RNA–Protein interactions for RNA: ENST00000411496.1

TTC3-205, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 3

Gene TTC3, Length 893 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-205ENST00000411496 ETFRF1Q6IPR1 90 aa4.17□□□□□ -1.74
TTC3-205ENST00000411496 TIPARPQ7Z3E1 657 aaKnown RBP4.17□□□□□ -1.74
TTC3-205ENST00000411496 PARP8Q8N3A8 854 aa4.17□□□□□ -1.74
TTC3-205ENST00000411496 RTL3Q8N8U3 475 aaKnown RBP4.17□□□□□ -1.74
TTC3-205ENST00000411496 ZNRF1Q8ND25 227 aa4.17□□□□□ -1.74
TTC3-205ENST00000411496 PNPLA2Q96AD5 504 aa4.17□□□□□ -1.74
TTC3-205ENST00000411496 RAB39BQ96DA2 213 aa4.17□□□□□ -1.74
TTC3-205ENST00000411496 MRPL53Q96EL3 112 aaKnown RBP4.17□□□□□ -1.74
TTC3-205ENST00000411496 ACAT2Q9BWD1 397 aa4.17□□□□□ -1.74
TTC3-205ENST00000411496 FUNDC2Q9BWH2 189 aa4.17□□□□□ -1.74
TTC3-205ENST00000411496 TEX13AQ9BXU3 409 aaPredicted RBP4.17□□□□□ -1.74
TTC3-205ENST00000411496 CXXC4Q9H2H0 198 aa4.17□□□□□ -1.74
TTC3-205ENST00000411496 KCNMB3Q9NPA1 279 aa4.17□□□□□ -1.74
TTC3-205ENST00000411496 ERVK-18Q9QC07 812 aa4.17□□□□□ -1.74
TTC3-205ENST00000411496 KNSTRNQ9Y448 316 aa4.17□□□□□ -1.74
TTC3-205ENST00000411496 DHX29Q7Z478 1369 aaKnown RBP4.16□□□□□ -1.74
TTC3-205ENST00000411496 SH3PXD2BA1X283 911 aa4.16□□□□□ -1.74
TTC3-205ENST00000411496 HSF2BPO75031 334 aa4.16□□□□□ -1.74
TTC3-205ENST00000411496 SH3BGRLO75368 114 aa4.16□□□□□ -1.74
TTC3-205ENST00000411496 HIST1H2AGP0C0S8 130 aaPredicted RBP4.16□□□□□ -1.74
TTC3-205ENST00000411496 P4HA1P13674 534 aa4.16□□□□□ -1.74
TTC3-205ENST00000411496 FOSL2P15408 326 aa4.16□□□□□ -1.74
TTC3-205ENST00000411496 PPP2R1BP30154 601 aa4.16□□□□□ -1.74
TTC3-205ENST00000411496 RPL34P49207 117 aaKnown RBP4.16□□□□□ -1.74
TTC3-205ENST00000411496 CNN1P51911 297 aaKnown RBP4.16□□□□□ -1.74
TTC3-205ENST00000411496 LIMK2P53671 638 aa4.16□□□□□ -1.74
TTC3-205ENST00000411496 SSTP61278 116 aa4.16□□□□□ -1.74
TTC3-205ENST00000411496 HAGHQ16775 308 aa4.16□□□□□ -1.74
TTC3-205ENST00000411496 HFEQ30201 348 aa4.16□□□□□ -1.74
TTC3-205ENST00000411496 EPC2Q52LR7 807 aa4.16□□□□□ -1.74
TTC3-205ENST00000411496 TCTEX1D4Q5JR98 221 aa4.16□□□□□ -1.74
TTC3-205ENST00000411496 ARMCX5Q6P1M9 558 aa4.16□□□□□ -1.74
TTC3-205ENST00000411496 GPR142Q7Z601 462 aa4.16□□□□□ -1.74
TTC3-205ENST00000411496 CDC20BQ86Y33 519 aa4.16□□□□□ -1.74
TTC3-205ENST00000411496 HIST2H2ABQ8IUE6 130 aaPredicted RBP4.16□□□□□ -1.74
TTC3-205ENST00000411496 PEX5LQ8IYB4 626 aa4.16□□□□□ -1.74
TTC3-205ENST00000411496 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP4.16□□□□□ -1.74
TTC3-205ENST00000411496 RDH11Q8TC12 318 aa4.16□□□□□ -1.74
TTC3-205ENST00000411496 HIST1H2ACQ93077 130 aa4.16□□□□□ -1.74
TTC3-205ENST00000411496 ZNF560Q96MR9 790 aa4.16□□□□□ -1.74
TTC3-205ENST00000411496 NAP1L5Q96NT1 182 aaPredicted RBP4.16□□□□□ -1.74
TTC3-205ENST00000411496 C19orf43Q9BQ61 176 aa4.16□□□□□ -1.74
TTC3-205ENST00000411496 ELL3Q9HB65 397 aaPredicted RBP4.16□□□□□ -1.74
TTC3-205ENST00000411496 TUBGCP4Q9UGJ1 667 aa4.16□□□□□ -1.74
TTC3-205ENST00000411496 NARFQ9UHQ1 456 aa4.16□□□□□ -1.74
TTC3-205ENST00000411496 TRMT6Q9UJA5 497 aaKnown RBP4.16□□□□□ -1.74
TTC3-205ENST00000411496 DIMT1Q9UNQ2 313 aaKnown RBP4.16□□□□□ -1.74
TTC3-205ENST00000411496 FBXO7Q9Y3I1 522 aa4.16□□□□□ -1.74
TTC3-205ENST00000411496 ATG4BQ9Y4P1 393 aa4.16□□□□□ -1.74
TTC3-205ENST00000411496 STYXL1Q9Y6J8 313 aa4.16□□□□□ -1.74
TTC3-205ENST00000411496 A0A1B0GTH9 108 aa4.15□□□□□ -1.75
TTC3-205ENST00000411496 TEX48A0A1B0GUV7 120 aa4.15□□□□□ -1.75
TTC3-205ENST00000411496 TRIM49BA6NDI0 452 aa4.15□□□□□ -1.75
TTC3-205ENST00000411496 TRIM64A6NGJ6 449 aa4.15□□□□□ -1.75
TTC3-205ENST00000411496 TRIM64BA6NI03 449 aa4.15□□□□□ -1.75
TTC3-205ENST00000411496 VEGFDO43915 354 aa4.15□□□□□ -1.75
TTC3-205ENST00000411496 DUSP11O75319 330 aaKnown RBP4.15□□□□□ -1.75
TTC3-205ENST00000411496 SEMA4FO95754 770 aa4.15□□□□□ -1.75
TTC3-205ENST00000411496 HPP00738 406 aa4.15□□□□□ -1.75
TTC3-205ENST00000411496 OR9G9P0C7N8 305 aa4.15□□□□□ -1.75
TTC3-205ENST00000411496 FOLR2P14207 255 aa4.15□□□□□ -1.75
TTC3-205ENST00000411496 CALML3P27482 149 aa4.15□□□□□ -1.75
TTC3-205ENST00000411496 ELK3P41970 407 aa4.15□□□□□ -1.75
TTC3-205ENST00000411496 TNFRSF4P43489 277 aa4.15□□□□□ -1.75
TTC3-205ENST00000411496 ACADSBP45954 432 aa4.15□□□□□ -1.75
TTC3-205ENST00000411496 NT5C2P49902 561 aa4.15□□□□□ -1.75
TTC3-205ENST00000411496 NDST1P52848 882 aa4.15□□□□□ -1.75
TTC3-205ENST00000411496 CASP9P55211 416 aa4.15□□□□□ -1.75
TTC3-205ENST00000411496 DSCR10P59022 87 aa4.15□□□□□ -1.75
TTC3-205ENST00000411496 GALK2Q01415 458 aa4.15□□□□□ -1.75
TTC3-205ENST00000411496 GFPT1Q06210 699 aaPredicted RBP4.15□□□□□ -1.75
TTC3-205ENST00000411496 ZFP36L1Q07352 338 aaKnown RBP4.15□□□□□ -1.75
TTC3-205ENST00000411496 PPP1R8Q12972 351 aaKnown RBP4.15□□□□□ -1.75
TTC3-205ENST00000411496 CCL14Q16627 93 aa4.15□□□□□ -1.75
TTC3-205ENST00000411496 TMEM44Q2T9K0 475 aa4.15□□□□□ -1.75
TTC3-205ENST00000411496 DCAF12Q5T6F0 453 aa4.15□□□□□ -1.75
TTC3-205ENST00000411496 CDC42EP5Q6NZY7 148 aa4.15□□□□□ -1.75
TTC3-205ENST00000411496 P2RY8Q86VZ1 359 aa4.15□□□□□ -1.75
TTC3-205ENST00000411496 MARCH9Q86YJ5 346 aa4.15□□□□□ -1.75
TTC3-205ENST00000411496 CCDC71Q8IV32 467 aaPredicted RBP4.15□□□□□ -1.75
TTC3-205ENST00000411496 LINC00518Q8N0U6 118 aa4.15□□□□□ -1.75
TTC3-205ENST00000411496 CHDHQ8NE62 594 aaPredicted RBP4.15□□□□□ -1.75
TTC3-205ENST00000411496 C1orf147Q96MC9 270 aaPredicted RBP4.15□□□□□ -1.75
TTC3-205ENST00000411496 LIME1Q9H400 295 aa4.15□□□□□ -1.75
TTC3-205ENST00000411496 DCTPP1Q9H773 170 aa4.15□□□□□ -1.75
TTC3-205ENST00000411496 Q9HAA7 133 aa4.15□□□□□ -1.75
TTC3-205ENST00000411496 EIF3KQ9UBQ5 218 aaKnown RBP4.15□□□□□ -1.75
TTC3-205ENST00000411496 FER1L5A0AVI2 2057 aa4.15□□□□□ -1.75
TTC3-205ENST00000411496 SPAG9O60271 1321 aaKnown RBP4.15□□□□□ -1.75
TTC3-205ENST00000411496 SLC9B1P1A6NJY1 282 aa4.14□□□□□ -1.75
TTC3-205ENST00000411496 TLR4O00206 839 aa4.14□□□□□ -1.75
TTC3-205ENST00000411496 RENP00797 406 aa4.14□□□□□ -1.75
TTC3-205ENST00000411496 ABHD2P08910 425 aa4.14□□□□□ -1.75
TTC3-205ENST00000411496 CCDC159P0C7I6 412 aa4.14□□□□□ -1.75
TTC3-205ENST00000411496 ZNF131P52739 623 aa4.14□□□□□ -1.75
TTC3-205ENST00000411496 AP1B1Q10567 949 aa4.14□□□□□ -1.75
TTC3-205ENST00000411496 ITPK1Q13572 414 aa4.14□□□□□ -1.75
TTC3-205ENST00000411496 EXOSC7Q15024 291 aaKnown RBP4.14□□□□□ -1.75
TTC3-205ENST00000411496 PCK2Q16822 640 aa4.14□□□□□ -1.75
TTC3-205ENST00000411496 C15orf32Q32M92 178 aa4.14□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms