RNA–Protein interactions for RNA: ENST00000420009.5

TNFAIP3-202, Transcript of TNF alpha induced protein 3, humanhuman

TSL 3

Gene TNFAIP3, Length 698 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-202ENST00000420009 SYDE1Q6ZW31 735 aaPredicted RBP9.33□□□□□ -0.92
TNFAIP3-202ENST00000420009 P3H2Q8IVL5 708 aa9.33□□□□□ -0.92
TNFAIP3-202ENST00000420009 IGDCC3Q8IVU1 814 aa9.33□□□□□ -0.92
TNFAIP3-202ENST00000420009 NKAPQ8N5F7 415 aaKnown RBP9.33□□□□□ -0.92
TNFAIP3-202ENST00000420009 C9orf106Q8NAJ2 232 aa9.33□□□□□ -0.92
TNFAIP3-202ENST00000420009 BBOF1Q8ND07 529 aa9.33□□□□□ -0.92
TNFAIP3-202ENST00000420009 MAGOHBQ96A72 148 aaKnown RBP9.33□□□□□ -0.92
TNFAIP3-202ENST00000420009 WDYHV1Q96HA8 205 aa9.33□□□□□ -0.92
TNFAIP3-202ENST00000420009 ART5Q96L15 291 aa9.33□□□□□ -0.92
TNFAIP3-202ENST00000420009 Q96MF0 132 aa9.33□□□□□ -0.92
TNFAIP3-202ENST00000420009 DGAT2Q96PD7 388 aa9.33□□□□□ -0.92
TNFAIP3-202ENST00000420009 TRIB1Q96RU8 372 aa9.33□□□□□ -0.92
TNFAIP3-202ENST00000420009 TMEM79Q9BSE2 394 aa9.33□□□□□ -0.92
TNFAIP3-202ENST00000420009 TBCDQ9BTW9 1192 aa9.33□□□□□ -0.92
TNFAIP3-202ENST00000420009 RBM24Q9BX46 236 aaKnown RBP9.33□□□□□ -0.92
TNFAIP3-202ENST00000420009 CAPS2Q9BXY5 557 aa9.33□□□□□ -0.92
TNFAIP3-202ENST00000420009 MS4A8Q9BY19 250 aa9.33□□□□□ -0.92
TNFAIP3-202ENST00000420009 UGT2B28Q9BY64 529 aa9.33□□□□□ -0.92
TNFAIP3-202ENST00000420009 ROGDIQ9GZN7 287 aa9.33□□□□□ -0.92
TNFAIP3-202ENST00000420009 WWTR1Q9GZV5 400 aa9.33□□□□□ -0.92
TNFAIP3-202ENST00000420009 CALHM2Q9HA72 323 aa9.33□□□□□ -0.92
TNFAIP3-202ENST00000420009 SDAD1Q9NVU7 687 aaKnown RBP eCLIP9.33□□□□□ -0.92
TNFAIP3-202ENST00000420009 C15orf41Q9Y2V0 281 aa9.33□□□□□ -0.92
TNFAIP3-202ENST00000420009 RTCAO00442 366 aaKnown RBP9.32□□□□□ -0.92
TNFAIP3-202ENST00000420009 DYRK3O43781 588 aa9.32□□□□□ -0.92
TNFAIP3-202ENST00000420009 SMPD2O60906 423 aa9.32□□□□□ -0.92
TNFAIP3-202ENST00000420009 ERN1O75460 977 aaKnown RBP9.32□□□□□ -0.92
TNFAIP3-202ENST00000420009 CLPSP04118 112 aa9.32□□□□□ -0.92
TNFAIP3-202ENST00000420009 TMIGD3P0DMS9 266 aaPredicted RBP9.32□□□□□ -0.92
TNFAIP3-202ENST00000420009 BMP7P18075 431 aa9.32□□□□□ -0.92
TNFAIP3-202ENST00000420009 SOX18P35713 384 aa9.32□□□□□ -0.92
TNFAIP3-202ENST00000420009 GGT5P36269 586 aa9.32□□□□□ -0.92
TNFAIP3-202ENST00000420009 MSH2P43246 934 aa9.32□□□□□ -0.92
TNFAIP3-202ENST00000420009 SLC37A1P57057 533 aa9.32□□□□□ -0.92
TNFAIP3-202ENST00000420009 HERVK_113P63132 956 aa9.32□□□□□ -0.92
TNFAIP3-202ENST00000420009 ERVK-8P63133 956 aa9.32□□□□□ -0.92
TNFAIP3-202ENST00000420009 FOXF2Q12947 444 aa9.32□□□□□ -0.92
TNFAIP3-202ENST00000420009 DOC2AQ14183 400 aa9.32□□□□□ -0.92
TNFAIP3-202ENST00000420009 E2F2Q14209 437 aa9.32□□□□□ -0.92
TNFAIP3-202ENST00000420009 ZNF460Q14592 562 aa9.32□□□□□ -0.92
TNFAIP3-202ENST00000420009 RPS6KA2Q15349 733 aa9.32□□□□□ -0.92
TNFAIP3-202ENST00000420009 SPRED3Q2MJR0 410 aa9.32□□□□□ -0.92
TNFAIP3-202ENST00000420009 BICRALQ6AI39 1079 aa9.32□□□□□ -0.92
TNFAIP3-202ENST00000420009 TRMT10BQ6PF06 316 aaKnown RBP9.32□□□□□ -0.92
TNFAIP3-202ENST00000420009 CCDC137Q6PK04 289 aaKnown RBP9.32□□□□□ -0.92
TNFAIP3-202ENST00000420009 ZNF662Q6ZS27 426 aa9.32□□□□□ -0.92
TNFAIP3-202ENST00000420009 FRA10AC1Q70Z53 315 aa9.32□□□□□ -0.92
TNFAIP3-202ENST00000420009 SLC29A4Q7RTT9 530 aa9.32□□□□□ -0.92
TNFAIP3-202ENST00000420009 OR4N5Q8IXE1 308 aa9.32□□□□□ -0.92
TNFAIP3-202ENST00000420009 ZNF441Q8N8Z8 693 aa9.32□□□□□ -0.92
TNFAIP3-202ENST00000420009 LRRN4CLQ8ND94 238 aa9.32□□□□□ -0.92
TNFAIP3-202ENST00000420009 SRFBP1Q8NEF9 429 aaKnown RBP9.32□□□□□ -0.92
TNFAIP3-202ENST00000420009 ANKRD49Q8WVL7 239 aa9.32□□□□□ -0.92
TNFAIP3-202ENST00000420009 DIO2Q92813 273 aa9.32□□□□□ -0.92
TNFAIP3-202ENST00000420009 PIGTQ969N2 578 aa9.32□□□□□ -0.92
TNFAIP3-202ENST00000420009 PPWD1Q96BP3 646 aaKnown RBP9.32□□□□□ -0.92
TNFAIP3-202ENST00000420009 PTCD3Q96EY7 689 aaKnown RBP9.32□□□□□ -0.92
TNFAIP3-202ENST00000420009 RILPQ96NA2 401 aa9.32□□□□□ -0.92
TNFAIP3-202ENST00000420009 GAL3ST4Q96RP7 486 aa9.32□□□□□ -0.92
TNFAIP3-202ENST00000420009 BDH2Q9BUT1 245 aa9.32□□□□□ -0.92
TNFAIP3-202ENST00000420009 EFCAB11Q9BUY7 163 aa9.32□□□□□ -0.92
TNFAIP3-202ENST00000420009 SFXN3Q9BWM7 321 aa9.32□□□□□ -0.92
TNFAIP3-202ENST00000420009 ERVK-6Q9BXR3 956 aa9.32□□□□□ -0.92
TNFAIP3-202ENST00000420009 CAMK2AQ9UQM7 478 aa9.32□□□□□ -0.92
TNFAIP3-202ENST00000420009 ERVK-19Q9WJR5 959 aa9.32□□□□□ -0.92
TNFAIP3-202ENST00000420009 SLC6A5Q9Y345 797 aa9.32□□□□□ -0.92
TNFAIP3-202ENST00000420009 TESMINQ9Y4I5 508 aa9.32□□□□□ -0.92
TNFAIP3-202ENST00000420009 SPACA6W5XKT8 324 aa9.32□□□□□ -0.92
TNFAIP3-202ENST00000420009 CUBNO60494 3623 aa9.32□□□□□ -0.92
TNFAIP3-202ENST00000420009 DOCK7Q96N67 2140 aa9.31□□□□□ -0.92
TNFAIP3-202ENST00000420009 FAM187AA6NFU0 413 aa9.31□□□□□ -0.92
TNFAIP3-202ENST00000420009 TRIM64A6NGJ6 449 aa9.31□□□□□ -0.92
TNFAIP3-202ENST00000420009 TRIM64BA6NI03 449 aa9.31□□□□□ -0.92
TNFAIP3-202ENST00000420009 OR6C76A6NM76 312 aa9.31□□□□□ -0.92
TNFAIP3-202ENST00000420009 ST8SIA5O15466 376 aa9.31□□□□□ -0.92
TNFAIP3-202ENST00000420009 TAPBPO15533 448 aa9.31□□□□□ -0.92
TNFAIP3-202ENST00000420009 SIAH2O43255 324 aa9.31□□□□□ -0.92
TNFAIP3-202ENST00000420009 TRAPPC6AO75865 159 aa9.31□□□□□ -0.92
TNFAIP3-202ENST00000420009 SNX4O95219 450 aa9.31□□□□□ -0.92
TNFAIP3-202ENST00000420009 ACSL3O95573 720 aa9.31□□□□□ -0.92
TNFAIP3-202ENST00000420009 ALOX15P16050 662 aaPredicted RBP9.31□□□□□ -0.92
TNFAIP3-202ENST00000420009 EPORP19235 508 aa9.31□□□□□ -0.92
TNFAIP3-202ENST00000420009 CPN2P22792 545 aa9.31□□□□□ -0.92
TNFAIP3-202ENST00000420009 SLCO1A2P46721 670 aa9.31□□□□□ -0.92
TNFAIP3-202ENST00000420009 TAS2R39P59534 338 aa9.31□□□□□ -0.92
TNFAIP3-202ENST00000420009 PPP2R2BQ00005 443 aa9.31□□□□□ -0.92
TNFAIP3-202ENST00000420009 TGFBIQ15582 683 aa9.31□□□□□ -0.92
TNFAIP3-202ENST00000420009 TMEM35AQ53FP2 167 aa9.31□□□□□ -0.92
TNFAIP3-202ENST00000420009 EIPR1Q53HC9 387 aa9.31□□□□□ -0.92
TNFAIP3-202ENST00000420009 RNF111Q6ZNA4 994 aa9.31□□□□□ -0.92
TNFAIP3-202ENST00000420009 YTHDF3Q7Z739 585 aaKnown RBP9.31□□□□□ -0.92
TNFAIP3-202ENST00000420009 ADGRE4PQ86SQ3 457 aa9.31□□□□□ -0.92
TNFAIP3-202ENST00000420009 ZC3HC1Q86WB0 502 aaKnown RBP9.31□□□□□ -0.92
TNFAIP3-202ENST00000420009 ST13P4Q8IZP2 240 aaPredicted RBP9.31□□□□□ -0.92
TNFAIP3-202ENST00000420009 TCAIMQ8N3R3 496 aa9.31□□□□□ -0.92
TNFAIP3-202ENST00000420009 SPPL2AQ8TCT8 520 aa9.31□□□□□ -0.92
TNFAIP3-202ENST00000420009 ZPLD1Q8TCW7 415 aa9.31□□□□□ -0.92
TNFAIP3-202ENST00000420009 ZNF473Q8WTR7 871 aaKnown RBP9.31□□□□□ -0.92
TNFAIP3-202ENST00000420009 VPS39Q96JC1 886 aa9.31□□□□□ -0.92
TNFAIP3-202ENST00000420009 ZFP3Q96NJ6 502 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms