RNA–Protein interactions for RNA: ENST00000418882.2

HMGB1P49-201, Transcript of high mobility group box 1 pseudogene 49, humanhuman

BASIC

Gene HMGB1P49, Length 569 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P49-201ENST00000418882 GK2Q14410 553 aaPredicted RBP3.25□□□□□ -1.89
HMGB1P49-201ENST00000418882 SLMAPQ14BN4 828 aa3.25□□□□□ -1.89
HMGB1P49-201ENST00000418882 CGB2Q6NT52 195 aa3.25□□□□□ -1.89
HMGB1P49-201ENST00000418882 PAMR1Q6UXH9 720 aa3.25□□□□□ -1.89
HMGB1P49-201ENST00000418882 ZNF600Q6ZNG1 722 aa3.25□□□□□ -1.89
HMGB1P49-201ENST00000418882 GET4Q7L5D6 327 aaPredicted RBP3.25□□□□□ -1.89
HMGB1P49-201ENST00000418882 KRTAP11-1Q8IUC1 163 aa3.25□□□□□ -1.89
HMGB1P49-201ENST00000418882 ZBED8Q8IZ13 594 aa3.25□□□□□ -1.89
HMGB1P49-201ENST00000418882 SLC22A18ASQ8N1D0 253 aa3.25□□□□□ -1.89
HMGB1P49-201ENST00000418882 ZNF671Q8TAW3 534 aa3.25□□□□□ -1.89
HMGB1P49-201ENST00000418882 JPH2Q9BR39 696 aaPredicted RBP3.25□□□□□ -1.89
HMGB1P49-201ENST00000418882 GDF3Q9NR23 364 aa3.25□□□□□ -1.89
HMGB1P49-201ENST00000418882 B4GALT7Q9UBV7 327 aa3.25□□□□□ -1.89
HMGB1P49-201ENST00000418882 MLXQ9UH92 298 aa3.25□□□□□ -1.89
HMGB1P49-201ENST00000418882 EXOC7Q9UPT5 735 aa3.25□□□□□ -1.89
HMGB1P49-201ENST00000418882 RNF24Q9Y225 148 aa3.25□□□□□ -1.89
HMGB1P49-201ENST00000418882 C5orf51A6NDU8 294 aa3.24□□□□□ -1.89
HMGB1P49-201ENST00000418882 ZSCAN5CA6NGD5 496 aaPredicted RBP3.24□□□□□ -1.89
HMGB1P49-201ENST00000418882 PSMA7O14818 248 aa3.24□□□□□ -1.89
HMGB1P49-201ENST00000418882 PSMD3O43242 534 aa3.24□□□□□ -1.89
HMGB1P49-201ENST00000418882 TXNDC12O95881 172 aa3.24□□□□□ -1.89
HMGB1P49-201ENST00000418882 FCGR3AP08637 254 aa3.24□□□□□ -1.89
HMGB1P49-201ENST00000418882 TPBGLP0DKB5 382 aa3.24□□□□□ -1.89
HMGB1P49-201ENST00000418882 CT45A8P0DMV1 189 aa3.24□□□□□ -1.89
HMGB1P49-201ENST00000418882 CT45A9P0DMV2 189 aa3.24□□□□□ -1.89
HMGB1P49-201ENST00000418882 UROSP10746 265 aa3.24□□□□□ -1.89
HMGB1P49-201ENST00000418882 SNU13P55769 128 aaKnown RBP3.24□□□□□ -1.89
HMGB1P49-201ENST00000418882 EMC2Q15006 297 aa3.24□□□□□ -1.89
HMGB1P49-201ENST00000418882 ANKRD55Q3KP44 614 aa3.24□□□□□ -1.89
HMGB1P49-201ENST00000418882 C14orf28Q4W4Y0 310 aa3.24□□□□□ -1.89
HMGB1P49-201ENST00000418882 CT45A2Q5DJT8 189 aa3.24□□□□□ -1.89
HMGB1P49-201ENST00000418882 FAM219BQ5XKK7 198 aa3.24□□□□□ -1.89
HMGB1P49-201ENST00000418882 GOLGA5Q8TBA6 731 aa3.24□□□□□ -1.89
HMGB1P49-201ENST00000418882 C16orf58Q96GQ5 468 aa3.24□□□□□ -1.89
HMGB1P49-201ENST00000418882 CAPNS2Q96L46 248 aa3.24□□□□□ -1.89
HMGB1P49-201ENST00000418882 FUT8Q9BYC5 575 aa3.24□□□□□ -1.89
HMGB1P49-201ENST00000418882 OSBPL8Q9BZF1 889 aa3.24□□□□□ -1.89
HMGB1P49-201ENST00000418882 DPEP3Q9H4B8 488 aa3.24□□□□□ -1.89
HMGB1P49-201ENST00000418882 ADGRL4Q9HBW9 690 aa3.24□□□□□ -1.89
HMGB1P49-201ENST00000418882 KCNK6Q9Y257 313 aa3.24□□□□□ -1.89
HMGB1P49-201ENST00000418882 FGD5Q6ZNL6 1462 aa3.23□□□□□ -1.89
HMGB1P49-201ENST00000418882 RNF212BA8MTL3 300 aa3.23□□□□□ -1.89
HMGB1P49-201ENST00000418882 RHBDL1O75783 438 aa3.23□□□□□ -1.89
HMGB1P49-201ENST00000418882 GSTA2P09210 222 aa3.23□□□□□ -1.89
HMGB1P49-201ENST00000418882 CPA3P15088 417 aa3.23□□□□□ -1.89
HMGB1P49-201ENST00000418882 MUTP22033 750 aa3.23□□□□□ -1.89
HMGB1P49-201ENST00000418882 ATRXP46100 2492 aa3.23□□□□□ -1.89
HMGB1P49-201ENST00000418882 SMSP52788 366 aa3.23□□□□□ -1.89
HMGB1P49-201ENST00000418882 C17orf67Q0P5P2 114 aa3.23□□□□□ -1.89
HMGB1P49-201ENST00000418882 HSPA14Q0VDF9 509 aa3.23□□□□□ -1.89
HMGB1P49-201ENST00000418882 RPS6KA1Q15418 735 aa3.23□□□□□ -1.89
HMGB1P49-201ENST00000418882 STXBP2Q15833 593 aa3.23□□□□□ -1.89
HMGB1P49-201ENST00000418882 STX1AQ16623 288 aa3.23□□□□□ -1.89
HMGB1P49-201ENST00000418882 LIPJQ5W064 366 aa3.23□□□□□ -1.89
HMGB1P49-201ENST00000418882 STHQ8IWL8 128 aa3.23□□□□□ -1.89
HMGB1P49-201ENST00000418882 BCL2L2Q92843 193 aaPredicted RBP3.23□□□□□ -1.89
HMGB1P49-201ENST00000418882 GLYATL1Q969I3 302 aa3.23□□□□□ -1.89
HMGB1P49-201ENST00000418882 ZNF414Q96IQ9 312 aa3.23□□□□□ -1.89
HMGB1P49-201ENST00000418882 CNOT6LQ96LI5 555 aaKnown RBP3.23□□□□□ -1.89
HMGB1P49-201ENST00000418882 Q9HAA7 133 aa3.23□□□□□ -1.89
HMGB1P49-201ENST00000418882 MAGEF1Q9HAY2 307 aa3.23□□□□□ -1.89
HMGB1P49-201ENST00000418882 DDX28Q9NUL7 540 aaKnown RBP3.23□□□□□ -1.89
HMGB1P49-201ENST00000418882 SPG21Q9NZD8 308 aa3.23□□□□□ -1.89
HMGB1P49-201ENST00000418882 EIF3KQ9UBQ5 218 aaKnown RBP3.23□□□□□ -1.89
HMGB1P49-201ENST00000418882 RSPH14Q9UHP6 348 aa3.23□□□□□ -1.89
HMGB1P49-201ENST00000418882 MRTO4Q9UKD2 239 aaKnown RBP3.23□□□□□ -1.89
HMGB1P49-201ENST00000418882 DIMT1Q9UNQ2 313 aaKnown RBP3.23□□□□□ -1.89
HMGB1P49-201ENST00000418882 ITM2BQ9Y287 266 aa3.23□□□□□ -1.89
HMGB1P49-201ENST00000418882 TDRD6O60522 2096 aaKnown RBP3.23□□□□□ -1.89
HMGB1P49-201ENST00000418882 CFAP65Q6ZU64 1925 aaKnown RBP3.23□□□□□ -1.89
HMGB1P49-201ENST00000418882 OAS1P00973 400 aaKnown RBP3.22□□□□□ -1.89
HMGB1P49-201ENST00000418882 ZNF19P17023 458 aa3.22□□□□□ -1.89
HMGB1P49-201ENST00000418882 CYP3A5P20815 502 aa3.22□□□□□ -1.89
HMGB1P49-201ENST00000418882 TNFRSF4P43489 277 aa3.22□□□□□ -1.89
HMGB1P49-201ENST00000418882 BRCC3P46736 316 aa3.22□□□□□ -1.89
HMGB1P49-201ENST00000418882 NME5P56597 212 aa3.22□□□□□ -1.89
HMGB1P49-201ENST00000418882 KCNK10P57789 538 aa3.22□□□□□ -1.89
HMGB1P49-201ENST00000418882 RCN2Q14257 317 aa3.22□□□□□ -1.89
HMGB1P49-201ENST00000418882 SLC39A12Q504Y0 691 aa3.22□□□□□ -1.89
HMGB1P49-201ENST00000418882 GLRA4Q5JXX5 417 aa3.22□□□□□ -1.89
HMGB1P49-201ENST00000418882 SLC10A5Q5PT55 438 aa3.22□□□□□ -1.89
HMGB1P49-201ENST00000418882 TMEM270Q6UE05 265 aa3.22□□□□□ -1.89
HMGB1P49-201ENST00000418882 PRSS48Q7RTY5 328 aa3.22□□□□□ -1.89
HMGB1P49-201ENST00000418882 PRSS42Q7Z5A4 293 aa3.22□□□□□ -1.89
HMGB1P49-201ENST00000418882 FBXW8Q8N3Y1 598 aa3.22□□□□□ -1.89
HMGB1P49-201ENST00000418882 NAT8LQ8N9F0 302 aa3.22□□□□□ -1.89
HMGB1P49-201ENST00000418882 ICA1LQ8NDH6 482 aa3.22□□□□□ -1.89
HMGB1P49-201ENST00000418882 PPP1R16AQ96I34 528 aa3.22□□□□□ -1.89
HMGB1P49-201ENST00000418882 COG3Q96JB2 828 aa3.22□□□□□ -1.89
HMGB1P49-201ENST00000418882 SERAC1Q96JX3 654 aa3.22□□□□□ -1.89
HMGB1P49-201ENST00000418882 KRTAP4-4Q9BYR3 166 aa3.22□□□□□ -1.89
HMGB1P49-201ENST00000418882 PNNQ9H307 717 aaKnown RBP3.22□□□□□ -1.89
HMGB1P49-201ENST00000418882 MMADHCQ9H3L0 296 aaPredicted RBP3.22□□□□□ -1.89
HMGB1P49-201ENST00000418882 AMBNQ9NP70 447 aa3.22□□□□□ -1.89
HMGB1P49-201ENST00000418882 KIF7Q2M1P5 1343 aa3.21□□□□□ -1.89
HMGB1P49-201ENST00000418882 CCT8L1PA6NM43 557 aa3.21□□□□□ -1.9
HMGB1P49-201ENST00000418882 MEI4A8MW99 385 aa3.21□□□□□ -1.9
HMGB1P49-201ENST00000418882 AKAP3O75969 853 aa3.21□□□□□ -1.9
HMGB1P49-201ENST00000418882 PDGFBP01127 241 aaPredicted RBP3.21□□□□□ -1.9
HMGB1P49-201ENST00000418882 PPIAP62937 165 aaKnown RBP3.21□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms