RNA–Protein interactions for RNA: ENST00000415537.1

HLA-C-204, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 782 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-204ENST00000415537 TICAM1Q8IUC6 712 aa23.09■■□□□ 1.29
HLA-C-204ENST00000415537 MYRIPQ8NFW9 859 aa23.09■■□□□ 1.29
HLA-C-204ENST00000415537 ZNF483Q8TF39 744 aaPredicted RBP23.09■■□□□ 1.29
HLA-C-204ENST00000415537 GAL3ST4Q96RP7 486 aa23.09■■□□□ 1.29
HLA-C-204ENST00000415537 MRPL1Q9BYD6 325 aaKnown RBP23.09■■□□□ 1.29
HLA-C-204ENST00000415537 PLSCR2Q9NRY7 297 aa23.09■■□□□ 1.29
HLA-C-204ENST00000415537 SNX6Q9UNH7 406 aa23.09■■□□□ 1.29
HLA-C-204ENST00000415537 SLC12A4Q9UP95 1085 aa23.09■■□□□ 1.29
HLA-C-204ENST00000415537 ITPR2Q14571 2701 aa23.09■■□□□ 1.29
HLA-C-204ENST00000415537 A0A0G2JMM0 328 aa23.08■■□□□ 1.29
HLA-C-204ENST00000415537 A0A1W2PPB8 328 aa23.08■■□□□ 1.29
HLA-C-204ENST00000415537 A0A1W2PRS3 328 aa23.08■■□□□ 1.29
HLA-C-204ENST00000415537 OR6C76A6NM76 312 aa23.08■■□□□ 1.29
HLA-C-204ENST00000415537 KIR3DP1A8MWS1 328 aa23.08■■□□□ 1.29
HLA-C-204ENST00000415537 PGRMC2O15173 223 aa23.08■■□□□ 1.29
HLA-C-204ENST00000415537 RIPK2O43353 540 aa23.08■■□□□ 1.29
HLA-C-204ENST00000415537 SLC22A10Q63ZE4 541 aa23.08■■□□□ 1.29
HLA-C-204ENST00000415537 TIFABQ6ZNK6 161 aa23.08■■□□□ 1.29
HLA-C-204ENST00000415537 SELENOMQ8WWX9 145 aa23.08■■□□□ 1.29
HLA-C-204ENST00000415537 UCN3Q969E3 161 aa23.08■■□□□ 1.29
HLA-C-204ENST00000415537 IL1RL2Q9HB29 575 aa23.08■■□□□ 1.29
HLA-C-204ENST00000415537 RYDENQ9NUL5 291 aaKnown RBP23.08■■□□□ 1.29
HLA-C-204ENST00000415537 TEX10Q9NXF1 929 aaPredicted RBP23.08■■□□□ 1.29
HLA-C-204ENST00000415537 COQ3Q9NZJ6 369 aa23.08■■□□□ 1.29
HLA-C-204ENST00000415537 GUCY1B2O75343 617 aa23.07■■□□□ 1.28
HLA-C-204ENST00000415537 SBK3P0C264 359 aa23.07■■□□□ 1.28
HLA-C-204ENST00000415537 RHOXF2BP0C7M4 288 aa23.07■■□□□ 1.28
HLA-C-204ENST00000415537 CCL3P10147 92 aa23.07■■□□□ 1.28
HLA-C-204ENST00000415537 COX6B1P14854 86 aa23.07■■□□□ 1.28
HLA-C-204ENST00000415537 TSPAN8P19075 237 aa23.07■■□□□ 1.28
HLA-C-204ENST00000415537 GCAP28676 217 aa23.07■■□□□ 1.28
HLA-C-204ENST00000415537 TBL3Q12788 808 aaKnown RBP23.07■■□□□ 1.28
HLA-C-204ENST00000415537 ZNF791Q3KP31 576 aaPredicted RBP23.07■■□□□ 1.28
HLA-C-204ENST00000415537 C6orf163Q5TEZ5 329 aa23.07■■□□□ 1.28
HLA-C-204ENST00000415537 TMEM211Q6ICI0 200 aa23.07■■□□□ 1.28
HLA-C-204ENST00000415537 LCA5Q86VQ0 697 aa23.07■■□□□ 1.28
HLA-C-204ENST00000415537 DND1Q8IYX4 353 aaKnown RBP23.07■■□□□ 1.28
HLA-C-204ENST00000415537 METTL4Q8N3J2 472 aa23.07■■□□□ 1.28
HLA-C-204ENST00000415537 TMEM151AQ8N4L1 468 aa23.07■■□□□ 1.28
HLA-C-204ENST00000415537 OR4K14Q8NGD5 310 aa23.07■■□□□ 1.28
HLA-C-204ENST00000415537 TRPC4APQ8TEL6 797 aa23.07■■□□□ 1.28
HLA-C-204ENST00000415537 TRIM44Q96DX7 344 aaPredicted RBP23.07■■□□□ 1.28
HLA-C-204ENST00000415537 SPACA9Q96E40 222 aaPredicted RBP23.07■■□□□ 1.28
HLA-C-204ENST00000415537 DMRTA2Q96SC8 542 aa23.07■■□□□ 1.28
HLA-C-204ENST00000415537 RHOXF2Q9BQY4 288 aa23.07■■□□□ 1.28
HLA-C-204ENST00000415537 C1QTNF3Q9BXJ4 246 aa23.07■■□□□ 1.28
HLA-C-204ENST00000415537 TP63Q9H3D4 680 aaPredicted RBP23.07■■□□□ 1.28
HLA-C-204ENST00000415537 ZDHHC11Q9H8X9 412 aa23.07■■□□□ 1.28
HLA-C-204ENST00000415537 FARSBQ9NSD9 589 aaKnown RBP23.07■■□□□ 1.28
HLA-C-204ENST00000415537 NMRK1Q9NWW6 199 aa23.07■■□□□ 1.28
HLA-C-204ENST00000415537 ZNF407Q9C0G0 2248 aa23.06■■□□□ 1.28
HLA-C-204ENST00000415537 PPP6CO00743 305 aa23.06■■□□□ 1.28
HLA-C-204ENST00000415537 ADAM10O14672 748 aa23.06■■□□□ 1.28
HLA-C-204ENST00000415537 SUPT7LO94864 414 aa23.06■■□□□ 1.28
HLA-C-204ENST00000415537 PDYNP01213 254 aa23.06■■□□□ 1.28
HLA-C-204ENST00000415537 SERPINB3P29508 390 aa23.06■■□□□ 1.28
HLA-C-204ENST00000415537 DNASE1L1P49184 302 aa23.06■■□□□ 1.28
HLA-C-204ENST00000415537 MAPK12P53778 367 aa23.06■■□□□ 1.28
HLA-C-204ENST00000415537 SLC37A1P57057 533 aa23.06■■□□□ 1.28
HLA-C-204ENST00000415537 CLCQ05315 142 aa23.06■■□□□ 1.28
HLA-C-204ENST00000415537 LETMD1Q6P1Q0 360 aa23.06■■□□□ 1.28
HLA-C-204ENST00000415537 MCEMP1Q8IX19 187 aa23.06■■□□□ 1.28
HLA-C-204ENST00000415537 FAM109AQ8N4B1 249 aa23.06■■□□□ 1.28
HLA-C-204ENST00000415537 CA5BP1Q8WTZ4 195 aa23.06■■□□□ 1.28
HLA-C-204ENST00000415537 WWTR1Q9GZV5 400 aa23.06■■□□□ 1.28
HLA-C-204ENST00000415537 BRF2Q9HAW0 419 aa23.06■■□□□ 1.28
HLA-C-204ENST00000415537 TMEM216Q9P0N5 145 aa23.06■■□□□ 1.28
HLA-C-204ENST00000415537 TRPS1Q9UHF7 1281 aa23.06■■□□□ 1.28
HLA-C-204ENST00000415537 DNAJC13O75165 2243 aa23.06■■□□□ 1.28
HLA-C-204ENST00000415537 A0A1B0GTL3 188 aa23.05■■□□□ 1.28
HLA-C-204ENST00000415537 GLSO94925 669 aaPredicted RBP23.05■■□□□ 1.28
HLA-C-204ENST00000415537 NADKO95544 446 aaPredicted RBP23.05■■□□□ 1.28
HLA-C-204ENST00000415537 SNRPB2P08579 225 aaKnown RBP23.05■■□□□ 1.28
HLA-C-204ENST00000415537 PRF1P14222 555 aa23.05■■□□□ 1.28
HLA-C-204ENST00000415537 HSD17B3P37058 310 aa23.05■■□□□ 1.28
HLA-C-204ENST00000415537 PIGAP37287 484 aa23.05■■□□□ 1.28
HLA-C-204ENST00000415537 MAGEA5P43359 124 aa23.05■■□□□ 1.28
HLA-C-204ENST00000415537 EBPQ15125 230 aaKnown RBP23.05■■□□□ 1.28
HLA-C-204ENST00000415537 HLA-DQA1Q5Y7H0 255 aa23.05■■□□□ 1.28
HLA-C-204ENST00000415537 GALNT12Q8IXK2 581 aa23.05■■□□□ 1.28
HLA-C-204ENST00000415537 SRRM1Q8IYB3 904 aaKnown RBP23.05■■□□□ 1.28
HLA-C-204ENST00000415537 TAGAPQ8N103 731 aa23.05■■□□□ 1.28
HLA-C-204ENST00000415537 CNPY4Q8N129 248 aa23.05■■□□□ 1.28
HLA-C-204ENST00000415537 TMEM251Q8N6I4 163 aa23.05■■□□□ 1.28
HLA-C-204ENST00000415537 FAM13CQ8NE31 585 aa23.05■■□□□ 1.28
HLA-C-204ENST00000415537 SDCCAG3Q96C92 435 aa23.05■■□□□ 1.28
HLA-C-204ENST00000415537 TUBA8Q9NY65 449 aaPredicted RBP23.05■■□□□ 1.28
HLA-C-204ENST00000415537 C2orf92A0A1B0GVN3 265 aa23.04■■□□□ 1.28
HLA-C-204ENST00000415537 NPIPA2E9PIF3 369 aa23.04■■□□□ 1.28
HLA-C-204ENST00000415537 NPIPA3F8WFD2 350 aa23.04■■□□□ 1.28
HLA-C-204ENST00000415537 OR4F21O95013 312 aa23.04■■□□□ 1.28
HLA-C-204ENST00000415537 PTGER4P35408 488 aa23.04■■□□□ 1.28
HLA-C-204ENST00000415537 DEKP35659 375 aaKnown RBP23.04■■□□□ 1.28
HLA-C-204ENST00000415537 XKP51811 444 aa23.04■■□□□ 1.28
HLA-C-204ENST00000415537 KCNJ2P63252 427 aa23.04■■□□□ 1.28
HLA-C-204ENST00000415537 SLC29A2Q14542 456 aa23.04■■□□□ 1.28
HLA-C-204ENST00000415537 ZNF678Q5SXM1 525 aa23.04■■□□□ 1.28
HLA-C-204ENST00000415537 COMMD6Q7Z4G1 85 aa23.04■■□□□ 1.28
HLA-C-204ENST00000415537 LURAP1LQ8IV03 231 aa23.04■■□□□ 1.28
HLA-C-204ENST00000415537 PAQR8Q8TEZ7 354 aa23.04■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms