RNA–Protein interactions for RNA: ENST00000417656.6

SKA1-203, Transcript of spindle and kinetochore associated complex subunit 1, humanhuman

TSL 2 BASIC

Gene SKA1, Length 1,095 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA1-203ENST00000417656 DPM1O60762 260 aa11.62□□□□□ -0.55
SKA1-203ENST00000417656 F10P00742 488 aa11.62□□□□□ -0.55
SKA1-203ENST00000417656 NUDT7P0C024 238 aa11.62□□□□□ -0.55
SKA1-203ENST00000417656 SLC35E2P0CK97 266 aa11.62□□□□□ -0.55
SKA1-203ENST00000417656 CPMP14384 443 aa11.62□□□□□ -0.55
SKA1-203ENST00000417656 DRD2P14416 443 aa11.62□□□□□ -0.55
SKA1-203ENST00000417656 NT5EP21589 574 aa11.62□□□□□ -0.55
SKA1-203ENST00000417656 FEN1P39748 380 aaKnown RBP11.62□□□□□ -0.55
SKA1-203ENST00000417656 ST13P50502 369 aaKnown RBP11.62□□□□□ -0.55
SKA1-203ENST00000417656 CLCN2P51788 898 aa11.62□□□□□ -0.55
SKA1-203ENST00000417656 XKP51811 444 aa11.62□□□□□ -0.55
SKA1-203ENST00000417656 ERVK-8P63133 956 aa11.62□□□□□ -0.55
SKA1-203ENST00000417656 C2orf80Q0P641 193 aa11.62□□□□□ -0.55
SKA1-203ENST00000417656 KLRB1Q12918 225 aa11.62□□□□□ -0.55
SKA1-203ENST00000417656 HEPACAMQ14CZ8 416 aa11.62□□□□□ -0.55
SKA1-203ENST00000417656 SPRED3Q2MJR0 410 aa11.62□□□□□ -0.55
SKA1-203ENST00000417656 ACER2Q5QJU3 275 aa11.62□□□□□ -0.55
SKA1-203ENST00000417656 ABHD17BQ5VST6 288 aa11.62□□□□□ -0.55
SKA1-203ENST00000417656 H3F3CQ6NXT2 135 aa11.62□□□□□ -0.55
SKA1-203ENST00000417656 IGFL2Q6UWQ7 119 aa11.62□□□□□ -0.55
SKA1-203ENST00000417656 IKBIPQ70UQ0 350 aa11.62□□□□□ -0.55
SKA1-203ENST00000417656 GALNT12Q8IXK2 581 aa11.62□□□□□ -0.55
SKA1-203ENST00000417656 KIRREL3Q8IZU9 778 aa11.62□□□□□ -0.55
SKA1-203ENST00000417656 BEST3Q8N1M1 668 aa11.62□□□□□ -0.55
SKA1-203ENST00000417656 SLC5A8Q8N695 610 aa11.62□□□□□ -0.55
SKA1-203ENST00000417656 RBMXL3Q8N7X1 1067 aaKnown RBP11.62□□□□□ -0.55
SKA1-203ENST00000417656 MORN4Q8NDC4 146 aa11.62□□□□□ -0.55
SKA1-203ENST00000417656 C7orf57Q8NEG2 295 aa11.62□□□□□ -0.55
SKA1-203ENST00000417656 PUM2Q8TB72 1066 aaKnown RBP eCLIP11.62□□□□□ -0.55
SKA1-203ENST00000417656 ZNF721Q8TF20 911 aa11.62□□□□□ -0.55
SKA1-203ENST00000417656 THAP3Q8WTV1 239 aaPredicted RBP11.62□□□□□ -0.55
SKA1-203ENST00000417656 DYDC1Q8WWB3 177 aa11.62□□□□□ -0.55
SKA1-203ENST00000417656 TM9SF4Q92544 642 aa11.62□□□□□ -0.55
SKA1-203ENST00000417656 ZNF75CPQ92670 426 aaPredicted RBP11.62□□□□□ -0.55
SKA1-203ENST00000417656 GFM2Q969S9 779 aaKnown RBP11.62□□□□□ -0.55
SKA1-203ENST00000417656 CNRIP1Q96F85 164 aaPredicted RBP11.62□□□□□ -0.55
SKA1-203ENST00000417656 RBM18Q96H35 190 aaKnown RBP11.62□□□□□ -0.55
SKA1-203ENST00000417656 FBXL20Q96IG2 436 aa11.62□□□□□ -0.55
SKA1-203ENST00000417656 EGLN2Q96KS0 407 aa11.62□□□□□ -0.55
SKA1-203ENST00000417656 NUF2Q9BZD4 464 aa11.62□□□□□ -0.55
SKA1-203ENST00000417656 MIEF1Q9NQG6 463 aa11.62□□□□□ -0.55
SKA1-203ENST00000417656 PLA2G3Q9NZ20 509 aa11.62□□□□□ -0.55
SKA1-203ENST00000417656 COPS7AQ9UBW8 275 aa11.62□□□□□ -0.55
SKA1-203ENST00000417656 EXO1Q9UQ84 846 aaKnown RBP11.62□□□□□ -0.55
SKA1-203ENST00000417656 ERVK-19Q9WJR5 959 aa11.62□□□□□ -0.55
SKA1-203ENST00000417656 TMED5Q9Y3A6 229 aa11.62□□□□□ -0.55
SKA1-203ENST00000417656 AKAP10O43572 662 aa11.61□□□□□ -0.55
SKA1-203ENST00000417656 DYRK3O43781 588 aa11.61□□□□□ -0.55
SKA1-203ENST00000417656 LRATO95237 230 aa11.61□□□□□ -0.55
SKA1-203ENST00000417656 CT62P0C5K7 136 aa11.61□□□□□ -0.55
SKA1-203ENST00000417656 KITP10721 976 aa11.61□□□□□ -0.55
SKA1-203ENST00000417656 BCKDHAP12694 445 aa11.61□□□□□ -0.55
SKA1-203ENST00000417656 PORP16435 677 aaPredicted RBP11.61□□□□□ -0.55
SKA1-203ENST00000417656 CSNK2A2P19784 350 aaPredicted RBP11.61□□□□□ -0.55
SKA1-203ENST00000417656 DDCP20711 480 aa11.61□□□□□ -0.55
SKA1-203ENST00000417656 MAPK1P28482 360 aa11.61□□□□□ -0.55
SKA1-203ENST00000417656 ARG2P78540 354 aa11.61□□□□□ -0.55
SKA1-203ENST00000417656 BIKQ13323 160 aa11.61□□□□□ -0.55
SKA1-203ENST00000417656 ZNF267Q14586 743 aaPredicted RBP11.61□□□□□ -0.55
SKA1-203ENST00000417656 LTB4RQ15722 352 aa11.61□□□□□ -0.55
SKA1-203ENST00000417656 PRSS53Q2L4Q9 553 aa11.61□□□□□ -0.55
SKA1-203ENST00000417656 C6orf136Q5SQH8 315 aa11.61□□□□□ -0.55
SKA1-203ENST00000417656 C6orf163Q5TEZ5 329 aa11.61□□□□□ -0.55
SKA1-203ENST00000417656 SLC6A19Q695T7 634 aa11.61□□□□□ -0.55
SKA1-203ENST00000417656 IGFL3Q6UXB1 125 aa11.61□□□□□ -0.55
SKA1-203ENST00000417656 HPS6Q86YV9 775 aa11.61□□□□□ -0.55
SKA1-203ENST00000417656 TICAM1Q8IUC6 712 aa11.61□□□□□ -0.55
SKA1-203ENST00000417656 LRRC25Q8N386 305 aaPredicted RBP11.61□□□□□ -0.55
SKA1-203ENST00000417656 LIX1Q8N485 282 aa11.61□□□□□ -0.55
SKA1-203ENST00000417656 ZADH2Q8N4Q0 377 aa11.61□□□□□ -0.55
SKA1-203ENST00000417656 TEX19Q8NA77 164 aa11.61□□□□□ -0.55
SKA1-203ENST00000417656 FNDC5Q8NAU1 212 aa11.61□□□□□ -0.55
SKA1-203ENST00000417656 OR1N1Q8NGS0 311 aa11.61□□□□□ -0.55
SKA1-203ENST00000417656 LRRC8CQ8TDW0 803 aa11.61□□□□□ -0.55
SKA1-203ENST00000417656 RIT1Q92963 219 aa11.61□□□□□ -0.55
SKA1-203ENST00000417656 ART5Q96L15 291 aa11.61□□□□□ -0.55
SKA1-203ENST00000417656 ZNF354BQ96LW1 612 aa11.61□□□□□ -0.55
SKA1-203ENST00000417656 ZNF681Q96N22 645 aa11.61□□□□□ -0.55
SKA1-203ENST00000417656 DEFB126Q9BYW3 111 aa11.61□□□□□ -0.55
SKA1-203ENST00000417656 CDCP1Q9H5V8 836 aa11.61□□□□□ -0.55
SKA1-203ENST00000417656 CXorf21Q9HAI6 301 aa11.61□□□□□ -0.55
SKA1-203ENST00000417656 GIMAP4Q9NUV9 329 aa11.61□□□□□ -0.55
SKA1-203ENST00000417656 INTS9Q9NV88 658 aaKnown RBP11.61□□□□□ -0.55
SKA1-203ENST00000417656 EHD3Q9NZN3 535 aa11.61□□□□□ -0.55
SKA1-203ENST00000417656 BAIAP2L1Q9UHR4 511 aa11.61□□□□□ -0.55
SKA1-203ENST00000417656 TEKT2Q9UIF3 430 aa11.61□□□□□ -0.55
SKA1-203ENST00000417656 ENTPD4Q9Y227 616 aa11.61□□□□□ -0.55
SKA1-203ENST00000417656 ZNF780BQ9Y6R6 833 aa11.61□□□□□ -0.55
SKA1-203ENST00000417656 COL6A6A6NMZ7 2263 aa11.61□□□□□ -0.55
SKA1-203ENST00000417656 KALRNO60229 2985 aa11.61□□□□□ -0.55
SKA1-203ENST00000417656 BSNQ9UPA5 3926 aa11.6□□□□□ -0.55
SKA1-203ENST00000417656 GABRR3A8MPY1 467 aa11.6□□□□□ -0.55
SKA1-203ENST00000417656 SDHDO14521 159 aa11.6□□□□□ -0.55
SKA1-203ENST00000417656 WDPCPO95876 746 aa11.6□□□□□ -0.55
SKA1-203ENST00000417656 CLPSP04118 112 aa11.6□□□□□ -0.55
SKA1-203ENST00000417656 IGKV3-11P04433 115 aa11.6□□□□□ -0.55
SKA1-203ENST00000417656 ATP1B1P05026 303 aa11.6□□□□□ -0.55
SKA1-203ENST00000417656 SSTR4P31391 388 aa11.6□□□□□ -0.55
SKA1-203ENST00000417656 GALNSP34059 522 aa11.6□□□□□ -0.55
SKA1-203ENST00000417656 PTGR1Q14914 329 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms