RNA–Protein interactions for RNA: ENST00000413642.7

VEGFA-207, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 1,197 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-207ENST00000413642 MLYCDO95822 493 aa24.34■■□□□ 1.49
VEGFA-207ENST00000413642 KRT6AP02538 564 aa24.34■■□□□ 1.49
VEGFA-207ENST00000413642 KRT6BP04259 564 aa24.34■■□□□ 1.49
VEGFA-207ENST00000413642 CT62P0C5K7 136 aa24.34■■□□□ 1.49
VEGFA-207ENST00000413642 MYL2P10916 166 aa24.34■■□□□ 1.49
VEGFA-207ENST00000413642 PIK3R1P27986 724 aa24.34■■□□□ 1.49
VEGFA-207ENST00000413642 HMOX2P30519 316 aa24.34■■□□□ 1.49
VEGFA-207ENST00000413642 SSTR4P31391 388 aa24.34■■□□□ 1.49
VEGFA-207ENST00000413642 KRT6CP48668 564 aa24.34■■□□□ 1.49
VEGFA-207ENST00000413642 LCP2Q13094 533 aa24.34■■□□□ 1.49
VEGFA-207ENST00000413642 SPPL2CQ8IUH8 684 aa24.34■■□□□ 1.49
VEGFA-207ENST00000413642 ZFP62Q8NB50 900 aaPredicted RBP24.34■■□□□ 1.49
VEGFA-207ENST00000413642 OR4K14Q8NGD5 310 aa24.34■■□□□ 1.49
VEGFA-207ENST00000413642 NUBPLQ8TB37 319 aa24.34■■□□□ 1.49
VEGFA-207ENST00000413642 ART5Q96L15 291 aa24.34■■□□□ 1.49
VEGFA-207ENST00000413642 GAL3ST4Q96RP7 486 aa24.34■■□□□ 1.49
VEGFA-207ENST00000413642 ZNF835Q9Y2P0 537 aa24.34■■□□□ 1.49
VEGFA-207ENST00000413642 PCDHA9Q9Y5H5 950 aa24.34■■□□□ 1.49
VEGFA-207ENST00000413642 ZGRF1Q86YA3 2104 aa24.34■■□□□ 1.49
VEGFA-207ENST00000413642 CROCCQ5TZA2 2017 aa24.34■■□□□ 1.49
VEGFA-207ENST00000413642 PLIN3O60664 434 aa24.33■■□□□ 1.49
VEGFA-207ENST00000413642 XKP51811 444 aa24.33■■□□□ 1.49
VEGFA-207ENST00000413642 FOXA1P55317 472 aa24.33■■□□□ 1.49
VEGFA-207ENST00000413642 SLC37A1P57057 533 aa24.33■■□□□ 1.49
VEGFA-207ENST00000413642 HMGCS1Q01581 520 aa24.33■■□□□ 1.49
VEGFA-207ENST00000413642 MPEG1Q2M385 716 aa24.33■■□□□ 1.49
VEGFA-207ENST00000413642 LYPD8Q6UX82 237 aa24.33■■□□□ 1.49
VEGFA-207ENST00000413642 RNF111Q6ZNA4 994 aa24.33■■□□□ 1.49
VEGFA-207ENST00000413642 RTL4Q6ZR62 310 aa24.33■■□□□ 1.49
VEGFA-207ENST00000413642 C4orf33Q8N1A6 199 aa24.33■■□□□ 1.49
VEGFA-207ENST00000413642 POGLUT1Q8NBL1 392 aa24.33■■□□□ 1.49
VEGFA-207ENST00000413642 CHTF18Q8WVB6 975 aa24.33■■□□□ 1.49
VEGFA-207ENST00000413642 CCDC120Q96HB5 630 aa24.33■■□□□ 1.49
VEGFA-207ENST00000413642 MAGED4Q96JG8 741 aa24.33■■□□□ 1.49
VEGFA-207ENST00000413642 ACPTQ9BZG2 426 aa24.33■■□□□ 1.49
VEGFA-207ENST00000413642 CXorf21Q9HAI6 301 aa24.33■■□□□ 1.49
VEGFA-207ENST00000413642 VPS29Q9UBQ0 182 aa24.33■■□□□ 1.49
VEGFA-207ENST00000413642 CES1P1Q9UKY3 287 aa24.33■■□□□ 1.49
VEGFA-207ENST00000413642 TLDC2A0PJX2 215 aa24.32■■□□□ 1.48
VEGFA-207ENST00000413642 TFECO14948 347 aaPredicted RBP24.32■■□□□ 1.48
VEGFA-207ENST00000413642 ULK1O75385 1050 aa24.32■■□□□ 1.48
VEGFA-207ENST00000413642 CCL3P10147 92 aa24.32■■□□□ 1.48
VEGFA-207ENST00000413642 CMPK2Q5EBM0 449 aa24.32■■□□□ 1.48
VEGFA-207ENST00000413642 FAM180BQ6P0A1 224 aa24.32■■□□□ 1.48
VEGFA-207ENST00000413642 OPN5Q6U736 354 aa24.32■■□□□ 1.48
VEGFA-207ENST00000413642 GHDCQ8N2G8 530 aa24.32■■□□□ 1.48
VEGFA-207ENST00000413642 OR2M7Q8NG81 312 aa24.32■■□□□ 1.48
VEGFA-207ENST00000413642 OR52N2Q8NGI0 321 aa24.32■■□□□ 1.48
VEGFA-207ENST00000413642 C16orf52Q8NHV5 167 aa24.32■■□□□ 1.48
VEGFA-207ENST00000413642 AGAP11Q8TF27 550 aa24.32■■□□□ 1.48
VEGFA-207ENST00000413642 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP24.32■■□□□ 1.485e-12■■■■■ 46.3
VEGFA-207ENST00000413642 MID1IP1Q9NPA3 183 aa24.32■■□□□ 1.48
VEGFA-207ENST00000413642 DOPEY1Q5JWR5 2465 aa24.32■■□□□ 1.48
VEGFA-207ENST00000413642 CPMP14384 443 aa24.31■■□□□ 1.48
VEGFA-207ENST00000413642 KRT4P19013 534 aa24.31■■□□□ 1.48
VEGFA-207ENST00000413642 GALNSP34059 522 aa24.31■■□□□ 1.48
VEGFA-207ENST00000413642 CRHR1P34998 444 aa24.31■■□□□ 1.48
VEGFA-207ENST00000413642 NAGLUP54802 743 aa24.31■■□□□ 1.48
VEGFA-207ENST00000413642 PKNOX1P55347 436 aa24.31■■□□□ 1.48
VEGFA-207ENST00000413642 RAE1P78406 368 aaKnown RBP24.31■■□□□ 1.48
VEGFA-207ENST00000413642 DUSP2Q05923 314 aa24.31■■□□□ 1.48
VEGFA-207ENST00000413642 CSTF3Q12996 717 aaKnown RBP24.31■■□□□ 1.48
VEGFA-207ENST00000413642 EBPQ15125 230 aaKnown RBP24.31■■□□□ 1.48
VEGFA-207ENST00000413642 ZNF800Q2TB10 664 aaPredicted RBP eCLIP24.31■■□□□ 1.481e-17■■■□□ 17
VEGFA-207ENST00000413642 ZNF791Q3KP31 576 aaPredicted RBP24.31■■□□□ 1.48
VEGFA-207ENST00000413642 ZNF787Q6DD87 383 aa24.31■■□□□ 1.48
VEGFA-207ENST00000413642 SLC48A1Q6P1K1 146 aa24.31■■□□□ 1.48
VEGFA-207ENST00000413642 TMEM64Q6YI46 380 aa24.31■■□□□ 1.48
VEGFA-207ENST00000413642 NCCRP1Q6ZVX7 275 aaPredicted RBP24.31■■□□□ 1.48
VEGFA-207ENST00000413642 GALNT12Q8IXK2 581 aa24.31■■□□□ 1.48
VEGFA-207ENST00000413642 APIPQ96GX9 242 aa24.31■■□□□ 1.48
VEGFA-207ENST00000413642 WWTR1Q9GZV5 400 aa24.31■■□□□ 1.48
VEGFA-207ENST00000413642 DEFB127Q9H1M4 99 aa24.31■■□□□ 1.48
VEGFA-207ENST00000413642 PPCSQ9HAB8 311 aa24.31■■□□□ 1.48
VEGFA-207ENST00000413642 TNFRSF12AQ9NP84 129 aa24.31■■□□□ 1.48
VEGFA-207ENST00000413642 NMRK1Q9NWW6 199 aa24.31■■□□□ 1.48
VEGFA-207ENST00000413642 NOL12Q9UGY1 213 aaKnown RBP eCLIP24.31■■□□□ 1.482e-10■■□□□ 14.1
VEGFA-207ENST00000413642 GRID1Q9ULK0 1009 aa24.31■■□□□ 1.48
VEGFA-207ENST00000413642 V9GYY5 206 aaPredicted RBP24.31■■□□□ 1.48
VEGFA-207ENST00000413642 FAM166BA8MTA8 275 aa24.3■■□□□ 1.48
VEGFA-207ENST00000413642 COPEO14579 308 aa24.3■■□□□ 1.48
VEGFA-207ENST00000413642 CDC40O60508 579 aaKnown RBP eCLIP24.3■■□□□ 1.482e-13■■□□□ 11.5
VEGFA-207ENST00000413642 ERAL1O75616 437 aaKnown RBP24.3■■□□□ 1.48
VEGFA-207ENST00000413642 PDE9AO76083 593 aa24.3■■□□□ 1.48
VEGFA-207ENST00000413642 ESRRBO95718 433 aa24.3■■□□□ 1.48
VEGFA-207ENST00000413642 HSD3B1P14060 373 aa24.3■■□□□ 1.48
VEGFA-207ENST00000413642 CNR1P21554 472 aa24.3■■□□□ 1.48
VEGFA-207ENST00000413642 NT5EP21589 574 aa24.3■■□□□ 1.48
VEGFA-207ENST00000413642 HSD3B2P26439 372 aa24.3■■□□□ 1.48
VEGFA-207ENST00000413642 FEN1P39748 380 aaKnown RBP24.3■■□□□ 1.48
VEGFA-207ENST00000413642 CCT5P48643 541 aa24.3■■□□□ 1.48
VEGFA-207ENST00000413642 DNASE1L1P49184 302 aa24.3■■□□□ 1.48
VEGFA-207ENST00000413642 Q6ZPB1 254 aaPredicted RBP24.3■■□□□ 1.48
VEGFA-207ENST00000413642 SLC29A4Q7RTT9 530 aa24.3■■□□□ 1.48
VEGFA-207ENST00000413642 SHCBP1LQ9BZQ2 653 aa24.3■■□□□ 1.48
VEGFA-207ENST00000413642 SDAD1Q9NVU7 687 aaKnown RBP eCLIP24.3■■□□□ 1.482e-8■■□□□ 12.7
VEGFA-207ENST00000413642 HEY2Q9UBP5 337 aa24.3■■□□□ 1.48
VEGFA-207ENST00000413642 A0A1B0GTH9 108 aa24.29■■□□□ 1.48
VEGFA-207ENST00000413642 C1orf226A1L170 272 aa24.29■■□□□ 1.48
VEGFA-207ENST00000413642 CDH16O75309 829 aa24.29■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms