RNA–Protein interactions for RNA: ENST00000415585.6

CSTF2-203, Transcript of cleavage stimulation factor subunit 2, humanhuman

TSL 1 (best) BASIC

Gene CSTF2, Length 2,074 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF2-203ENST00000415585 GDPD3Q7L5L3 318 aa12.61□□□□□ -0.39
CSTF2-203ENST00000415585 AKAP14Q86UN6 197 aa12.61□□□□□ -0.39
CSTF2-203ENST00000415585 NUDT13Q86X67 352 aa12.61□□□□□ -0.39
CSTF2-203ENST00000415585 ETFBKMTQ8IXQ9 262 aa12.61□□□□□ -0.39
CSTF2-203ENST00000415585 SLC34A3Q8N130 599 aa12.61□□□□□ -0.39
CSTF2-203ENST00000415585 CACTIN-AS1Q8N1I8 211 aa12.61□□□□□ -0.39
CSTF2-203ENST00000415585 CELF5Q8N6W0 485 aaKnown RBP12.61□□□□□ -0.39
CSTF2-203ENST00000415585 SLC7A13Q8TCU3 470 aa12.61□□□□□ -0.39
CSTF2-203ENST00000415585 UCN3Q969E3 161 aa12.61□□□□□ -0.39
CSTF2-203ENST00000415585 RSPRY1Q96DX4 576 aa12.61□□□□□ -0.39
CSTF2-203ENST00000415585 ZBED6CLQ96FA7 236 aaPredicted RBP12.61□□□□□ -0.39
CSTF2-203ENST00000415585 PRAP1Q96NZ9 151 aa12.61□□□□□ -0.39
CSTF2-203ENST00000415585 QRFPRQ96P65 431 aa12.61□□□□□ -0.39
CSTF2-203ENST00000415585 TEFMQ96QE5 360 aaKnown RBP12.61□□□□□ -0.39
CSTF2-203ENST00000415585 TREX2Q9BQ50 279 aaPredicted RBP12.61□□□□□ -0.39
CSTF2-203ENST00000415585 MENTQ9BUN1 341 aa12.61□□□□□ -0.39
CSTF2-203ENST00000415585 CNPPD1Q9BV87 410 aa12.61□□□□□ -0.39
CSTF2-203ENST00000415585 POLR2J3Q9H1A7 115 aaKnown RBP12.61□□□□□ -0.39
CSTF2-203ENST00000415585 EXOSC4Q9NPD3 245 aaKnown RBP12.61□□□□□ -0.39
CSTF2-203ENST00000415585 TM7SF3Q9NS93 570 aa12.61□□□□□ -0.39
CSTF2-203ENST00000415585 COL4A3Q01955 1670 aa12.61□□□□□ -0.39
CSTF2-203ENST00000415585 LOC110117498-PIK3R3F6TDL0 507 aa12.6□□□□□ -0.39
CSTF2-203ENST00000415585 CACNB4O00305 520 aaPredicted RBP12.6□□□□□ -0.39
CSTF2-203ENST00000415585 NDUFS4O43181 175 aa12.6□□□□□ -0.39
CSTF2-203ENST00000415585 FGBP02675 491 aa12.6□□□□□ -0.39
CSTF2-203ENST00000415585 TP53P04637 393 aaPredicted RBP12.6□□□□□ -0.39
CSTF2-203ENST00000415585 OR12D1P0DN82 309 aa12.6□□□□□ -0.39
CSTF2-203ENST00000415585 DDX5P17844 614 aaKnown RBP12.6□□□□□ -0.39
CSTF2-203ENST00000415585 ENDOUP21128 410 aaKnown RBP12.6□□□□□ -0.39
CSTF2-203ENST00000415585 ZNF91Q05481 1191 aa12.6□□□□□ -0.39
CSTF2-203ENST00000415585 TARDBPQ13148 414 aaKnown RBP eCLIP12.6□□□□□ -0.39
CSTF2-203ENST00000415585 KRR1Q13601 381 aaKnown RBP12.6□□□□□ -0.39
CSTF2-203ENST00000415585 NCF4Q15080 339 aa12.6□□□□□ -0.39
CSTF2-203ENST00000415585 SPHARQ15513 63 aa12.6□□□□□ -0.39
CSTF2-203ENST00000415585 SYPL1Q16563 259 aa12.6□□□□□ -0.39
CSTF2-203ENST00000415585 TMEM240Q5SV17 173 aa12.6□□□□□ -0.39
CSTF2-203ENST00000415585 CCBE1Q6UXH8 406 aaPredicted RBP12.6□□□□□ -0.39
CSTF2-203ENST00000415585 BCDIN3DQ7Z5W3 292 aaKnown RBP12.6□□□□□ -0.39
CSTF2-203ENST00000415585 SPRED2Q7Z698 418 aa12.6□□□□□ -0.39
CSTF2-203ENST00000415585 COMTD1Q86VU5 262 aa12.6□□□□□ -0.39
CSTF2-203ENST00000415585 TCEANCQ8N8B7 351 aa12.6□□□□□ -0.39
CSTF2-203ENST00000415585 CXorf40AQ8TE69 158 aa12.6□□□□□ -0.39
CSTF2-203ENST00000415585 POF1BQ8WVV4 589 aa12.6□□□□□ -0.39
CSTF2-203ENST00000415585 RASSF5Q8WWW0 418 aa12.6□□□□□ -0.39
CSTF2-203ENST00000415585 PIK3R3Q92569 461 aa12.6□□□□□ -0.39
CSTF2-203ENST00000415585 CEP19Q96LK0 163 aa12.6□□□□□ -0.39
CSTF2-203ENST00000415585 ASPNQ9BXN1 380 aa12.6□□□□□ -0.39
CSTF2-203ENST00000415585 MVB12BQ9H7P6 319 aa12.6□□□□□ -0.39
CSTF2-203ENST00000415585 DYRK4Q9NR20 520 aa12.6□□□□□ -0.39
CSTF2-203ENST00000415585 CRNNQ9UBG3 495 aaPredicted RBP12.6□□□□□ -0.39
CSTF2-203ENST00000415585 A4GNTQ9UNA3 340 aa12.6□□□□□ -0.39
CSTF2-203ENST00000415585 RPL36Q9Y3U8 105 aaKnown RBP12.6□□□□□ -0.39
CSTF2-203ENST00000415585 PCDHGA4Q9Y5G9 962 aa12.6□□□□□ -0.39
CSTF2-203ENST00000415585 A0A1W2PPV9 198 aa12.6□□□□□ -0.39
CSTF2-203ENST00000415585 HTR3EA5X5Y0 456 aa12.6□□□□□ -0.39
CSTF2-203ENST00000415585 PDZK1P1A8MUH7 402 aa12.6□□□□□ -0.39
CSTF2-203ENST00000415585 HEPACAM2A8MVW5 462 aa12.6□□□□□ -0.39
CSTF2-203ENST00000415585 SLITRK5O94991 958 aa12.6□□□□□ -0.39
CSTF2-203ENST00000415585 CD72P21854 359 aa12.6□□□□□ -0.39
CSTF2-203ENST00000415585 RPS19P39019 145 aaKnown RBP12.6□□□□□ -0.39
CSTF2-203ENST00000415585 DEFA1P59665 94 aa12.6□□□□□ -0.39
CSTF2-203ENST00000415585 DEFA3P59666 94 aa12.6□□□□□ -0.39
CSTF2-203ENST00000415585 PIN1Q13526 163 aaPredicted RBP12.6□□□□□ -0.39
CSTF2-203ENST00000415585 MFSD4BQ5TF39 518 aa12.6□□□□□ -0.39
CSTF2-203ENST00000415585 UBE3DQ7Z6J8 389 aa12.6□□□□□ -0.39
CSTF2-203ENST00000415585 SFTPA1Q8IWL2 248 aa12.6□□□□□ -0.39
CSTF2-203ENST00000415585 AMER3Q8N944 861 aa12.6□□□□□ -0.39
CSTF2-203ENST00000415585 OR5D16Q8NGK9 328 aa12.6□□□□□ -0.39
CSTF2-203ENST00000415585 OR8J1Q8NGP2 316 aa12.6□□□□□ -0.39
CSTF2-203ENST00000415585 RGMAQ96B86 450 aa12.6□□□□□ -0.39
CSTF2-203ENST00000415585 ZNF764Q96H86 408 aaPredicted RBP12.6□□□□□ -0.39
CSTF2-203ENST00000415585 SLC30A2Q9BRI3 323 aa12.6□□□□□ -0.39
CSTF2-203ENST00000415585 MND1Q9BWT6 205 aa12.6□□□□□ -0.39
CSTF2-203ENST00000415585 TSSK6Q9BXA6 273 aa12.6□□□□□ -0.39
CSTF2-203ENST00000415585 OR51I1Q9H343 314 aa12.6□□□□□ -0.39
CSTF2-203ENST00000415585 SMURF1Q9HCE7 757 aa12.6□□□□□ -0.39
CSTF2-203ENST00000415585 ACSS1Q9NUB1 689 aaPredicted RBP12.6□□□□□ -0.39
CSTF2-203ENST00000415585 P2RX2Q9UBL9 471 aa12.6□□□□□ -0.39
CSTF2-203ENST00000415585 M0R3H8 397 aa12.59□□□□□ -0.39
CSTF2-203ENST00000415585 NME6O75414 186 aaPredicted RBP12.59□□□□□ -0.39
CSTF2-203ENST00000415585 UGT2B17O75795 530 aa12.59□□□□□ -0.39
CSTF2-203ENST00000415585 RPN2P04844 631 aa12.59□□□□□ -0.39
CSTF2-203ENST00000415585 HBQ1P09105 142 aa12.59□□□□□ -0.39
CSTF2-203ENST00000415585 HNRNPA1P09651 372 aaKnown RBP eCLIP12.59□□□□□ -0.39
CSTF2-203ENST00000415585 TNNI3P19429 210 aa12.59□□□□□ -0.39
CSTF2-203ENST00000415585 TNFSF8P32971 234 aa12.59□□□□□ -0.39
CSTF2-203ENST00000415585 VIPR2P41587 438 aa12.59□□□□□ -0.39
CSTF2-203ENST00000415585 CRYBB2P43320 205 aa12.59□□□□□ -0.39
CSTF2-203ENST00000415585 SMIM11AP58511 58 aa12.59□□□□□ -0.39
CSTF2-203ENST00000415585 ZNF234Q14588 700 aa12.59□□□□□ -0.39
CSTF2-203ENST00000415585 OCLNQ16625 522 aa12.59□□□□□ -0.39
CSTF2-203ENST00000415585 LRIT3Q3SXY7 679 aa12.59□□□□□ -0.39
CSTF2-203ENST00000415585 ADAMTSL4Q6UY14 1074 aa12.59□□□□□ -0.39
CSTF2-203ENST00000415585 SZRD1Q7Z422 152 aa12.59□□□□□ -0.39
CSTF2-203ENST00000415585 LRRTM4Q86VH4 590 aa12.59□□□□□ -0.39
CSTF2-203ENST00000415585 MMAAQ8IVH4 418 aaKnown RBP12.59□□□□□ -0.39
CSTF2-203ENST00000415585 TBC1D19Q8N5T2 526 aa12.59□□□□□ -0.39
CSTF2-203ENST00000415585 IQCF1Q8N6M8 205 aa12.59□□□□□ -0.39
CSTF2-203ENST00000415585 NANOGP1Q8N7R0 232 aa12.59□□□□□ -0.39
CSTF2-203ENST00000415585 EFHD2Q96C19 240 aaPredicted RBP12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms