RNA–Protein interactions for RNA: ENST00000417448.1

VCP-202, Transcript of valosin containing protein, humanhuman

TSL 3

Gene VCP, Length 722 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-202ENST00000417448 GBAP04062 536 aa16.71■□□□□ 0.27
VCP-202ENST00000417448 ZNF24P17028 368 aa16.71■□□□□ 0.27
VCP-202ENST00000417448 ATP5A1P25705 553 aaKnown RBP16.71■□□□□ 0.27
VCP-202ENST00000417448 CHRNB4P30926 498 aa16.71■□□□□ 0.27
VCP-202ENST00000417448 PIK3CBP42338 1070 aa16.71■□□□□ 0.27
VCP-202ENST00000417448 LCP2Q13094 533 aa16.71■□□□□ 0.27
VCP-202ENST00000417448 IFT88Q13099 833 aa16.71■□□□□ 0.27
VCP-202ENST00000417448 FRMD7Q6ZUT3 714 aa16.71■□□□□ 0.27
VCP-202ENST00000417448 CHSY3Q70JA7 882 aa16.71■□□□□ 0.27
VCP-202ENST00000417448 PRIMA1Q86XR5 153 aa16.71■□□□□ 0.27
VCP-202ENST00000417448 ANKRD42Q8N9B4 389 aa16.71■□□□□ 0.27
VCP-202ENST00000417448 FAM47BQ8NA70 645 aa16.71■□□□□ 0.27
VCP-202ENST00000417448 FAM57AQ8TBR7 257 aa16.71■□□□□ 0.27
VCP-202ENST00000417448 METTL6Q8TCB7 284 aa16.71■□□□□ 0.27
VCP-202ENST00000417448 SELENOMQ8WWX9 145 aa16.71■□□□□ 0.27
VCP-202ENST00000417448 TSLPQ969D9 159 aa16.71■□□□□ 0.27
VCP-202ENST00000417448 CSF3RQ99062 836 aa16.71■□□□□ 0.27
VCP-202ENST00000417448 MAPKAP1Q9BPZ7 522 aa16.71■□□□□ 0.27
VCP-202ENST00000417448 ELOVL6Q9H5J4 265 aa16.71■□□□□ 0.27
VCP-202ENST00000417448 COPS7BQ9H9Q2 264 aaPredicted RBP16.71■□□□□ 0.27
VCP-202ENST00000417448 KCNJ16Q9NPI9 418 aa16.71■□□□□ 0.27
VCP-202ENST00000417448 LANCL2Q9NS86 450 aa16.71■□□□□ 0.27
VCP-202ENST00000417448 TRPS1Q9UHF7 1281 aa16.71■□□□□ 0.27
VCP-202ENST00000417448 FBXW2Q9UKT8 454 aa16.71■□□□□ 0.27
VCP-202ENST00000417448 FIS1Q9Y3D6 152 aa16.71■□□□□ 0.27
VCP-202ENST00000417448 KIAA1324LA8MWY0 1029 aaPredicted RBP16.7■□□□□ 0.26
VCP-202ENST00000417448 B3GALT2O43825 422 aa16.7■□□□□ 0.26
VCP-202ENST00000417448 EEDO75530 441 aaKnown RBP16.7■□□□□ 0.26
VCP-202ENST00000417448 CTAG2O75638 210 aa16.7■□□□□ 0.26
VCP-202ENST00000417448 TPOP07202 933 aa16.7■□□□□ 0.26
VCP-202ENST00000417448 SP1P08047 785 aa16.7■□□□□ 0.26
VCP-202ENST00000417448 PTX3P26022 381 aaPredicted RBP16.7■□□□□ 0.26
VCP-202ENST00000417448 GSTM2P28161 218 aa16.7■□□□□ 0.26
VCP-202ENST00000417448 HMOX2P30519 316 aa16.7■□□□□ 0.26
VCP-202ENST00000417448 ARRB2P32121 409 aa16.7■□□□□ 0.26
VCP-202ENST00000417448 ETV4P43268 484 aa16.7■□□□□ 0.26
VCP-202ENST00000417448 SSR2P43308 183 aa16.7■□□□□ 0.26
VCP-202ENST00000417448 RAP1GDS1P52306 607 aa16.7■□□□□ 0.26
VCP-202ENST00000417448 MAGOHP61326 146 aaKnown RBP16.7■□□□□ 0.26
VCP-202ENST00000417448 MEP1AQ16819 746 aa16.7■□□□□ 0.26
VCP-202ENST00000417448 AP5B1Q2VPB7 878 aa16.7■□□□□ 0.26
VCP-202ENST00000417448 GGTA1PQ4G0N0 100 aa16.7■□□□□ 0.26
VCP-202ENST00000417448 ZNF468Q5VIY5 522 aaPredicted RBP16.7■□□□□ 0.26
VCP-202ENST00000417448 OR4C11Q6IEV9 310 aa16.7■□□□□ 0.26
VCP-202ENST00000417448 CCDC71Q8IV32 467 aaPredicted RBP16.7■□□□□ 0.26
VCP-202ENST00000417448 ACOT4Q8N9L9 421 aa16.7■□□□□ 0.26
VCP-202ENST00000417448 MGARPQ8TDB4 240 aa16.7■□□□□ 0.26
VCP-202ENST00000417448 RGMAQ96B86 450 aa16.7■□□□□ 0.26
VCP-202ENST00000417448 TBC1D20Q96BZ9 403 aa16.7■□□□□ 0.26
VCP-202ENST00000417448 REPS1Q96D71 796 aa16.7■□□□□ 0.26
VCP-202ENST00000417448 SEC16BQ96JE7 1060 aa16.7■□□□□ 0.26
VCP-202ENST00000417448 MRPL1Q9BYD6 325 aaKnown RBP16.7■□□□□ 0.26
VCP-202ENST00000417448 ZNF395Q9H8N7 513 aaPredicted RBP16.7■□□□□ 0.26
VCP-202ENST00000417448 KCNK13Q9HB14 408 aa16.7■□□□□ 0.26
VCP-202ENST00000417448 SENP1Q9P0U3 644 aa16.7■□□□□ 0.26
VCP-202ENST00000417448 PLEKHA6Q9Y2H5 1048 aa16.7■□□□□ 0.26
VCP-202ENST00000417448 ZNF407Q9C0G0 2248 aa16.7■□□□□ 0.26
VCP-202ENST00000417448 STAB1Q9NY15 2570 aa16.69■□□□□ 0.26
VCP-202ENST00000417448 A0A1B0GTH9 108 aa16.69■□□□□ 0.26
VCP-202ENST00000417448 GABRR3A8MPY1 467 aa16.69■□□□□ 0.26
VCP-202ENST00000417448 PROM1O43490 865 aa16.69■□□□□ 0.26
VCP-202ENST00000417448 CHRNGP07510 517 aa16.69■□□□□ 0.26
VCP-202ENST00000417448 BPGMP07738 259 aa16.69■□□□□ 0.26
VCP-202ENST00000417448 FHP07954 510 aa16.69■□□□□ 0.26
VCP-202ENST00000417448 RNH1P13489 461 aaKnown RBP16.69■□□□□ 0.26
VCP-202ENST00000417448 MAOAP21397 527 aa16.69■□□□□ 0.26
VCP-202ENST00000417448 PTGS2P35354 604 aa16.69■□□□□ 0.26
VCP-202ENST00000417448 MTTPP55157 894 aa16.69■□□□□ 0.26
VCP-202ENST00000417448 LIM2P55344 173 aa16.69■□□□□ 0.26
VCP-202ENST00000417448 RHAGQ02094 409 aa16.69■□□□□ 0.26
VCP-202ENST00000417448 ABRAXAS2Q15018 415 aa16.69■□□□□ 0.26
VCP-202ENST00000417448 CLEC6AQ6EIG7 209 aa16.69■□□□□ 0.26
VCP-202ENST00000417448 SLC25A25Q6KCM7 469 aa16.69■□□□□ 0.26
VCP-202ENST00000417448 CPEB2Q7Z5Q1 589 aaKnown RBP16.69■□□□□ 0.26
VCP-202ENST00000417448 BIVMQ86UB2 503 aa16.69■□□□□ 0.26
VCP-202ENST00000417448 FAM98AQ8NCA5 519 aaKnown RBP16.69■□□□□ 0.26
VCP-202ENST00000417448 UCN3Q969E3 161 aa16.69■□□□□ 0.26
VCP-202ENST00000417448 KCNC2Q96PR1 638 aa16.69■□□□□ 0.26
VCP-202ENST00000417448 SERINC2Q96SA4 455 aa16.69■□□□□ 0.26
VCP-202ENST00000417448 PAIP2Q9BPZ3 127 aaKnown RBP16.69■□□□□ 0.26
VCP-202ENST00000417448 TBCDQ9BTW9 1192 aa16.69■□□□□ 0.26
VCP-202ENST00000417448 REPIN1Q9BWE0 567 aaKnown RBP16.69■□□□□ 0.26
VCP-202ENST00000417448 ADGRE2Q9UHX3 823 aa16.69■□□□□ 0.26
VCP-202ENST00000417448 MID2Q9UJV3 735 aa16.69■□□□□ 0.26
VCP-202ENST00000417448 SLC12A4Q9UP95 1085 aa16.69■□□□□ 0.26
VCP-202ENST00000417448 TSC22D4Q9Y3Q8 395 aa16.69■□□□□ 0.26
VCP-202ENST00000417448 FBN1P35555 2871 aaKnown RBP16.69■□□□□ 0.26
VCP-202ENST00000417448 WASHC1A8K0Z3 465 aa16.68■□□□□ 0.26
VCP-202ENST00000417448 A8MUA0 341 aa16.68■□□□□ 0.26
VCP-202ENST00000417448 FOXE1O00358 373 aaPredicted RBP16.68■□□□□ 0.26
VCP-202ENST00000417448 PRKRAO75569 313 aaKnown RBP16.68■□□□□ 0.26
VCP-202ENST00000417448 ESRRBO95718 433 aa16.68■□□□□ 0.26
VCP-202ENST00000417448 SERPINB1P30740 379 aa16.68■□□□□ 0.26
VCP-202ENST00000417448 BSGP35613 385 aa16.68■□□□□ 0.26
VCP-202ENST00000417448 SERPINB4P48594 390 aa16.68■□□□□ 0.26
VCP-202ENST00000417448 PKNOX1P55347 436 aa16.68■□□□□ 0.26
VCP-202ENST00000417448 PHEXP78562 749 aa16.68■□□□□ 0.26
VCP-202ENST00000417448 OC90Q02509 493 aaPredicted RBP16.68■□□□□ 0.26
VCP-202ENST00000417448 BTKQ06187 659 aa16.68■□□□□ 0.26
VCP-202ENST00000417448 TGM3Q08188 693 aa16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms