RNA–Protein interactions for RNA: ENST00000414711.5

CPNE1-208, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 673 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-208ENST00000414711 EIF2B3Q9NR50 452 aaKnown RBP14.3□□□□□ -0.12
CPNE1-208ENST00000414711 E7EVH7 732 aa14.29□□□□□ -0.12
CPNE1-208ENST00000414711 KLF4O43474 513 aa14.29□□□□□ -0.12
CPNE1-208ENST00000414711 CTNSO60931 367 aa14.29□□□□□ -0.12
CPNE1-208ENST00000414711 VAPBO95292 243 aa14.29□□□□□ -0.12
CPNE1-208ENST00000414711 SERPINA6P08185 405 aa14.29□□□□□ -0.12
CPNE1-208ENST00000414711 SOD3P08294 240 aa14.29□□□□□ -0.12
CPNE1-208ENST00000414711 PAMP19021 973 aa14.29□□□□□ -0.12
CPNE1-208ENST00000414711 CHMP24386 653 aa14.29□□□□□ -0.12
CPNE1-208ENST00000414711 RPL22P35268 128 aaKnown RBP14.29□□□□□ -0.12
CPNE1-208ENST00000414711 GCKP35557 465 aa14.29□□□□□ -0.12
CPNE1-208ENST00000414711 MSH2P43246 934 aa14.29□□□□□ -0.12
CPNE1-208ENST00000414711 REEP5Q00765 189 aa14.29□□□□□ -0.12
CPNE1-208ENST00000414711 NTRK2Q16620 822 aa14.29□□□□□ -0.12
CPNE1-208ENST00000414711 WHAMMP3Q1A5X7 153 aa14.29□□□□□ -0.12
CPNE1-208ENST00000414711 ANKRD34AQ69YU3 496 aa14.29□□□□□ -0.12
CPNE1-208ENST00000414711 BICRALQ6AI39 1079 aa14.29□□□□□ -0.12
CPNE1-208ENST00000414711 IL17RELQ6ZVW7 336 aa14.29□□□□□ -0.12
CPNE1-208ENST00000414711 PACS2Q86VP3 889 aa14.29□□□□□ -0.12
CPNE1-208ENST00000414711 PPM1NQ8N819 430 aa14.29□□□□□ -0.12
CPNE1-208ENST00000414711 ATL1Q8WXF7 558 aa14.29□□□□□ -0.12
CPNE1-208ENST00000414711 GAL3ST3Q96A11 431 aa14.29□□□□□ -0.12
CPNE1-208ENST00000414711 PGM2Q96G03 612 aa14.29□□□□□ -0.12
CPNE1-208ENST00000414711 SNF8Q96H20 258 aa14.29□□□□□ -0.12
CPNE1-208ENST00000414711 TNFRSF13CQ96RJ3 184 aa14.29□□□□□ -0.12
CPNE1-208ENST00000414711 KRT12Q99456 494 aa14.29□□□□□ -0.12
CPNE1-208ENST00000414711 TMEM204Q9BSN7 226 aa14.29□□□□□ -0.12
CPNE1-208ENST00000414711 L2HGDHQ9H9P8 463 aa14.29□□□□□ -0.12
CPNE1-208ENST00000414711 ETNK1Q9HBU6 452 aa14.29□□□□□ -0.12
CPNE1-208ENST00000414711 KLHL42Q9P2K6 505 aa14.29□□□□□ -0.12
CPNE1-208ENST00000414711 ADAMTS6Q9UKP5 1117 aa14.29□□□□□ -0.12
CPNE1-208ENST00000414711 PDE10AQ9Y233 779 aa14.29□□□□□ -0.12
CPNE1-208ENST00000414711 FREM1Q5H8C1 2179 aa14.29□□□□□ -0.12
CPNE1-208ENST00000414711 IGHV4-30-2A0A087WSY4 118 aa14.28□□□□□ -0.12
CPNE1-208ENST00000414711 TCRBV7S2A1N4TA0A589 114 aa14.28□□□□□ -0.12
CPNE1-208ENST00000414711 CYR61O00622 381 aa14.28□□□□□ -0.12
CPNE1-208ENST00000414711 B3GALT2O43825 422 aa14.28□□□□□ -0.12
CPNE1-208ENST00000414711 SNX4O95219 450 aa14.28□□□□□ -0.12
CPNE1-208ENST00000414711 THBDP07204 575 aa14.28□□□□□ -0.12
CPNE1-208ENST00000414711 THBS1P07996 1170 aa14.28□□□□□ -0.12
CPNE1-208ENST00000414711 IGFBP5P24593 272 aa14.28□□□□□ -0.12
CPNE1-208ENST00000414711 STXBP1P61764 594 aaKnown RBP14.28□□□□□ -0.12
CPNE1-208ENST00000414711 CTBP1Q13363 440 aa14.28□□□□□ -0.12
CPNE1-208ENST00000414711 YRDCQ86U90 279 aaKnown RBP14.28□□□□□ -0.12
CPNE1-208ENST00000414711 CPNE9Q8IYJ1 553 aa14.28□□□□□ -0.12
CPNE1-208ENST00000414711 FAM83FQ8NEG4 500 aaPredicted RBP14.28□□□□□ -0.12
CPNE1-208ENST00000414711 PYCR2Q96C36 320 aa14.28□□□□□ -0.12
CPNE1-208ENST00000414711 PLPPR2Q96GM1 343 aa14.28□□□□□ -0.12
CPNE1-208ENST00000414711 HS6ST2Q96MM7 605 aa14.28□□□□□ -0.12
CPNE1-208ENST00000414711 OR4K3Q96R72 315 aa14.28□□□□□ -0.12
CPNE1-208ENST00000414711 GAL3ST4Q96RP7 486 aa14.28□□□□□ -0.12
CPNE1-208ENST00000414711 RHNO1Q9BSD3 238 aa14.28□□□□□ -0.12
CPNE1-208ENST00000414711 FETUBQ9UGM5 382 aa14.28□□□□□ -0.12
CPNE1-208ENST00000414711 LIPT1Q9Y234 373 aa14.28□□□□□ -0.12
CPNE1-208ENST00000414711 MED16Q9Y2X0 877 aa14.28□□□□□ -0.12
CPNE1-208ENST00000414711 FRG2CA6NGY1 282 aa14.27□□□□□ -0.13
CPNE1-208ENST00000414711 EIF3FO00303 357 aaPredicted RBP14.27□□□□□ -0.13
CPNE1-208ENST00000414711 LMX1BO60663 402 aa14.27□□□□□ -0.13
CPNE1-208ENST00000414711 NDUFS7O75251 213 aa14.27□□□□□ -0.13
CPNE1-208ENST00000414711 TGM6O95932 706 aa14.27□□□□□ -0.13
CPNE1-208ENST00000414711 CRHP06850 196 aa14.27□□□□□ -0.13
CPNE1-208ENST00000414711 OGNP20774 298 aaKnown RBP14.27□□□□□ -0.13
CPNE1-208ENST00000414711 SESN2P58004 480 aaPredicted RBP14.27□□□□□ -0.13
CPNE1-208ENST00000414711 SERTAD2Q14140 314 aa14.27□□□□□ -0.13
CPNE1-208ENST00000414711 CSHL1Q14406 222 aa14.27□□□□□ -0.13
CPNE1-208ENST00000414711 EFTUD2Q15029 972 aaKnown RBP eCLIP14.27□□□□□ -0.132e-7■■■■■ 29.2
CPNE1-208ENST00000414711 RPS6KA2Q15349 733 aa14.27□□□□□ -0.13
CPNE1-208ENST00000414711 CCNG2Q16589 344 aa14.27□□□□□ -0.13
CPNE1-208ENST00000414711 FAM174BQ3ZCQ3 159 aa14.27□□□□□ -0.13
CPNE1-208ENST00000414711 ENPP6Q6UWR7 440 aa14.27□□□□□ -0.13
CPNE1-208ENST00000414711 GPATCH11Q8N954 259 aa14.27□□□□□ -0.13
CPNE1-208ENST00000414711 MNS1Q8NEH6 495 aa14.27□□□□□ -0.13
CPNE1-208ENST00000414711 SLC5A11Q8WWX8 675 aa14.27□□□□□ -0.13
CPNE1-208ENST00000414711 KCNJ9Q92806 393 aa14.27□□□□□ -0.13
CPNE1-208ENST00000414711 NEIL2Q969S2 332 aa14.27□□□□□ -0.13
CPNE1-208ENST00000414711 BARX1Q9HBU1 254 aaPredicted RBP14.27□□□□□ -0.13
CPNE1-208ENST00000414711 MAGED1Q9Y5V3 778 aaPredicted RBP14.27□□□□□ -0.13
CPNE1-208ENST00000414711 A0A088AWK7 358 aa14.26□□□□□ -0.13
CPNE1-208ENST00000414711 CCDC188H7C350 402 aa14.26□□□□□ -0.13
CPNE1-208ENST00000414711 TP53I11O14683 189 aa14.26□□□□□ -0.13
CPNE1-208ENST00000414711 ERI3O43414 337 aaKnown RBP14.26□□□□□ -0.13
CPNE1-208ENST00000414711 LDB3O75112 727 aa14.26□□□□□ -0.13
CPNE1-208ENST00000414711 IGKV3-11P04433 115 aa14.26□□□□□ -0.13
CPNE1-208ENST00000414711 COX7A2P14406 83 aa14.26□□□□□ -0.13
CPNE1-208ENST00000414711 ZNF10P21506 573 aaPredicted RBP14.26□□□□□ -0.13
CPNE1-208ENST00000414711 FDFT1P37268 417 aa14.26□□□□□ -0.13
CPNE1-208ENST00000414711 SLC6A12P48065 614 aa14.26□□□□□ -0.13
CPNE1-208ENST00000414711 LIM2P55344 173 aa14.26□□□□□ -0.13
CPNE1-208ENST00000414711 RCN2Q14257 317 aa14.26□□□□□ -0.13
CPNE1-208ENST00000414711 CYB5R2Q6BCY4 276 aa14.26□□□□□ -0.13
CPNE1-208ENST00000414711 CENPUQ71F23 418 aa14.26□□□□□ -0.13
CPNE1-208ENST00000414711 CILP2Q8IUL8 1156 aa14.26□□□□□ -0.13
CPNE1-208ENST00000414711 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP14.26□□□□□ -0.13
CPNE1-208ENST00000414711 CD200R1Q8TD46 325 aa14.26□□□□□ -0.13
CPNE1-208ENST00000414711 FBXW5Q969U6 566 aa14.26□□□□□ -0.13
CPNE1-208ENST00000414711 MFSD3Q96ES6 412 aa14.26□□□□□ -0.13
CPNE1-208ENST00000414711 SENP5Q96HI0 755 aaPredicted RBP14.26□□□□□ -0.13
CPNE1-208ENST00000414711 TSNARE1Q96NA8 513 aa14.26□□□□□ -0.13
CPNE1-208ENST00000414711 KLHL4Q9C0H6 718 aa14.26□□□□□ -0.13
CPNE1-208ENST00000414711 TEX10Q9NXF1 929 aaPredicted RBP14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms