RNA–Protein interactions for RNA: ENST00000412393.5

LINC00342-201, long intergenic non-protein coding RNA 342, humanhuman

TSL 3 BASIC

Gene LINC00342, Length 654 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00342-201ENST00000412393 INAQ16352 499 aa5.03□□□□□ -1.6
LINC00342-201ENST00000412393 NDUFA5Q16718 116 aa5.03□□□□□ -1.6
LINC00342-201ENST00000412393 SYTL3Q4VX76 610 aa5.03□□□□□ -1.6
LINC00342-201ENST00000412393 NHSL2Q5HYW2 709 aa5.03□□□□□ -1.6
LINC00342-201ENST00000412393 AARS2Q5JTZ9 985 aaKnown RBP5.03□□□□□ -1.6
LINC00342-201ENST00000412393 DEPDC1Q5TB30 811 aa5.03□□□□□ -1.6
LINC00342-201ENST00000412393 ATP1A1-AS1Q5TC04 95 aa5.03□□□□□ -1.6
LINC00342-201ENST00000412393 MFSD4BQ5TF39 518 aa5.03□□□□□ -1.6
LINC00342-201ENST00000412393 NEPROQ6NW34 567 aa5.03□□□□□ -1.6
LINC00342-201ENST00000412393 FAM199XQ6PEV8 388 aaPredicted RBP5.03□□□□□ -1.6
LINC00342-201ENST00000412393 NAPRTQ6XQN6 538 aa5.03□□□□□ -1.6
LINC00342-201ENST00000412393 DCDC5Q6ZRR9 648 aa5.03□□□□□ -1.6
LINC00342-201ENST00000412393 FRMD7Q6ZUT3 714 aa5.03□□□□□ -1.6
LINC00342-201ENST00000412393 FKBP9P1Q75LS8 142 aa5.03□□□□□ -1.6
LINC00342-201ENST00000412393 ZNF534Q76KX8 674 aa5.03□□□□□ -1.6
LINC00342-201ENST00000412393 MAVSQ7Z434 540 aa5.03□□□□□ -1.6
LINC00342-201ENST00000412393 MRGPREQ86SM8 312 aa5.03□□□□□ -1.6
LINC00342-201ENST00000412393 LDB1Q86U70 411 aaPredicted RBP5.03□□□□□ -1.6
LINC00342-201ENST00000412393 PTRH1Q86Y79 214 aaKnown RBP5.03□□□□□ -1.6
LINC00342-201ENST00000412393 SLC15A3Q8IY34 581 aa5.03□□□□□ -1.6
LINC00342-201ENST00000412393 TBC1D21Q8IYX1 336 aa5.03□□□□□ -1.6
LINC00342-201ENST00000412393 ADGRF3Q8IZF5 1079 aa5.03□□□□□ -1.6
LINC00342-201ENST00000412393 DEFB107AQ8IZN7 70 aa5.03□□□□□ -1.6
LINC00342-201ENST00000412393 ANKFN1Q8N957 763 aa5.03□□□□□ -1.6
LINC00342-201ENST00000412393 TNIP2Q8NFZ5 429 aa5.03□□□□□ -1.6
LINC00342-201ENST00000412393 OR5AR1Q8NGP9 310 aa5.03□□□□□ -1.6
LINC00342-201ENST00000412393 C9orf43Q8TAL5 461 aaPredicted RBP5.03□□□□□ -1.6
LINC00342-201ENST00000412393 GSDMBQ8TAX9 411 aa5.03□□□□□ -1.6
LINC00342-201ENST00000412393 PPP4R1Q8TF05 950 aa5.03□□□□□ -1.6
LINC00342-201ENST00000412393 CHAC2Q8WUX2 184 aa5.03□□□□□ -1.6
LINC00342-201ENST00000412393 APOBEC4Q8WW27 367 aaKnown RBP5.03□□□□□ -1.6
LINC00342-201ENST00000412393 SREK1Q8WXA9 508 aaKnown RBP5.03□□□□□ -1.6
LINC00342-201ENST00000412393 TFAP2CQ92754 450 aa5.03□□□□□ -1.6
LINC00342-201ENST00000412393 PEX13Q92968 403 aa5.03□□□□□ -1.6
LINC00342-201ENST00000412393 MR1Q95460 341 aa5.03□□□□□ -1.6
LINC00342-201ENST00000412393 ZUFSPQ96AP4 578 aa5.03□□□□□ -1.6
LINC00342-201ENST00000412393 ZNF501Q96CX3 271 aaPredicted RBP5.03□□□□□ -1.6
LINC00342-201ENST00000412393 NRTNQ99748 197 aa5.03□□□□□ -1.6
LINC00342-201ENST00000412393 BCL7BQ9BQE9 202 aa5.03□□□□□ -1.6
LINC00342-201ENST00000412393 MRPL1Q9BYD6 325 aaKnown RBP5.03□□□□□ -1.6
LINC00342-201ENST00000412393 IL22Q9GZX6 179 aa5.03□□□□□ -1.6
LINC00342-201ENST00000412393 SLC25A18Q9H1K4 315 aa5.03□□□□□ -1.6
LINC00342-201ENST00000412393 CCDC68Q9H2F9 335 aa5.03□□□□□ -1.6
LINC00342-201ENST00000412393 XKR8Q9H6D3 395 aa5.03□□□□□ -1.6
LINC00342-201ENST00000412393 AKIRIN1Q9H9L7 192 aaPredicted RBP5.03□□□□□ -1.6
LINC00342-201ENST00000412393 EFCAB1Q9HAE3 211 aa5.03□□□□□ -1.6
LINC00342-201ENST00000412393 FANCEQ9HB96 536 aa5.03□□□□□ -1.6
LINC00342-201ENST00000412393 SYTL2Q9HCH5 934 aa5.03□□□□□ -1.6
LINC00342-201ENST00000412393 EIF2B3Q9NR50 452 aaKnown RBP5.03□□□□□ -1.6
LINC00342-201ENST00000412393 CATSPERZQ9NTU4 200 aa5.03□□□□□ -1.6
LINC00342-201ENST00000412393 TBC1D23Q9NUY8 699 aa5.03□□□□□ -1.6
LINC00342-201ENST00000412393 ACTR10Q9NZ32 417 aa5.03□□□□□ -1.6
LINC00342-201ENST00000412393 BFARQ9NZS9 450 aa5.03□□□□□ -1.6
LINC00342-201ENST00000412393 POLG2Q9UHN1 485 aa5.03□□□□□ -1.6
LINC00342-201ENST00000412393 TUBD1Q9UJT1 453 aa5.03□□□□□ -1.6
LINC00342-201ENST00000412393 EMCNQ9ULC0 261 aa5.03□□□□□ -1.6
LINC00342-201ENST00000412393 G3BP2Q9UN86 482 aaKnown RBP5.03□□□□□ -1.6
LINC00342-201ENST00000412393 ICKQ9UPZ9 632 aa5.03□□□□□ -1.6
LINC00342-201ENST00000412393 TDRKHQ9Y2W6 561 aaKnown RBP5.03□□□□□ -1.6
LINC00342-201ENST00000412393 DOCK10Q96BY6 2186 aa5.03□□□□□ -1.6
LINC00342-201ENST00000412393 TLN1Q9Y490 2541 aaKnown RBP5.03□□□□□ -1.6
LINC00342-201ENST00000412393 GCN1Q92616 2671 aaKnown RBP5.02□□□□□ -1.61
LINC00342-201ENST00000412393 HELZ2Q9BYK8 2649 aaKnown RBP5.02□□□□□ -1.61
LINC00342-201ENST00000412393 TCRBV3S1A0A5B6 114 aa5.02□□□□□ -1.61
LINC00342-201ENST00000412393 FUOMA2VDF0 154 aa5.02□□□□□ -1.61
LINC00342-201ENST00000412393 ZAR1LA6NP61 321 aa5.02□□□□□ -1.61
LINC00342-201ENST00000412393 IQCF5A8MTL0 148 aa5.02□□□□□ -1.61
LINC00342-201ENST00000412393 C21orf140B9A014 251 aa5.02□□□□□ -1.61
LINC00342-201ENST00000412393 TMEM150CB9EJG8 249 aa5.02□□□□□ -1.61
LINC00342-201ENST00000412393 PYCARD-AS1I3L0S3 204 aa5.02□□□□□ -1.61
LINC00342-201ENST00000412393 GOLGA8RI6L899 631 aa5.02□□□□□ -1.61
LINC00342-201ENST00000412393 PRMT5O14744 637 aaPredicted RBP5.02□□□□□ -1.61
LINC00342-201ENST00000412393 CD3EAPO15446 510 aaKnown RBP5.02□□□□□ -1.61
LINC00342-201ENST00000412393 KDM1AO60341 852 aa5.02□□□□□ -1.61
LINC00342-201ENST00000412393 NDUFS3O75489 264 aa5.02□□□□□ -1.61
LINC00342-201ENST00000412393 KLK3P07288 261 aaPredicted RBP5.02□□□□□ -1.61
LINC00342-201ENST00000412393 CHRM5P08912 532 aaPredicted RBP5.02□□□□□ -1.61
LINC00342-201ENST00000412393 HBQ1P09105 142 aa5.02□□□□□ -1.61
LINC00342-201ENST00000412393 COL6A2P12110 1019 aa5.02□□□□□ -1.61
LINC00342-201ENST00000412393 UGT2B7P16662 529 aa5.02□□□□□ -1.61
LINC00342-201ENST00000412393 CYP2A7P20853 494 aa5.02□□□□□ -1.61
LINC00342-201ENST00000412393 MYF6P23409 242 aa5.02□□□□□ -1.61
LINC00342-201ENST00000412393 MGAT1P26572 445 aa5.02□□□□□ -1.61
LINC00342-201ENST00000412393 NMBRP28336 390 aa5.02□□□□□ -1.61
LINC00342-201ENST00000412393 CCR7P32248 378 aa5.02□□□□□ -1.61
LINC00342-201ENST00000412393 SERPINB5P36952 375 aa5.02□□□□□ -1.61
LINC00342-201ENST00000412393 CPA2P48052 419 aa5.02□□□□□ -1.61
LINC00342-201ENST00000412393 TTPAP49638 278 aa5.02□□□□□ -1.61
LINC00342-201ENST00000412393 BCAP31P51572 246 aa5.02□□□□□ -1.61
LINC00342-201ENST00000412393 ALDH18A1P54886 795 aaKnown RBP5.02□□□□□ -1.61
LINC00342-201ENST00000412393 ARPC4P59998 168 aa5.02□□□□□ -1.61
LINC00342-201ENST00000412393 RPS3AP61247 264 aaKnown RBP5.02□□□□□ -1.61
LINC00342-201ENST00000412393 ATP6V0D1P61421 351 aa5.02□□□□□ -1.61
LINC00342-201ENST00000412393 CRADDP78560 199 aa5.02□□□□□ -1.61
LINC00342-201ENST00000412393 MPP1Q00013 466 aa5.02□□□□□ -1.61
LINC00342-201ENST00000412393 HSPA14Q0VDF9 509 aa5.02□□□□□ -1.61
LINC00342-201ENST00000412393 ABRQ12979 859 aa5.02□□□□□ -1.61
LINC00342-201ENST00000412393 TRIM25Q14258 630 aaKnown RBP5.02□□□□□ -1.61
LINC00342-201ENST00000412393 EFTUD2Q15029 972 aaKnown RBP eCLIP5.02□□□□□ -1.61
LINC00342-201ENST00000412393 GRAMD1BQ3KR37 738 aa5.02□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms