RNA–Protein interactions for RNA: ENST00000420121.5

SSBP3-206, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 3

Gene SSBP3, Length 593 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-206ENST00000420121 CLDN14O95500 239 aa10.19□□□□□ -0.78
SSBP3-206ENST00000420121 IGHG3P01860 377 aa10.19□□□□□ -0.78
SSBP3-206ENST00000420121 ABHD2P08910 425 aa10.19□□□□□ -0.78
SSBP3-206ENST00000420121 COX7A2P14406 83 aa10.19□□□□□ -0.78
SSBP3-206ENST00000420121 CNR1P21554 472 aa10.19□□□□□ -0.78
SSBP3-206ENST00000420121 CNTFP26441 200 aa10.19□□□□□ -0.78
SSBP3-206ENST00000420121 SOX18P35713 384 aa10.19□□□□□ -0.78
SSBP3-206ENST00000420121 BUD31P41223 144 aaPredicted RBP10.19□□□□□ -0.78
SSBP3-206ENST00000420121 KIR3DL1P43629 444 aa10.19□□□□□ -0.78
SSBP3-206ENST00000420121 DNASE1L1P49184 302 aa10.19□□□□□ -0.78
SSBP3-206ENST00000420121 CCNG1P51959 295 aa10.19□□□□□ -0.78
SSBP3-206ENST00000420121 PPIAP62937 165 aaKnown RBP10.19□□□□□ -0.78
SSBP3-206ENST00000420121 HERVK_113P63132 956 aa10.19□□□□□ -0.78
SSBP3-206ENST00000420121 ERVK-8P63133 956 aa10.19□□□□□ -0.78
SSBP3-206ENST00000420121 EBPQ15125 230 aaKnown RBP10.19□□□□□ -0.78
SSBP3-206ENST00000420121 HYAL4Q2M3T9 481 aa10.19□□□□□ -0.78
SSBP3-206ENST00000420121 FRG2Q64ET8 278 aa10.19□□□□□ -0.78
SSBP3-206ENST00000420121 LETMD1Q6P1Q0 360 aa10.19□□□□□ -0.78
SSBP3-206ENST00000420121 OPN5Q6U736 354 aa10.19□□□□□ -0.78
SSBP3-206ENST00000420121 MCEMP1Q8IX19 187 aa10.19□□□□□ -0.78
SSBP3-206ENST00000420121 TMEM251Q8N6I4 163 aa10.19□□□□□ -0.78
SSBP3-206ENST00000420121 ZNF441Q8N8Z8 693 aa10.19□□□□□ -0.78
SSBP3-206ENST00000420121 C7orf57Q8NEG2 295 aa10.19□□□□□ -0.78
SSBP3-206ENST00000420121 RBM18Q96H35 190 aaKnown RBP10.19□□□□□ -0.78
SSBP3-206ENST00000420121 SGCZQ96LD1 299 aa10.19□□□□□ -0.78
SSBP3-206ENST00000420121 FRG2BQ96QU4 278 aa10.19□□□□□ -0.78
SSBP3-206ENST00000420121 SERPINI1Q99574 410 aa10.19□□□□□ -0.78
SSBP3-206ENST00000420121 MRPL57Q9BQC6 102 aaKnown RBP10.19□□□□□ -0.78
SSBP3-206ENST00000420121 CENPKQ9BS16 269 aa10.19□□□□□ -0.78
SSBP3-206ENST00000420121 ERVK-6Q9BXR3 956 aa10.19□□□□□ -0.78
SSBP3-206ENST00000420121 MRPL1Q9BYD6 325 aaKnown RBP10.19□□□□□ -0.78
SSBP3-206ENST00000420121 TXLNGYQ9BZA5 131 aa10.19□□□□□ -0.78
SSBP3-206ENST00000420121 WWTR1Q9GZV5 400 aa10.19□□□□□ -0.78
SSBP3-206ENST00000420121 DEFB127Q9H1M4 99 aa10.19□□□□□ -0.78
SSBP3-206ENST00000420121 MRPL46Q9H2W6 279 aaKnown RBP10.19□□□□□ -0.78
SSBP3-206ENST00000420121 FARSBQ9NSD9 589 aaKnown RBP10.19□□□□□ -0.78
SSBP3-206ENST00000420121 TUBA8Q9NY65 449 aaPredicted RBP10.19□□□□□ -0.78
SSBP3-206ENST00000420121 NFU1Q9UMS0 254 aa10.19□□□□□ -0.78
SSBP3-206ENST00000420121 ERVK-19Q9WJR5 959 aa10.19□□□□□ -0.78
SSBP3-206ENST00000420121 INTS1Q8N201 2190 aaKnown RBP10.19□□□□□ -0.78
SSBP3-206ENST00000420121 AKAP9Q99996 3911 aa10.19□□□□□ -0.78
SSBP3-206ENST00000420121 SMIM24O75264 130 aa10.18□□□□□ -0.78
SSBP3-206ENST00000420121 TPOP07202 933 aa10.18□□□□□ -0.78
SSBP3-206ENST00000420121 SNRPAP09012 282 aaKnown RBP10.18□□□□□ -0.78
SSBP3-206ENST00000420121 CELA3AP09093 270 aa10.18□□□□□ -0.78
SSBP3-206ENST00000420121 CT62P0C5K7 136 aa10.18□□□□□ -0.78
SSBP3-206ENST00000420121 FAM153BP0C7A2 387 aa10.18□□□□□ -0.78
SSBP3-206ENST00000420121 SLC35E2P0CK97 266 aa10.18□□□□□ -0.78
SSBP3-206ENST00000420121 TSPAN8P19075 237 aa10.18□□□□□ -0.78
SSBP3-206ENST00000420121 TNFRSF8P28908 595 aa10.18□□□□□ -0.78
SSBP3-206ENST00000420121 TLX1P31314 330 aaPredicted RBP10.18□□□□□ -0.78
SSBP3-206ENST00000420121 GALNSP34059 522 aa10.18□□□□□ -0.78
SSBP3-206ENST00000420121 MAGEA5P43359 124 aa10.18□□□□□ -0.78
SSBP3-206ENST00000420121 SMSP52788 366 aa10.18□□□□□ -0.78
SSBP3-206ENST00000420121 CDH13P55290 713 aa10.18□□□□□ -0.78
SSBP3-206ENST00000420121 PHEXP78562 749 aa10.18□□□□□ -0.78
SSBP3-206ENST00000420121 GALNT1Q10472 559 aaPredicted RBP10.18□□□□□ -0.78
SSBP3-206ENST00000420121 ZNF267Q14586 743 aaPredicted RBP10.18□□□□□ -0.78
SSBP3-206ENST00000420121 FAM153CQ494X1 144 aa10.18□□□□□ -0.78
SSBP3-206ENST00000420121 OR52E8Q6IFG1 317 aa10.18□□□□□ -0.78
SSBP3-206ENST00000420121 ARHGAP11AQ6P4F7 1023 aa10.18□□□□□ -0.78
SSBP3-206ENST00000420121 CYP20A1Q6UW02 462 aa10.18□□□□□ -0.78
SSBP3-206ENST00000420121 TIFABQ6ZNK6 161 aa10.18□□□□□ -0.78
SSBP3-206ENST00000420121 TAOK1Q7L7X3 1001 aa10.18□□□□□ -0.78
SSBP3-206ENST00000420121 ZNF295-AS1Q8N0V1 137 aa10.18□□□□□ -0.78
SSBP3-206ENST00000420121 METTL4Q8N3J2 472 aa10.18□□□□□ -0.78
SSBP3-206ENST00000420121 LRRN4CLQ8ND94 238 aa10.18□□□□□ -0.78
SSBP3-206ENST00000420121 MYRIPQ8NFW9 859 aa10.18□□□□□ -0.78
SSBP3-206ENST00000420121 PAQR8Q8TEZ7 354 aa10.18□□□□□ -0.78
SSBP3-206ENST00000420121 MZB1Q8WU39 189 aa10.18□□□□□ -0.78
SSBP3-206ENST00000420121 SPACA9Q96E40 222 aaPredicted RBP10.18□□□□□ -0.78
SSBP3-206ENST00000420121 ART5Q96L15 291 aa10.18□□□□□ -0.78
SSBP3-206ENST00000420121 FAM173AQ9BQD7 235 aa10.18□□□□□ -0.78
SSBP3-206ENST00000420121 PELOQ9BRX2 385 aaKnown RBP10.18□□□□□ -0.78
SSBP3-206ENST00000420121 CNPPD1Q9BV87 410 aa10.18□□□□□ -0.78
SSBP3-206ENST00000420121 TRIM8Q9BZR9 551 aa10.18□□□□□ -0.78
SSBP3-206ENST00000420121 CXorf21Q9HAI6 301 aa10.18□□□□□ -0.78
SSBP3-206ENST00000420121 CHST11Q9NPF2 352 aa10.18□□□□□ -0.78
SSBP3-206ENST00000420121 NPDC1Q9NQX5 325 aaPredicted RBP10.18□□□□□ -0.78
SSBP3-206ENST00000420121 SACM1LQ9NTJ5 587 aa10.18□□□□□ -0.78
SSBP3-206ENST00000420121 TMEM216Q9P0N5 145 aa10.18□□□□□ -0.78
SSBP3-206ENST00000420121 ADAM29Q9UKF5 820 aa10.18□□□□□ -0.78
SSBP3-206ENST00000420121 CES1P1Q9UKY3 287 aa10.18□□□□□ -0.78
SSBP3-206ENST00000420121 CHCHD2Q9Y6H1 151 aaPredicted RBP10.18□□□□□ -0.78
SSBP3-206ENST00000420121 IKBKGQ9Y6K9 419 aa10.18□□□□□ -0.78
SSBP3-206ENST00000420121 A0A1B0GVC2 190 aa10.17□□□□□ -0.78
SSBP3-206ENST00000420121 EXOC1LA0A1B0GW35 172 aa10.17□□□□□ -0.78
SSBP3-206ENST00000420121 LRRC3CA6NJW4 275 aa10.17□□□□□ -0.78
SSBP3-206ENST00000420121 RIPK2O43353 540 aa10.17□□□□□ -0.78
SSBP3-206ENST00000420121 PDYNP01213 254 aa10.17□□□□□ -0.78
SSBP3-206ENST00000420121 KLK1P06870 262 aa10.17□□□□□ -0.78
SSBP3-206ENST00000420121 FBXO45P0C2W1 286 aa10.17□□□□□ -0.78
SSBP3-206ENST00000420121 RFPL3SP0C7P2 107 aa10.17□□□□□ -0.78
SSBP3-206ENST00000420121 ENDOUP21128 410 aaKnown RBP10.17□□□□□ -0.78
SSBP3-206ENST00000420121 S1PR1P21453 382 aa10.17□□□□□ -0.78
SSBP3-206ENST00000420121 SSTR4P31391 388 aa10.17□□□□□ -0.78
SSBP3-206ENST00000420121 HSD17B3P37058 310 aa10.17□□□□□ -0.78
SSBP3-206ENST00000420121 PIGAP37287 484 aa10.17□□□□□ -0.78
SSBP3-206ENST00000420121 PLGLB1Q02325 96 aa10.17□□□□□ -0.78
SSBP3-206ENST00000420121 DUSP2Q05923 314 aa10.17□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms