RNA–Protein interactions for RNA: ENST00000418660.1

LINC00404-201, long intergenic non-protein coding RNA 404, humanhuman

TSL 2 BASIC

Gene LINC00404, Length 428 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00404-201ENST00000418660 METTL6Q8TCB7 284 aa15.24■□□□□ 0.03
LINC00404-201ENST00000418660 SLC22A8Q8TCC7 542 aa15.24■□□□□ 0.03
LINC00404-201ENST00000418660 DOK4Q8TEW6 326 aa15.24■□□□□ 0.03
LINC00404-201ENST00000418660 CCDC120Q96HB5 630 aa15.24■□□□□ 0.03
LINC00404-201ENST00000418660 CXorf21Q9HAI6 301 aa15.24■□□□□ 0.03
LINC00404-201ENST00000418660 DEPPQ9NTK1 212 aa15.24■□□□□ 0.03
LINC00404-201ENST00000418660 VPS29Q9UBQ0 182 aa15.24■□□□□ 0.03
LINC00404-201ENST00000418660 SH3BGRL2Q9UJC5 107 aa15.24■□□□□ 0.03
LINC00404-201ENST00000418660 EMCNQ9ULC0 261 aa15.24■□□□□ 0.03
LINC00404-201ENST00000418660 PCDHA9Q9Y5H5 950 aa15.24■□□□□ 0.03
LINC00404-201ENST00000418660 SPTBN1Q01082 2364 aaKnown RBP15.24■□□□□ 0.03
LINC00404-201ENST00000418660 C1orf226A1L170 272 aa15.23■□□□□ 0.03
LINC00404-201ENST00000418660 FOXO6A8MYZ6 492 aa15.23■□□□□ 0.03
LINC00404-201ENST00000418660 HS6ST1O60243 411 aa15.23■□□□□ 0.03
LINC00404-201ENST00000418660 ULK1O75385 1050 aa15.23■□□□□ 0.03
LINC00404-201ENST00000418660 ABOP16442 354 aa15.23■□□□□ 0.03
LINC00404-201ENST00000418660 KRT15P19012 456 aa15.23■□□□□ 0.03
LINC00404-201ENST00000418660 CNR1P21554 472 aa15.23■□□□□ 0.03
LINC00404-201ENST00000418660 HMOX2P30519 316 aa15.23■□□□□ 0.03
LINC00404-201ENST00000418660 CCT5P48643 541 aa15.23■□□□□ 0.03
LINC00404-201ENST00000418660 XKP51811 444 aa15.23■□□□□ 0.03
LINC00404-201ENST00000418660 SLC37A1P57057 533 aa15.23■□□□□ 0.03
LINC00404-201ENST00000418660 HSF1Q00613 529 aa15.23■□□□□ 0.03
LINC00404-201ENST00000418660 CSTF3Q12996 717 aaKnown RBP15.23■□□□□ 0.03
LINC00404-201ENST00000418660 LCP2Q13094 533 aa15.23■□□□□ 0.03
LINC00404-201ENST00000418660 TCHHL1Q5QJ38 904 aaPredicted RBP15.23■□□□□ 0.03
LINC00404-201ENST00000418660 ZYG11AQ6WRX3 759 aa15.23■□□□□ 0.03
LINC00404-201ENST00000418660 C1orf52Q8N6N3 182 aaKnown RBP15.23■□□□□ 0.03
LINC00404-201ENST00000418660 OR2M7Q8NG81 312 aa15.23■□□□□ 0.03
LINC00404-201ENST00000418660 CHTF18Q8WVB6 975 aa15.23■□□□□ 0.03
LINC00404-201ENST00000418660 TM4SF18Q96CE8 201 aa15.23■□□□□ 0.03
LINC00404-201ENST00000418660 HBEGFQ99075 208 aa15.23■□□□□ 0.03
LINC00404-201ENST00000418660 SACM1LQ9NTJ5 587 aa15.23■□□□□ 0.03
LINC00404-201ENST00000418660 TINAGQ9UJW2 476 aa15.23■□□□□ 0.03
LINC00404-201ENST00000418660 CES1P1Q9UKY3 287 aa15.23■□□□□ 0.03
LINC00404-201ENST00000418660 CROCCQ5TZA2 2017 aa15.22■□□□□ 0.03
LINC00404-201ENST00000418660 A0A1W2PS29 197 aa15.22■□□□□ 0.03
LINC00404-201ENST00000418660 PINLYPA6NC86 204 aa15.22■□□□□ 0.03
LINC00404-201ENST00000418660 G3V2L1 256 aa15.22■□□□□ 0.03
LINC00404-201ENST00000418660 NADKO95544 446 aaPredicted RBP15.22■□□□□ 0.03
LINC00404-201ENST00000418660 ESRRBO95718 433 aa15.22■□□□□ 0.03
LINC00404-201ENST00000418660 PROCP04070 461 aa15.22■□□□□ 0.03
LINC00404-201ENST00000418660 CLPSP04118 112 aa15.22■□□□□ 0.03
LINC00404-201ENST00000418660 ENO1P06733 434 aaKnown RBP15.22■□□□□ 0.03
LINC00404-201ENST00000418660 MYL2P10916 166 aa15.22■□□□□ 0.03
LINC00404-201ENST00000418660 ESRRAP11474 423 aaPredicted RBP15.22■□□□□ 0.03
LINC00404-201ENST00000418660 CPMP14384 443 aa15.22■□□□□ 0.03
LINC00404-201ENST00000418660 PTGER1P34995 402 aa15.22■□□□□ 0.03
LINC00404-201ENST00000418660 CRHR1P34998 444 aa15.22■□□□□ 0.03
LINC00404-201ENST00000418660 TRA2BP62995 288 aaKnown RBP15.22■□□□□ 0.03
LINC00404-201ENST00000418660 EBPQ15125 230 aaKnown RBP15.22■□□□□ 0.03
LINC00404-201ENST00000418660 ZNF791Q3KP31 576 aaPredicted RBP15.22■□□□□ 0.03
LINC00404-201ENST00000418660 CCDC153Q494R4 210 aa15.22■□□□□ 0.03
LINC00404-201ENST00000418660 CMPK2Q5EBM0 449 aa15.22■□□□□ 0.03
LINC00404-201ENST00000418660 FAM219BQ5XKK7 198 aa15.22■□□□□ 0.03
LINC00404-201ENST00000418660 SLC48A1Q6P1K1 146 aa15.22■□□□□ 0.03
LINC00404-201ENST00000418660 RPTNQ6XPR3 784 aa15.22■□□□□ 0.03
LINC00404-201ENST00000418660 RGS9BPQ6ZS82 235 aa15.22■□□□□ 0.03
LINC00404-201ENST00000418660 GK5Q6ZS86 529 aa15.22■□□□□ 0.03
LINC00404-201ENST00000418660 FGD2Q7Z6J4 655 aa15.22■□□□□ 0.03
LINC00404-201ENST00000418660 GALNT12Q8IXK2 581 aa15.22■□□□□ 0.03
LINC00404-201ENST00000418660 DND1Q8IYX4 353 aaKnown RBP15.22■□□□□ 0.03
LINC00404-201ENST00000418660 GBP7Q8N8V2 638 aaPredicted RBP15.22■□□□□ 0.03
LINC00404-201ENST00000418660 ITLN2Q8WWU7 325 aaPredicted RBP15.22■□□□□ 0.03
LINC00404-201ENST00000418660 FAM173AQ9BQD7 235 aa15.22■□□□□ 0.03
LINC00404-201ENST00000418660 WWTR1Q9GZV5 400 aa15.22■□□□□ 0.03
LINC00404-201ENST00000418660 GSTO2Q9H4Y5 243 aa15.22■□□□□ 0.03
LINC00404-201ENST00000418660 ANKZF1Q9H8Y5 726 aa15.22■□□□□ 0.03
LINC00404-201ENST00000418660 GRID1Q9ULK0 1009 aa15.22■□□□□ 0.03
LINC00404-201ENST00000418660 CCDC151A5D8V7 595 aa15.21■□□□□ 0.03
LINC00404-201ENST00000418660 GOLGA6L10A6NI86 522 aa15.21■□□□□ 0.03
LINC00404-201ENST00000418660 SMIM23A6NLE4 172 aa15.21■□□□□ 0.03
LINC00404-201ENST00000418660 PRRG2O14669 202 aa15.21■□□□□ 0.03
LINC00404-201ENST00000418660 ZNHIT1O43257 154 aa15.21■□□□□ 0.03
LINC00404-201ENST00000418660 CDH16O75309 829 aa15.21■□□□□ 0.03
LINC00404-201ENST00000418660 P04436 131 aa15.21■□□□□ 0.03
LINC00404-201ENST00000418660 CHN1P15882 459 aa15.21■□□□□ 0.03
LINC00404-201ENST00000418660 PORP16435 677 aaPredicted RBP15.21■□□□□ 0.03
LINC00404-201ENST00000418660 SSTR4P31391 388 aa15.21■□□□□ 0.03
LINC00404-201ENST00000418660 DEKP35659 375 aaKnown RBP15.21■□□□□ 0.03
LINC00404-201ENST00000418660 DCTP40126 519 aa15.21■□□□□ 0.03
LINC00404-201ENST00000418660 NAA20P61599 178 aa15.21■□□□□ 0.03
LINC00404-201ENST00000418660 PPIAP62937 165 aaKnown RBP15.21■□□□□ 0.03
LINC00404-201ENST00000418660 PLGLB1Q02325 96 aa15.21■□□□□ 0.03
LINC00404-201ENST00000418660 FUT7Q11130 342 aa15.21■□□□□ 0.03
LINC00404-201ENST00000418660 LYPD8Q6UX82 237 aa15.21■□□□□ 0.03
LINC00404-201ENST00000418660 MRGPRGQ86SM5 289 aa15.21■□□□□ 0.03
LINC00404-201ENST00000418660 ZNF808Q8N4W9 903 aaPredicted RBP15.21■□□□□ 0.03
LINC00404-201ENST00000418660 CCNYL1Q8N7R7 359 aa15.21■□□□□ 0.03
LINC00404-201ENST00000418660 OR52N2Q8NGI0 321 aa15.21■□□□□ 0.03
LINC00404-201ENST00000418660 RDH11Q8TC12 318 aa15.21■□□□□ 0.03
LINC00404-201ENST00000418660 EPS8L3Q8TE67 593 aaKnown RBP15.21■□□□□ 0.03
LINC00404-201ENST00000418660 AGAP11Q8TF27 550 aa15.21■□□□□ 0.03
LINC00404-201ENST00000418660 GAL3ST4Q96RP7 486 aa15.21■□□□□ 0.03
LINC00404-201ENST00000418660 FAIM2Q9BWQ8 316 aa15.21■□□□□ 0.03
LINC00404-201ENST00000418660 PLSCR2Q9NRY7 297 aa15.21■□□□□ 0.03
LINC00404-201ENST00000418660 PSME2Q9UL46 239 aa15.21■□□□□ 0.03
LINC00404-201ENST00000418660 A0A0G2JMM0 328 aa15.2■□□□□ 0.02
LINC00404-201ENST00000418660 A0A1B0GTH9 108 aa15.2■□□□□ 0.02
LINC00404-201ENST00000418660 C2orf92A0A1B0GVN3 265 aa15.2■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms