Y3C5 154 aa15.98■□□□□ 0.15
MSH6-203ENST00000420813 ANKHD1Q8IWZ3 2542 aaKnown RBP15.97■□□□□ 0.15
MSH6-203ENST00000420813 A0A0G2JNJ9 132 aa15.97■□□□□ 0.15
MSH6-203ENST00000420813 ESYT3A0FGR9 886 aa15.97■□□□□ 0.15
MSH6-203ENST00000420813 ANKRD33BA6NCL7 494 aa15.97■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms