RNA–Protein interactions for RNA: ENST00000417137.5

SMARCB1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 3

Gene SMARCB1, Length 889 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-205ENST00000417137 MAD2L1Q13257 205 aaPredicted RBP21.52■■□□□ 1.04
SMARCB1-205ENST00000417137 SPRED3Q2MJR0 410 aa21.52■■□□□ 1.04
SMARCB1-205ENST00000417137 ACER2Q5QJU3 275 aa21.52■■□□□ 1.04
SMARCB1-205ENST00000417137 B3GNTL1Q67FW5 361 aaPredicted RBP21.52■■□□□ 1.04
SMARCB1-205ENST00000417137 FAM71E1Q6IPT2 247 aa21.52■■□□□ 1.04
SMARCB1-205ENST00000417137 HSDL2Q6YN16 418 aa21.52■■□□□ 1.04
SMARCB1-205ENST00000417137 RPS19BP1Q86WX3 136 aaKnown RBP21.52■■□□□ 1.04
SMARCB1-205ENST00000417137 MMP21Q8N119 569 aa21.52■■□□□ 1.04
SMARCB1-205ENST00000417137 KIF2BQ8N4N8 673 aa21.52■■□□□ 1.04
SMARCB1-205ENST00000417137 AMER2Q8N7J2 671 aa21.52■■□□□ 1.04
SMARCB1-205ENST00000417137 PUM2Q8TB72 1066 aaKnown RBP eCLIP21.52■■□□□ 1.04
SMARCB1-205ENST00000417137 LRRC8CQ8TDW0 803 aa21.52■■□□□ 1.04
SMARCB1-205ENST00000417137 C3orf30Q96M34 536 aa21.52■■□□□ 1.04
SMARCB1-205ENST00000417137 PNPOQ9NVS9 261 aa21.52■■□□□ 1.04
SMARCB1-205ENST00000417137 CDK2AP1O14519 115 aa21.51■■□□□ 1.03
SMARCB1-205ENST00000417137 DDAH2O95865 285 aa21.51■■□□□ 1.03
SMARCB1-205ENST00000417137 FEN1P39748 380 aaKnown RBP21.51■■□□□ 1.03
SMARCB1-205ENST00000417137 ASMTP46597 345 aa21.51■■□□□ 1.03
SMARCB1-205ENST00000417137 ARG2P78540 354 aa21.51■■□□□ 1.03
SMARCB1-205ENST00000417137 ZNF267Q14586 743 aaPredicted RBP21.51■■□□□ 1.03
SMARCB1-205ENST00000417137 SMU1Q2TAY7 513 aa21.51■■□□□ 1.03
SMARCB1-205ENST00000417137 C6orf136Q5SQH8 315 aa21.51■■□□□ 1.03
SMARCB1-205ENST00000417137 ZNF843Q8N446 348 aa21.51■■□□□ 1.03
SMARCB1-205ENST00000417137 FNDC5Q8NAU1 212 aa21.51■■□□□ 1.03
SMARCB1-205ENST00000417137 OR5L2Q8NGL0 311 aa21.51■■□□□ 1.03
SMARCB1-205ENST00000417137 OR8K3Q8NH51 312 aa21.51■■□□□ 1.03
SMARCB1-205ENST00000417137 HAS2Q92819 552 aa21.51■■□□□ 1.03
SMARCB1-205ENST00000417137 FBXL20Q96IG2 436 aa21.51■■□□□ 1.03
SMARCB1-205ENST00000417137 RNF32Q9H0A6 362 aa21.51■■□□□ 1.03
SMARCB1-205ENST00000417137 CDCP1Q9H5V8 836 aa21.51■■□□□ 1.03
SMARCB1-205ENST00000417137 ZBTB20Q9HC78 741 aaPredicted RBP21.51■■□□□ 1.03
SMARCB1-205ENST00000417137 ENTPD4Q9Y227 616 aa21.51■■□□□ 1.03
SMARCB1-205ENST00000417137 B8ZZF3 427 aa21.5■■□□□ 1.03
SMARCB1-205ENST00000417137 FCHO1O14526 889 aa21.5■■□□□ 1.03
SMARCB1-205ENST00000417137 PRPS2P11908 318 aa21.5■■□□□ 1.03
SMARCB1-205ENST00000417137 DDX5P17844 614 aaKnown RBP21.5■■□□□ 1.03
SMARCB1-205ENST00000417137 NT5EP21589 574 aa21.5■■□□□ 1.03
SMARCB1-205ENST00000417137 OCRLQ01968 901 aa21.5■■□□□ 1.03
SMARCB1-205ENST00000417137 FCRLBQ6BAA4 426 aa21.5■■□□□ 1.03
SMARCB1-205ENST00000417137 CRLF3Q8IUI8 442 aa21.5■■□□□ 1.03
SMARCB1-205ENST00000417137 GALNT12Q8IXK2 581 aa21.5■■□□□ 1.03
SMARCB1-205ENST00000417137 LRRC25Q8N386 305 aaPredicted RBP21.5■■□□□ 1.03
SMARCB1-205ENST00000417137 RBMXL3Q8N7X1 1067 aaKnown RBP21.5■■□□□ 1.03
SMARCB1-205ENST00000417137 ZNF721Q8TF20 911 aa21.5■■□□□ 1.03
SMARCB1-205ENST00000417137 EXOSC8Q96B26 276 aaKnown RBP21.5■■□□□ 1.03
SMARCB1-205ENST00000417137 CNPPD1Q9BV87 410 aa21.5■■□□□ 1.03
SMARCB1-205ENST00000417137 CXorf21Q9HAI6 301 aa21.5■■□□□ 1.03
SMARCB1-205ENST00000417137 SLC35C2Q9NQQ7 365 aa21.5■■□□□ 1.03
SMARCB1-205ENST00000417137 TAS2R7Q9NYW3 318 aa21.5■■□□□ 1.03
SMARCB1-205ENST00000417137 EIF3LQ9Y262 564 aaKnown RBP21.5■■□□□ 1.03
SMARCB1-205ENST00000417137 FLNBO75369 2602 aaKnown RBP21.49■■□□□ 1.03
SMARCB1-205ENST00000417137 TRPC5OSA6NMA1 111 aa21.49■■□□□ 1.03
SMARCB1-205ENST00000417137 ATP1B1P05026 303 aa21.49■■□□□ 1.03
SMARCB1-205ENST00000417137 BCKDHAP12694 445 aa21.49■■□□□ 1.03
SMARCB1-205ENST00000417137 SDC1P18827 310 aa21.49■■□□□ 1.03
SMARCB1-205ENST00000417137 TACR1P25103 407 aa21.49■■□□□ 1.03
SMARCB1-205ENST00000417137 MPIP34949 423 aa21.49■■□□□ 1.03
SMARCB1-205ENST00000417137 HK2P52789 917 aa21.49■■□□□ 1.03
SMARCB1-205ENST00000417137 EMX2Q04743 252 aa21.49■■□□□ 1.03
SMARCB1-205ENST00000417137 ZNF750Q32MQ0 723 aa21.49■■□□□ 1.03
SMARCB1-205ENST00000417137 DGAT2L6Q6ZPD8 337 aa21.49■■□□□ 1.03
SMARCB1-205ENST00000417137 TICAM1Q8IUC6 712 aa21.49■■□□□ 1.03
SMARCB1-205ENST00000417137 LRRC34Q8IZ02 419 aa21.49■■□□□ 1.03
SMARCB1-205ENST00000417137 CNRIP1Q96F85 164 aaPredicted RBP21.49■■□□□ 1.03
SMARCB1-205ENST00000417137 PPP1R36Q96LQ0 422 aa21.49■■□□□ 1.03
SMARCB1-205ENST00000417137 ZNF681Q96N22 645 aa21.49■■□□□ 1.03
SMARCB1-205ENST00000417137 TSSK3Q96PN8 268 aa21.49■■□□□ 1.03
SMARCB1-205ENST00000417137 BBS4Q96RK4 519 aa21.49■■□□□ 1.03
SMARCB1-205ENST00000417137 MFRPQ9BY79 579 aa21.49■■□□□ 1.03
SMARCB1-205ENST00000417137 NUF2Q9BZD4 464 aa21.49■■□□□ 1.03
SMARCB1-205ENST00000417137 B3GNT3Q9Y2A9 372 aa21.49■■□□□ 1.03
SMARCB1-205ENST00000417137 KALRNO60229 2985 aa21.49■■□□□ 1.03
SMARCB1-205ENST00000417137 HDAC3O15379 428 aa21.48■■□□□ 1.03
SMARCB1-205ENST00000417137 WDPCPO95876 746 aa21.48■■□□□ 1.03
SMARCB1-205ENST00000417137 MLF1P58340 268 aa21.48■■□□□ 1.03
SMARCB1-205ENST00000417137 ERVK-8P63133 956 aa21.48■■□□□ 1.03
SMARCB1-205ENST00000417137 TLR1Q15399 786 aa21.48■■□□□ 1.03
SMARCB1-205ENST00000417137 IL23RQ5VWK5 629 aa21.48■■□□□ 1.03
SMARCB1-205ENST00000417137 R3HCC1LQ7Z5L2 792 aaKnown RBP21.48■■□□□ 1.03
SMARCB1-205ENST00000417137 CCDC116Q8IYX3 515 aa21.48■■□□□ 1.03
SMARCB1-205ENST00000417137 ARMC10Q8N2F6 343 aa21.48■■□□□ 1.03
SMARCB1-205ENST00000417137 PNPLA2Q96AD5 504 aa21.48■■□□□ 1.03
SMARCB1-205ENST00000417137 EGLN2Q96KS0 407 aa21.48■■□□□ 1.03
SMARCB1-205ENST00000417137 AKTIPQ9H8T0 292 aa21.48■■□□□ 1.03
SMARCB1-205ENST00000417137 MEAF6Q9HAF1 191 aa21.48■■□□□ 1.03
SMARCB1-205ENST00000417137 MED4Q9NPJ6 270 aa21.48■■□□□ 1.03
SMARCB1-205ENST00000417137 PLA2G3Q9NZ20 509 aa21.48■■□□□ 1.03
SMARCB1-205ENST00000417137 GIMAP2Q9UG22 337 aa21.48■■□□□ 1.03
SMARCB1-205ENST00000417137 BAIAP2L1Q9UHR4 511 aa21.48■■□□□ 1.03
SMARCB1-205ENST00000417137 ZNF223Q9UK11 482 aaPredicted RBP21.48■■□□□ 1.03
SMARCB1-205ENST00000417137 ERVK-19Q9WJR5 959 aa21.48■■□□□ 1.03
SMARCB1-205ENST00000417137 PIEZO2Q9H5I5 2752 aa21.48■■□□□ 1.03
SMARCB1-205ENST00000417137 ATMQ13315 3056 aa21.47■■□□□ 1.03
SMARCB1-205ENST00000417137 A0A1W2PS29 197 aa21.47■■□□□ 1.03
SMARCB1-205ENST00000417137 OR6C76A6NM76 312 aa21.47■■□□□ 1.03
SMARCB1-205ENST00000417137 C1QL1O75973 258 aa21.47■■□□□ 1.03
SMARCB1-205ENST00000417137 IGKV3-11P04433 115 aa21.47■■□□□ 1.03
SMARCB1-205ENST00000417137 JUNP05412 331 aaKnown RBP21.47■■□□□ 1.03
SMARCB1-205ENST00000417137 KITP10721 976 aa21.47■■□□□ 1.03
SMARCB1-205ENST00000417137 RPL3P39023 403 aaKnown RBP21.47■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms