RNA–Protein interactions for RNA: ENST00000412844.6

NR1I3-208, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1I3, Length 989 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-208ENST00000412844 TESMINQ9Y4I5 508 aa6.34□□□□□ -1.39
NR1I3-208ENST00000412844 PRRC2AP48634 2157 aaKnown RBP6.33□□□□□ -1.4
NR1I3-208ENST00000412844 TRBV5-4A0A0C4DH59 114 aa6.33□□□□□ -1.4
NR1I3-208ENST00000412844 KRTAP23-1A1A580 65 aa6.33□□□□□ -1.4
NR1I3-208ENST00000412844 E7EVH7 732 aa6.33□□□□□ -1.4
NR1I3-208ENST00000412844 FAM227AF5H4B4 570 aa6.33□□□□□ -1.4
NR1I3-208ENST00000412844 C19orf84I3L1E1 186 aa6.33□□□□□ -1.4
NR1I3-208ENST00000412844 TP73O15350 636 aa6.33□□□□□ -1.4
NR1I3-208ENST00000412844 HCRTR1O43613 425 aa6.33□□□□□ -1.4
NR1I3-208ENST00000412844 ASNA1O43681 348 aa6.33□□□□□ -1.4
NR1I3-208ENST00000412844 B3GALT2O43825 422 aa6.33□□□□□ -1.4
NR1I3-208ENST00000412844 AHCYL1O43865 530 aa6.33□□□□□ -1.4
NR1I3-208ENST00000412844 ALOX12BO75342 701 aa6.33□□□□□ -1.4
NR1I3-208ENST00000412844 VPS26AO75436 327 aa6.33□□□□□ -1.4
NR1I3-208ENST00000412844 ZWINTO95229 277 aa6.33□□□□□ -1.4
NR1I3-208ENST00000412844 TTC4O95801 387 aa6.33□□□□□ -1.4
NR1I3-208ENST00000412844 IFNB1P01574 187 aa6.33□□□□□ -1.4
NR1I3-208ENST00000412844 FESP07332 822 aa6.33□□□□□ -1.4
NR1I3-208ENST00000412844 HEXBP07686 556 aa6.33□□□□□ -1.4
NR1I3-208ENST00000412844 ANXA5P08758 320 aa6.33□□□□□ -1.4
NR1I3-208ENST00000412844 OR56A5P0C7T3 313 aa6.33□□□□□ -1.4
NR1I3-208ENST00000412844 PECAM1P16284 738 aaPredicted RBP6.33□□□□□ -1.4
NR1I3-208ENST00000412844 CD9P21926 228 aa6.33□□□□□ -1.4
NR1I3-208ENST00000412844 FBLP22087 321 aaKnown RBP6.33□□□□□ -1.4
NR1I3-208ENST00000412844 ACADLP28330 430 aa6.33□□□□□ -1.4
NR1I3-208ENST00000412844 ATP5DP30049 168 aa6.33□□□□□ -1.4
NR1I3-208ENST00000412844 PKLRP30613 574 aa6.33□□□□□ -1.4
NR1I3-208ENST00000412844 PHBP35232 272 aa6.33□□□□□ -1.4
NR1I3-208ENST00000412844 PPARGP37231 505 aaPredicted RBP6.33□□□□□ -1.4
NR1I3-208ENST00000412844 NPY2RP49146 381 aa6.33□□□□□ -1.4
NR1I3-208ENST00000412844 CHN2P52757 468 aa6.33□□□□□ -1.4
NR1I3-208ENST00000412844 ITGA8P53708 1063 aa6.33□□□□□ -1.4
NR1I3-208ENST00000412844 CLNS1AP54105 237 aaKnown RBP6.33□□□□□ -1.4
NR1I3-208ENST00000412844 DYNLT1P63172 113 aa6.33□□□□□ -1.4
NR1I3-208ENST00000412844 XIAPP98170 497 aa6.33□□□□□ -1.4
NR1I3-208ENST00000412844 NHLH2Q02577 135 aa6.33□□□□□ -1.4
NR1I3-208ENST00000412844 ZNF33BQ06732 778 aa6.33□□□□□ -1.4
NR1I3-208ENST00000412844 FRG1Q14331 258 aaKnown RBP6.33□□□□□ -1.4
NR1I3-208ENST00000412844 EXT1Q16394 746 aa6.33□□□□□ -1.4
NR1I3-208ENST00000412844 SYTL3Q4VX76 610 aa6.33□□□□□ -1.4
NR1I3-208ENST00000412844 TTMPQ5BVD1 217 aa6.33□□□□□ -1.4
NR1I3-208ENST00000412844 ANKRD20A2Q5SQ80 823 aa6.33□□□□□ -1.4
NR1I3-208ENST00000412844 ANKRD20A1Q5TYW2 823 aa6.33□□□□□ -1.4
NR1I3-208ENST00000412844 ANKRD20A3Q5VUR7 823 aa6.33□□□□□ -1.4
NR1I3-208ENST00000412844 ZDHHC24Q6UX98 284 aa6.33□□□□□ -1.4
NR1I3-208ENST00000412844 UNC5DQ6UXZ4 953 aa6.33□□□□□ -1.4
NR1I3-208ENST00000412844 PACS1Q6VY07 963 aa6.33□□□□□ -1.4
NR1I3-208ENST00000412844 PID1Q7Z2X4 250 aa6.33□□□□□ -1.4
NR1I3-208ENST00000412844 TRIM73Q86UV7 250 aa6.33□□□□□ -1.4
NR1I3-208ENST00000412844 PAQR7Q86WK9 346 aa6.33□□□□□ -1.4
NR1I3-208ENST00000412844 DCUN1D3Q8IWE4 304 aa6.33□□□□□ -1.4
NR1I3-208ENST00000412844 RIBC1Q8N443 379 aaPredicted RBP6.33□□□□□ -1.4
NR1I3-208ENST00000412844 FITM2Q8N6M3 262 aa6.33□□□□□ -1.4
NR1I3-208ENST00000412844 SIRT6Q8N6T7 355 aa6.33□□□□□ -1.4
NR1I3-208ENST00000412844 TEX9Q8N6V9 391 aa6.33□□□□□ -1.4
NR1I3-208ENST00000412844 FAM71DQ8N9W8 422 aa6.33□□□□□ -1.4
NR1I3-208ENST00000412844 IL17RDQ8NFM7 739 aa6.33□□□□□ -1.4
NR1I3-208ENST00000412844 OR5AR1Q8NGP9 310 aa6.33□□□□□ -1.4
NR1I3-208ENST00000412844 OR2L8Q8NGY9 312 aa6.33□□□□□ -1.4
NR1I3-208ENST00000412844 LILRB4Q8NHJ6 448 aa6.33□□□□□ -1.4
NR1I3-208ENST00000412844 PPP1R35Q8TAP8 253 aa6.33□□□□□ -1.4
NR1I3-208ENST00000412844 AGAP11Q8TF27 550 aa6.33□□□□□ -1.4
NR1I3-208ENST00000412844 ZFAND2BQ8WV99 257 aa6.33□□□□□ -1.4
NR1I3-208ENST00000412844 ASZ1Q8WWH4 475 aa6.33□□□□□ -1.4
NR1I3-208ENST00000412844 ATG4AQ8WYN0 398 aa6.33□□□□□ -1.4
NR1I3-208ENST00000412844 ITFG2Q969R8 447 aa6.33□□□□□ -1.4
NR1I3-208ENST00000412844 ZBTB9Q96C00 473 aa6.33□□□□□ -1.4
NR1I3-208ENST00000412844 SDCCAG3Q96C92 435 aa6.33□□□□□ -1.4
NR1I3-208ENST00000412844 CCT8L2Q96SF2 557 aa6.33□□□□□ -1.4
NR1I3-208ENST00000412844 UTP23Q9BRU9 249 aaKnown RBP6.33□□□□□ -1.4
NR1I3-208ENST00000412844 C1QTNF3Q9BXJ4 246 aa6.33□□□□□ -1.4
NR1I3-208ENST00000412844 GSTO2Q9H4Y5 243 aa6.33□□□□□ -1.4
NR1I3-208ENST00000412844 CCDC134Q9H6E4 229 aa6.33□□□□□ -1.4
NR1I3-208ENST00000412844 KCNJ16Q9NPI9 418 aa6.33□□□□□ -1.4
NR1I3-208ENST00000412844 PNPOQ9NVS9 261 aa6.33□□□□□ -1.4
NR1I3-208ENST00000412844 PARPBPQ9NWS1 579 aa6.33□□□□□ -1.4
NR1I3-208ENST00000412844 SPHK1Q9NYA1 384 aa6.33□□□□□ -1.4
NR1I3-208ENST00000412844 CORO1CQ9ULV4 474 aaPredicted RBP6.33□□□□□ -1.4
NR1I3-208ENST00000412844 TDRKHQ9Y2W6 561 aaKnown RBP6.33□□□□□ -1.4
NR1I3-208ENST00000412844 TSC22D4Q9Y3Q8 395 aa6.33□□□□□ -1.4
NR1I3-208ENST00000412844 ARL5AQ9Y689 179 aa6.33□□□□□ -1.4
NR1I3-208ENST00000412844 JMJD1CQ15652 2540 aa6.33□□□□□ -1.4
NR1I3-208ENST00000412844 SNRNP200O75643 2136 aaKnown RBP6.32□□□□□ -1.4
NR1I3-208ENST00000412844 DIRC3C9JPN6 131 aa6.32□□□□□ -1.4
NR1I3-208ENST00000412844 PDLIM1O00151 329 aa6.32□□□□□ -1.4
NR1I3-208ENST00000412844 F2RL2O00254 374 aa6.32□□□□□ -1.4
NR1I3-208ENST00000412844 SCAF4O95104 1147 aaKnown RBP6.32□□□□□ -1.4
NR1I3-208ENST00000412844 HOXD4P09016 255 aaPredicted RBP6.32□□□□□ -1.4
NR1I3-208ENST00000412844 PKMP14618 531 aaKnown RBP6.32□□□□□ -1.4
NR1I3-208ENST00000412844 ZNF24P17028 368 aa6.32□□□□□ -1.4
NR1I3-208ENST00000412844 PDHA2P29803 388 aa6.32□□□□□ -1.4
NR1I3-208ENST00000412844 APOBEC3AP31941 199 aaPredicted RBP6.32□□□□□ -1.4
NR1I3-208ENST00000412844 OR1D4P47884 311 aa6.32□□□□□ -1.4
NR1I3-208ENST00000412844 PIK3CGP48736 1102 aa6.32□□□□□ -1.4
NR1I3-208ENST00000412844 AGTR2P50052 363 aa6.32□□□□□ -1.4
NR1I3-208ENST00000412844 ZNF140P52738 457 aaPredicted RBP6.32□□□□□ -1.4
NR1I3-208ENST00000412844 IST1P53990 364 aa6.32□□□□□ -1.4
NR1I3-208ENST00000412844 RELAQ04206 551 aa6.32□□□□□ -1.4
NR1I3-208ENST00000412844 WASHC5Q12768 1159 aa6.32□□□□□ -1.4
NR1I3-208ENST00000412844 MEP1AQ16819 746 aa6.32□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms