RNA–Protein interactions for RNA: ENST00000418310.5

LIMK1-202, Transcript of LIM domain kinase 1, humanhuman

TSL 5 BASIC

Gene LIMK1, Length 3,360 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-202ENST00000418310 FKBP14Q9NWM8 211 aa11.28□□□□□ -0.6
LIMK1-202ENST00000418310 ZNF232Q9UNY5 417 aa11.28□□□□□ -0.6
LIMK1-202ENST00000418310 CFL2Q9Y281 166 aa11.28□□□□□ -0.6
LIMK1-202ENST00000418310 OTOL1A6NHN0 477 aaPredicted RBP11.28□□□□□ -0.6
LIMK1-202ENST00000418310 TAF4O00268 1085 aa11.28□□□□□ -0.6
LIMK1-202ENST00000418310 PTX3P26022 381 aaPredicted RBP11.28□□□□□ -0.6
LIMK1-202ENST00000418310 SSR2P43308 183 aa11.28□□□□□ -0.6
LIMK1-202ENST00000418310 HNRNPA0Q13151 305 aaKnown RBP11.28□□□□□ -0.6
LIMK1-202ENST00000418310 FBXO43Q4G163 708 aa11.28□□□□□ -0.6
LIMK1-202ENST00000418310 DGLUCYQ7Z3D6 616 aa11.28□□□□□ -0.6
LIMK1-202ENST00000418310 LAS2Q8IYD9 372 aa11.28□□□□□ -0.6
LIMK1-202ENST00000418310 KRT78Q8N1N4 520 aa11.28□□□□□ -0.6
LIMK1-202ENST00000418310 KLHL6Q8WZ60 621 aa11.28□□□□□ -0.6
LIMK1-202ENST00000418310 SLC35B4Q969S0 331 aa11.28□□□□□ -0.6
LIMK1-202ENST00000418310 TM4SF18Q96CE8 201 aa11.28□□□□□ -0.6
LIMK1-202ENST00000418310 C1GALT1C1Q96EU7 318 aa11.28□□□□□ -0.6
LIMK1-202ENST00000418310 LRR1Q96L50 414 aa11.28□□□□□ -0.6
LIMK1-202ENST00000418310 SLC6A18Q96N87 628 aa11.28□□□□□ -0.6
LIMK1-202ENST00000418310 SDHCQ99643 169 aaPredicted RBP11.28□□□□□ -0.6
LIMK1-202ENST00000418310 TM9SF2Q99805 663 aa11.28□□□□□ -0.6
LIMK1-202ENST00000418310 SGPP1Q9BX95 441 aa11.28□□□□□ -0.6
LIMK1-202ENST00000418310 NEK6Q9HC98 313 aa11.28□□□□□ -0.6
LIMK1-202ENST00000418310 DYRK4Q9NR20 520 aa11.28□□□□□ -0.6
LIMK1-202ENST00000418310 FBXW2Q9UKT8 454 aa11.28□□□□□ -0.6
LIMK1-202ENST00000418310 SCN2AQ99250 2005 aa11.27□□□□□ -0.6
LIMK1-202ENST00000418310 F5P12259 2224 aa11.27□□□□□ -0.6
LIMK1-202ENST00000418310 HMGN4O00479 90 aa11.27□□□□□ -0.6
LIMK1-202ENST00000418310 PI15O43692 258 aa11.27□□□□□ -0.6
LIMK1-202ENST00000418310 LCMT2O60294 686 aaKnown RBP11.27□□□□□ -0.6
LIMK1-202ENST00000418310 PCDH8O95206 1070 aa11.27□□□□□ -0.6
LIMK1-202ENST00000418310 TBX6O95947 436 aaPredicted RBP11.27□□□□□ -0.6
LIMK1-202ENST00000418310 CCL5P13501 91 aa11.27□□□□□ -0.6
LIMK1-202ENST00000418310 OSMP13725 252 aa11.27□□□□□ -0.6
LIMK1-202ENST00000418310 PSMA1P25786 263 aaKnown RBP11.27□□□□□ -0.6
LIMK1-202ENST00000418310 ZNF45Q02386 682 aa11.27□□□□□ -0.6
LIMK1-202ENST00000418310 RUNX1T1Q06455 604 aa11.27□□□□□ -0.6
LIMK1-202ENST00000418310 PDE7AQ13946 482 aa11.27□□□□□ -0.6
LIMK1-202ENST00000418310 SNAPC1Q16533 368 aa11.27□□□□□ -0.6
LIMK1-202ENST00000418310 GPAT3Q53EU6 434 aa11.27□□□□□ -0.6
LIMK1-202ENST00000418310 FAM131AQ6UXB0 335 aa11.27□□□□□ -0.6
LIMK1-202ENST00000418310 TMPRSS11AQ6ZMR5 421 aa11.27□□□□□ -0.6
LIMK1-202ENST00000418310 ABI3BPQ7Z7G0 1075 aa11.27□□□□□ -0.6
LIMK1-202ENST00000418310 GATAD2BQ8WXI9 593 aa11.27□□□□□ -0.6
LIMK1-202ENST00000418310 SLC9A6Q92581 669 aa11.27□□□□□ -0.6
LIMK1-202ENST00000418310 GPA33Q99795 319 aa11.27□□□□□ -0.6
LIMK1-202ENST00000418310 TREX2Q9BQ50 279 aaPredicted RBP11.27□□□□□ -0.6
LIMK1-202ENST00000418310 C19orf43Q9BQ61 176 aa11.27□□□□□ -0.6
LIMK1-202ENST00000418310 YIPF2Q9BWQ6 316 aa11.27□□□□□ -0.6
LIMK1-202ENST00000418310 SERHL2Q9H4I8 314 aa11.27□□□□□ -0.6
LIMK1-202ENST00000418310 SP140LQ9H930 580 aa11.27□□□□□ -0.6
LIMK1-202ENST00000418310 CNIH4Q9P003 139 aa11.27□□□□□ -0.6
LIMK1-202ENST00000418310 OBSL1O75147 1896 aa11.27□□□□□ -0.61
LIMK1-202ENST00000418310 ZNF106Q9H2Y7 1883 aaKnown RBP11.27□□□□□ -0.61
LIMK1-202ENST00000418310 PRAMEF27A3QJZ7 478 aa11.27□□□□□ -0.61
LIMK1-202ENST00000418310 GSTM5P46439 218 aa11.27□□□□□ -0.61
LIMK1-202ENST00000418310 GINS1Q14691 196 aa11.27□□□□□ -0.61
LIMK1-202ENST00000418310 CCDC85BQ15834 202 aaPredicted RBP11.27□□□□□ -0.61
LIMK1-202ENST00000418310 KHDRBS2Q5VWX1 349 aaKnown RBP11.27□□□□□ -0.61
LIMK1-202ENST00000418310 ACSM5Q6NUN0 579 aa11.27□□□□□ -0.61
LIMK1-202ENST00000418310 PODNL1Q6PEZ8 512 aa11.27□□□□□ -0.61
LIMK1-202ENST00000418310 RASGRP3Q8IV61 690 aa11.27□□□□□ -0.61
LIMK1-202ENST00000418310 TRIM48Q8IWZ4 208 aa11.27□□□□□ -0.61
LIMK1-202ENST00000418310 SCAIQ8N9R8 606 aa11.27□□□□□ -0.61
LIMK1-202ENST00000418310 GOT1L1Q8NHS2 421 aaPredicted RBP11.27□□□□□ -0.61
LIMK1-202ENST00000418310 SMPDL3AQ92484 453 aa11.27□□□□□ -0.61
LIMK1-202ENST00000418310 RAD51AP1Q96B01 352 aa11.27□□□□□ -0.61
LIMK1-202ENST00000418310 CRELD1Q96HD1 420 aa11.27□□□□□ -0.61
LIMK1-202ENST00000418310 ART5Q96L15 291 aa11.27□□□□□ -0.61
LIMK1-202ENST00000418310 FNDC11Q9BVV2 318 aa11.27□□□□□ -0.61
LIMK1-202ENST00000418310 ZCCHC2Q9C0B9 1178 aaKnown RBP11.27□□□□□ -0.61
LIMK1-202ENST00000418310 RACGAP1Q9H0H5 632 aa11.27□□□□□ -0.61
LIMK1-202ENST00000418310 KLHL3Q9UH77 587 aa11.27□□□□□ -0.61
LIMK1-202ENST00000418310 KCNK6Q9Y257 313 aa11.27□□□□□ -0.61
LIMK1-202ENST00000418310 REV3LO60673 3130 aa11.27□□□□□ -0.61
LIMK1-202ENST00000418310 CHD9Q3L8U1 2897 aa11.27□□□□□ -0.61
LIMK1-202ENST00000418310 HEPACAM2A8MVW5 462 aa11.27□□□□□ -0.61
LIMK1-202ENST00000418310 FOXE1O00358 373 aaPredicted RBP11.27□□□□□ -0.61
LIMK1-202ENST00000418310 LILRB5O75023 590 aa11.27□□□□□ -0.61
LIMK1-202ENST00000418310 EPHX1P07099 455 aa11.27□□□□□ -0.61
LIMK1-202ENST00000418310 ADH5P11766 374 aa11.27□□□□□ -0.61
LIMK1-202ENST00000418310 ACP5P13686 325 aa11.27□□□□□ -0.61
LIMK1-202ENST00000418310 PTPN2P17706 415 aa11.27□□□□□ -0.61
LIMK1-202ENST00000418310 CD79BP40259 229 aa11.27□□□□□ -0.61
LIMK1-202ENST00000418310 C21orf58P58505 322 aa11.27□□□□□ -0.61
LIMK1-202ENST00000418310 INSL4Q14641 139 aa11.27□□□□□ -0.61
LIMK1-202ENST00000418310 HEPACAMQ14CZ8 416 aa11.27□□□□□ -0.61
LIMK1-202ENST00000418310 PGBD2Q6P3X8 592 aa11.27□□□□□ -0.61
LIMK1-202ENST00000418310 CCDC116Q8IYX3 515 aa11.27□□□□□ -0.61
LIMK1-202ENST00000418310 UBASH3BQ8TF42 649 aa11.27□□□□□ -0.61
LIMK1-202ENST00000418310 TTYH2Q9BSA4 534 aa11.27□□□□□ -0.61
LIMK1-202ENST00000418310 NTNG1Q9Y2I2 539 aa11.27□□□□□ -0.61
LIMK1-202ENST00000418310 WBP11Q9Y2W2 641 aaKnown RBP11.27□□□□□ -0.61
LIMK1-202ENST00000418310 MRPS23Q9Y3D9 190 aaKnown RBP11.27□□□□□ -0.61
LIMK1-202ENST00000418310 ISPDA4D126 451 aa11.26□□□□□ -0.61
LIMK1-202ENST00000418310 H3BQ06 376 aaPredicted RBP11.26□□□□□ -0.61
LIMK1-202ENST00000418310 MRPS14O60783 128 aaKnown RBP11.26□□□□□ -0.61
LIMK1-202ENST00000418310 DDCP20711 480 aa11.26□□□□□ -0.61
LIMK1-202ENST00000418310 CTNNB1P35222 781 aa11.26□□□□□ -0.61
LIMK1-202ENST00000418310 PPM1AP35813 382 aa11.26□□□□□ -0.61
LIMK1-202ENST00000418310 NCBP2P52298 156 aaKnown RBP eCLIP11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms