RNA–Protein interactions for RNA: ENST00000411884.2

CLHC1-205, Transcript of clathrin heavy chain linker domain containing 1, humanhuman

TSL 4

Gene CLHC1, Length 549 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLHC1-205ENST00000411884 RPA4Q13156 261 aa3.09□□□□□ -1.91
CLHC1-205ENST00000411884 VWA2Q5GFL6 755 aa3.09□□□□□ -1.91
CLHC1-205ENST00000411884 NHLRC3Q5JS37 347 aa3.09□□□□□ -1.91
CLHC1-205ENST00000411884 ARMCX5Q6P1M9 558 aa3.09□□□□□ -1.91
CLHC1-205ENST00000411884 SNX32Q86XE0 403 aa3.09□□□□□ -1.91
CLHC1-205ENST00000411884 MARCH9Q86YJ5 346 aa3.09□□□□□ -1.91
CLHC1-205ENST00000411884 HPS6Q86YV9 775 aa3.09□□□□□ -1.91
CLHC1-205ENST00000411884 CARNMT1Q8N4J0 409 aa3.09□□□□□ -1.91
CLHC1-205ENST00000411884 ZNF713Q8N859 430 aaPredicted RBP3.09□□□□□ -1.91
CLHC1-205ENST00000411884 ZNF491Q8N8L2 437 aa3.09□□□□□ -1.91
CLHC1-205ENST00000411884 SUMF1Q8NBK3 374 aa3.09□□□□□ -1.91
CLHC1-205ENST00000411884 C16orf58Q96GQ5 468 aa3.09□□□□□ -1.91
CLHC1-205ENST00000411884 GPR137Q96N19 417 aa3.09□□□□□ -1.91
CLHC1-205ENST00000411884 FAM213AQ9BRX8 229 aa3.09□□□□□ -1.91
CLHC1-205ENST00000411884 FUNDC2Q9BWH2 189 aa3.09□□□□□ -1.91
CLHC1-205ENST00000411884 TMEM245Q9H330 911 aa3.09□□□□□ -1.91
CLHC1-205ENST00000411884 KCNMB3Q9NPA1 279 aa3.09□□□□□ -1.91
CLHC1-205ENST00000411884 COMMD8Q9NX08 183 aa3.09□□□□□ -1.91
CLHC1-205ENST00000411884 TEX264Q9Y6I9 313 aa3.09□□□□□ -1.91
CLHC1-205ENST00000411884 KIF7Q2M1P5 1343 aa3.09□□□□□ -1.91
CLHC1-205ENST00000411884 RNF212BA8MTL3 300 aa3.08□□□□□ -1.92
CLHC1-205ENST00000411884 TLR4O00206 839 aa3.08□□□□□ -1.92
CLHC1-205ENST00000411884 E2F3O00716 465 aa3.08□□□□□ -1.92
CLHC1-205ENST00000411884 REC8O95072 547 aa3.08□□□□□ -1.92
CLHC1-205ENST00000411884 CXCL14O95715 111 aa3.08□□□□□ -1.92
CLHC1-205ENST00000411884 PDGFBP01127 241 aaPredicted RBP3.08□□□□□ -1.92
CLHC1-205ENST00000411884 SFTPBP07988 381 aa3.08□□□□□ -1.92
CLHC1-205ENST00000411884 GP9P14770 177 aa3.08□□□□□ -1.92
CLHC1-205ENST00000411884 ATP6V1B1P15313 513 aa3.08□□□□□ -1.92
CLHC1-205ENST00000411884 ELK3P41970 407 aa3.08□□□□□ -1.92
CLHC1-205ENST00000411884 ALDH3B1P43353 468 aa3.08□□□□□ -1.92
CLHC1-205ENST00000411884 GEMP55040 296 aa3.08□□□□□ -1.92
CLHC1-205ENST00000411884 KRT31Q15323 416 aa3.08□□□□□ -1.92
CLHC1-205ENST00000411884 C17orf58Q2M2W7 97 aa3.08□□□□□ -1.92
CLHC1-205ENST00000411884 C2orf76Q3KRA6 126 aa3.08□□□□□ -1.92
CLHC1-205ENST00000411884 UNC50Q53HI1 259 aa3.08□□□□□ -1.92
CLHC1-205ENST00000411884 SLC25A30Q5SVS4 291 aa3.08□□□□□ -1.92
CLHC1-205ENST00000411884 REP15Q6BDI9 236 aa3.08□□□□□ -1.92
CLHC1-205ENST00000411884 RHBDD2Q6NTF9 364 aa3.08□□□□□ -1.92
CLHC1-205ENST00000411884 HIPK1Q86Z02 1210 aa3.08□□□□□ -1.92
CLHC1-205ENST00000411884 ICA1LQ8NDH6 482 aa3.08□□□□□ -1.92
CLHC1-205ENST00000411884 PSMA8Q8TAA3 256 aa3.08□□□□□ -1.92
CLHC1-205ENST00000411884 SLCO4A1Q96BD0 722 aa3.08□□□□□ -1.92
CLHC1-205ENST00000411884 RAB39BQ96DA2 213 aa3.08□□□□□ -1.92
CLHC1-205ENST00000411884 PIGVQ9NUD9 493 aa3.08□□□□□ -1.92
CLHC1-205ENST00000411884 CYP39A1Q9NYL5 469 aa3.08□□□□□ -1.92
CLHC1-205ENST00000411884 MTRRQ9UBK8 725 aa3.08□□□□□ -1.92
CLHC1-205ENST00000411884 MRPS2Q9Y399 296 aaKnown RBP3.08□□□□□ -1.92
CLHC1-205ENST00000411884 VEGFDO43915 354 aa3.07□□□□□ -1.92
CLHC1-205ENST00000411884 OLFM2O95897 454 aa3.07□□□□□ -1.92
CLHC1-205ENST00000411884 PNPP00491 289 aa3.07□□□□□ -1.92
CLHC1-205ENST00000411884 FCER2P06734 321 aa3.07□□□□□ -1.92
CLHC1-205ENST00000411884 SERPINF2P08697 491 aa3.07□□□□□ -1.92
CLHC1-205ENST00000411884 FAM200BP0CF97 657 aa3.07□□□□□ -1.92
CLHC1-205ENST00000411884 FERP16591 822 aa3.07□□□□□ -1.92
CLHC1-205ENST00000411884 SLC12A3P55017 1021 aa3.07□□□□□ -1.92
CLHC1-205ENST00000411884 EMC2Q15006 297 aa3.07□□□□□ -1.92
CLHC1-205ENST00000411884 EXOSC7Q15024 291 aaKnown RBP3.07□□□□□ -1.92
CLHC1-205ENST00000411884 ANKRD55Q3KP44 614 aa3.07□□□□□ -1.92
CLHC1-205ENST00000411884 NKAIN2Q5VXU1 208 aa3.07□□□□□ -1.92
CLHC1-205ENST00000411884 SEL1L3Q68CR1 1132 aa3.07□□□□□ -1.92
CLHC1-205ENST00000411884 RTL6Q6ICC9 239 aa3.07□□□□□ -1.92
CLHC1-205ENST00000411884 STEAP1BQ6NZ63 245 aa3.07□□□□□ -1.92
CLHC1-205ENST00000411884 Q6ZR54 194 aa3.07□□□□□ -1.92
CLHC1-205ENST00000411884 GPR142Q7Z601 462 aa3.07□□□□□ -1.92
CLHC1-205ENST00000411884 LINC00612Q8N6U2 182 aa3.07□□□□□ -1.92
CLHC1-205ENST00000411884 SPC24Q8NBT2 197 aa3.07□□□□□ -1.92
CLHC1-205ENST00000411884 MSANTD4Q8NCY6 345 aa3.07□□□□□ -1.92
CLHC1-205ENST00000411884 OR6T1Q8NGN1 323 aa3.07□□□□□ -1.92
CLHC1-205ENST00000411884 TYMSOSQ8TAI1 123 aa3.07□□□□□ -1.92
CLHC1-205ENST00000411884 FBXO25Q8TCJ0 367 aa3.07□□□□□ -1.92
CLHC1-205ENST00000411884 P3H4Q92791 437 aa3.07□□□□□ -1.92
CLHC1-205ENST00000411884 DTD2Q96FN9 168 aa3.07□□□□□ -1.92
CLHC1-205ENST00000411884 COG3Q96JB2 828 aa3.07□□□□□ -1.92
CLHC1-205ENST00000411884 RPGRIP1Q96KN7 1286 aa3.07□□□□□ -1.92
CLHC1-205ENST00000411884 CCDC43Q96MW1 224 aaKnown RBP3.07□□□□□ -1.92
CLHC1-205ENST00000411884 ST6GALNAC5Q9BVH7 336 aa3.07□□□□□ -1.92
CLHC1-205ENST00000411884 Q9HAA7 133 aa3.07□□□□□ -1.92
CLHC1-205ENST00000411884 IL1RL2Q9HB29 575 aa3.07□□□□□ -1.92
CLHC1-205ENST00000411884 PRMT8Q9NR22 394 aaPredicted RBP3.07□□□□□ -1.92
CLHC1-205ENST00000411884 CLEC5AQ9NY25 188 aa3.07□□□□□ -1.92
CLHC1-205ENST00000411884 AKAP7Q9P0M2 348 aaPredicted RBP3.07□□□□□ -1.92
CLHC1-205ENST00000411884 DHX29Q7Z478 1369 aaKnown RBP3.07□□□□□ -1.92
CLHC1-205ENST00000411884 E9PAM4 449 aa3.06□□□□□ -1.92
CLHC1-205ENST00000411884 FCGR3AP08637 254 aa3.06□□□□□ -1.92
CLHC1-205ENST00000411884 MBL2P11226 248 aaPredicted RBP3.06□□□□□ -1.92
CLHC1-205ENST00000411884 AREGP15514 252 aa3.06□□□□□ -1.92
CLHC1-205ENST00000411884 TRIM23P36406 574 aa3.06□□□□□ -1.92
CLHC1-205ENST00000411884 MATKP42679 507 aa3.06□□□□□ -1.92
CLHC1-205ENST00000411884 TNFRSF4P43489 277 aa3.06□□□□□ -1.92
CLHC1-205ENST00000411884 NSFP46459 744 aaKnown RBP3.06□□□□□ -1.92
CLHC1-205ENST00000411884 PITPNBP48739 271 aa3.06□□□□□ -1.92
CLHC1-205ENST00000411884 CNN1P51911 297 aaKnown RBP3.06□□□□□ -1.92
CLHC1-205ENST00000411884 RPS4XP62701 263 aaKnown RBP3.06□□□□□ -1.92
CLHC1-205ENST00000411884 ARF5P84085 180 aa3.06□□□□□ -1.92
CLHC1-205ENST00000411884 KLF5Q13887 457 aaPredicted RBP3.06□□□□□ -1.92
CLHC1-205ENST00000411884 TRADDQ15628 312 aa3.06□□□□□ -1.92
CLHC1-205ENST00000411884 KRT71Q3SY84 523 aa3.06□□□□□ -1.92
CLHC1-205ENST00000411884 PRAMEF7Q5VXH5 474 aa3.06□□□□□ -1.92
CLHC1-205ENST00000411884 LIPJQ5W064 366 aa3.06□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms