RNA–Protein interactions for RNA: ENST00000415107.5

ATG4B-207, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 5

Gene ATG4B, Length 356 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-207ENST00000415107 CLNS1AP54105 237 aaKnown RBP11.12□□□□□ -0.63
ATG4B-207ENST00000415107 DIO3P55073 304 aa11.12□□□□□ -0.63
ATG4B-207ENST00000415107 POLE2P56282 527 aa11.12□□□□□ -0.63
ATG4B-207ENST00000415107 FUT7Q11130 342 aa11.12□□□□□ -0.63
ATG4B-207ENST00000415107 MAP4K2Q12851 820 aa11.12□□□□□ -0.63
ATG4B-207ENST00000415107 LSM12Q3MHD2 195 aaKnown RBP11.12□□□□□ -0.63
ATG4B-207ENST00000415107 LINC00303Q3SY05 128 aa11.12□□□□□ -0.63
ATG4B-207ENST00000415107 PDCD4Q53EL6 469 aaKnown RBP11.12□□□□□ -0.63
ATG4B-207ENST00000415107 VWA5B1Q5TIE3 1220 aa11.12□□□□□ -0.63
ATG4B-207ENST00000415107 IGFL2Q6UWQ7 119 aa11.12□□□□□ -0.63
ATG4B-207ENST00000415107 ACAD11Q709F0 780 aa11.12□□□□□ -0.63
ATG4B-207ENST00000415107 TICAM1Q8IUC6 712 aa11.12□□□□□ -0.63
ATG4B-207ENST00000415107 GALNT12Q8IXK2 581 aa11.12□□□□□ -0.63
ATG4B-207ENST00000415107 GLB1L3Q8NCI6 653 aaPredicted RBP11.12□□□□□ -0.63
ATG4B-207ENST00000415107 OR8J2Q8NGG1 315 aa11.12□□□□□ -0.63
ATG4B-207ENST00000415107 SUN3Q8TAQ9 357 aa11.12□□□□□ -0.63
ATG4B-207ENST00000415107 PSMF1Q92530 271 aa11.12□□□□□ -0.63
ATG4B-207ENST00000415107 UCN3Q969E3 161 aa11.12□□□□□ -0.63
ATG4B-207ENST00000415107 COQ8BQ96D53 544 aa11.12□□□□□ -0.63
ATG4B-207ENST00000415107 SMAD5Q99717 465 aaKnown RBP11.12□□□□□ -0.63
ATG4B-207ENST00000415107 C1orf50Q9BV19 199 aa11.12□□□□□ -0.63
ATG4B-207ENST00000415107 WDR55Q9H6Y2 383 aaPredicted RBP11.12□□□□□ -0.63
ATG4B-207ENST00000415107 ZNF160Q9HCG1 818 aa11.12□□□□□ -0.63
ATG4B-207ENST00000415107 SDR39U1Q9NRG7 319 aaPredicted RBP11.12□□□□□ -0.63
ATG4B-207ENST00000415107 ACSS1Q9NUB1 689 aaPredicted RBP11.12□□□□□ -0.63
ATG4B-207ENST00000415107 MRGBPQ9NV56 204 aa11.12□□□□□ -0.63
ATG4B-207ENST00000415107 SDAD1Q9NVU7 687 aaKnown RBP eCLIP11.12□□□□□ -0.63
ATG4B-207ENST00000415107 C5AR2Q9P296 337 aa11.12□□□□□ -0.63
ATG4B-207ENST00000415107 ZNF639Q9UID6 485 aa11.12□□□□□ -0.63
ATG4B-207ENST00000415107 G3BP2Q9UN86 482 aaKnown RBP11.12□□□□□ -0.63
ATG4B-207ENST00000415107 GPR45Q9Y5Y3 372 aa11.12□□□□□ -0.63
ATG4B-207ENST00000415107 CLCA3PQ9Y6N3 262 aa11.12□□□□□ -0.63
ATG4B-207ENST00000415107 ZNF780BQ9Y6R6 833 aa11.12□□□□□ -0.63
ATG4B-207ENST00000415107 SCN2AQ99250 2005 aa11.11□□□□□ -0.63
ATG4B-207ENST00000415107 A0A087WV62 115 aa11.11□□□□□ -0.63
ATG4B-207ENST00000415107 IGHV3-20A0A0C4DH32 117 aa11.11□□□□□ -0.63
ATG4B-207ENST00000415107 OR6C76A6NM76 312 aa11.11□□□□□ -0.63
ATG4B-207ENST00000415107 WASHC1A8K0Z3 465 aa11.11□□□□□ -0.63
ATG4B-207ENST00000415107 GABRR3A8MPY1 467 aa11.11□□□□□ -0.63
ATG4B-207ENST00000415107 C17orf105B2RV13 164 aa11.11□□□□□ -0.63
ATG4B-207ENST00000415107 PLOD2O00469 737 aa11.11□□□□□ -0.63
ATG4B-207ENST00000415107 POLR3GO15318 223 aaPredicted RBP11.11□□□□□ -0.63
ATG4B-207ENST00000415107 OR10H2O60403 315 aa11.11□□□□□ -0.63
ATG4B-207ENST00000415107 DIAPH2O60879 1101 aa11.11□□□□□ -0.63
ATG4B-207ENST00000415107 IFNA16P05015 189 aa11.11□□□□□ -0.63
ATG4B-207ENST00000415107 TROVE2P10155 538 aaKnown RBP eCLIP11.11□□□□□ -0.63
ATG4B-207ENST00000415107 SFTPCP11686 197 aa11.11□□□□□ -0.63
ATG4B-207ENST00000415107 MPIP34949 423 aa11.11□□□□□ -0.63
ATG4B-207ENST00000415107 ALDH9A1P49189 494 aa11.11□□□□□ -0.63
ATG4B-207ENST00000415107 IDH3AP50213 366 aa11.11□□□□□ -0.63
ATG4B-207ENST00000415107 ATP4BP51164 291 aa11.11□□□□□ -0.63
ATG4B-207ENST00000415107 CLCN2P51788 898 aa11.11□□□□□ -0.63
ATG4B-207ENST00000415107 AQP5P55064 265 aa11.11□□□□□ -0.63
ATG4B-207ENST00000415107 MGAT2Q10469 447 aa11.11□□□□□ -0.63
ATG4B-207ENST00000415107 PRICKLE4Q2TBC4 344 aa11.11□□□□□ -0.63
ATG4B-207ENST00000415107 BTBD16Q32M84 506 aa11.11□□□□□ -0.63
ATG4B-207ENST00000415107 ZNF628Q5EBL2 1059 aa11.11□□□□□ -0.63
ATG4B-207ENST00000415107 CRB2Q5IJ48 1285 aa11.11□□□□□ -0.63
ATG4B-207ENST00000415107 METTL21CQ5VZV1 264 aa11.11□□□□□ -0.63
ATG4B-207ENST00000415107 TCTN3Q6NUS6 607 aa11.11□□□□□ -0.63
ATG4B-207ENST00000415107 IGFL3Q6UXB1 125 aa11.11□□□□□ -0.63
ATG4B-207ENST00000415107 OR4N5Q8IXE1 308 aa11.11□□□□□ -0.63
ATG4B-207ENST00000415107 C17orf47Q8NEP4 570 aa11.11□□□□□ -0.63
ATG4B-207ENST00000415107 OR7G1Q8NGA0 311 aa11.11□□□□□ -0.63
ATG4B-207ENST00000415107 PSMA8Q8TAA3 256 aa11.11□□□□□ -0.63
ATG4B-207ENST00000415107 NUBPLQ8TB37 319 aa11.11□□□□□ -0.63
ATG4B-207ENST00000415107 SLC2A12Q8TD20 617 aa11.11□□□□□ -0.63
ATG4B-207ENST00000415107 ZNF721Q8TF20 911 aa11.11□□□□□ -0.63
ATG4B-207ENST00000415107 EXTL1Q92935 676 aa11.11□□□□□ -0.63
ATG4B-207ENST00000415107 RIT1Q92963 219 aa11.11□□□□□ -0.63
ATG4B-207ENST00000415107 PPCDCQ96CD2 204 aa11.11□□□□□ -0.63
ATG4B-207ENST00000415107 ZBED6CLQ96FA7 236 aaPredicted RBP11.11□□□□□ -0.63
ATG4B-207ENST00000415107 PPP1R36Q96LQ0 422 aa11.11□□□□□ -0.63
ATG4B-207ENST00000415107 OR52B2Q96RD2 323 aa11.11□□□□□ -0.63
ATG4B-207ENST00000415107 PRPF18Q99633 342 aaKnown RBP11.11□□□□□ -0.63
ATG4B-207ENST00000415107 BHLHE41Q9C0J9 482 aaPredicted RBP11.11□□□□□ -0.63
ATG4B-207ENST00000415107 RNF32Q9H0A6 362 aa11.11□□□□□ -0.63
ATG4B-207ENST00000415107 CLMPQ9H6B4 373 aa11.11□□□□□ -0.63
ATG4B-207ENST00000415107 KCNK13Q9HB14 408 aa11.11□□□□□ -0.63
ATG4B-207ENST00000415107 PNO1Q9NRX1 252 aaKnown RBP11.11□□□□□ -0.63
ATG4B-207ENST00000415107 ATAD3AQ9NVI7 634 aa11.11□□□□□ -0.63
ATG4B-207ENST00000415107 MAT2BQ9NZL9 334 aa11.11□□□□□ -0.63
ATG4B-207ENST00000415107 ZIM2Q9NZV7 527 aa11.11□□□□□ -0.63
ATG4B-207ENST00000415107 BSNQ9UPA5 3926 aa11.11□□□□□ -0.63
ATG4B-207ENST00000415107 MED13Q9UHV7 2174 aa11.11□□□□□ -0.63
ATG4B-207ENST00000415107 CPAMD8Q8IZJ3 1885 aa11.1□□□□□ -0.63
ATG4B-207ENST00000415107 MKRN2OSH3BPM6 223 aa11.1□□□□□ -0.63
ATG4B-207ENST00000415107 PDPK1O15530 556 aa11.1□□□□□ -0.63
ATG4B-207ENST00000415107 PLOD3O60568 738 aa11.1□□□□□ -0.63
ATG4B-207ENST00000415107 ERAL1O75616 437 aaKnown RBP11.1□□□□□ -0.63
ATG4B-207ENST00000415107 BCAS2O75934 225 aaPredicted RBP11.1□□□□□ -0.63
ATG4B-207ENST00000415107 CLPSP04118 112 aa11.1□□□□□ -0.63
ATG4B-207ENST00000415107 ALPPP05187 535 aa11.1□□□□□ -0.63
ATG4B-207ENST00000415107 NTSP30990 170 aa11.1□□□□□ -0.63
ATG4B-207ENST00000415107 SOX18P35713 384 aa11.1□□□□□ -0.63
ATG4B-207ENST00000415107 ID2Q02363 134 aa11.1□□□□□ -0.63
ATG4B-207ENST00000415107 SRSF11Q05519 484 aaKnown RBP11.1□□□□□ -0.63
ATG4B-207ENST00000415107 MPEG1Q2M385 716 aa11.1□□□□□ -0.63
ATG4B-207ENST00000415107 ZNF385BQ569K4 471 aa11.1□□□□□ -0.63
ATG4B-207ENST00000415107 IRAK1BP1Q5VVH5 260 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms