RNA–Protein interactions for RNA: ENST00000411146.1

RNU2-55P-201, Transcript of RNA, U2 small nuclear 55, pseudogene, humanhuman

BASIC

Gene RNU2-55P, Length 174 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU2-55P-201ENST00000411146 APOBEC3BQ9UH17 382 aaKnown RBP0.71□□□□□ -2.3
RNU2-55P-201ENST00000411146 LEF1Q9UJU2 399 aaPredicted RBP0.71□□□□□ -2.3
RNU2-55P-201ENST00000411146 OR1A2Q9Y585 309 aa0.71□□□□□ -2.3
RNU2-55P-201ENST00000411146 LIPGQ9Y5X9 500 aa0.71□□□□□ -2.3
RNU2-55P-201ENST00000411146 PCM1Q15154 2024 aa0.71□□□□□ -2.3
RNU2-55P-201ENST00000411146 IGKV2-28A0A075B6P5 120 aa0.7□□□□□ -2.3
RNU2-55P-201ENST00000411146 GTPBP10A4D1E9 387 aaKnown RBP0.7□□□□□ -2.3
RNU2-55P-201ENST00000411146 RNF212BA8MTL3 300 aa0.7□□□□□ -2.3
RNU2-55P-201ENST00000411146 SERF1AO75920 110 aa0.7□□□□□ -2.3
RNU2-55P-201ENST00000411146 IGKV2D-28P01615 120 aa0.7□□□□□ -2.3
RNU2-55P-201ENST00000411146 HMGB1P09429 215 aaKnown RBP0.7□□□□□ -2.3
RNU2-55P-201ENST00000411146 WNT2P09544 360 aa0.7□□□□□ -2.3
RNU2-55P-201ENST00000411146 PDGFRAP16234 1089 aa0.7□□□□□ -2.3
RNU2-55P-201ENST00000411146 PTPN4P29074 926 aa0.7□□□□□ -2.3
RNU2-55P-201ENST00000411146 PPP2R1BP30154 601 aa0.7□□□□□ -2.3
RNU2-55P-201ENST00000411146 CAPZA2P47755 286 aa0.7□□□□□ -2.3
RNU2-55P-201ENST00000411146 NT5C2P49902 561 aa0.7□□□□□ -2.3
RNU2-55P-201ENST00000411146 ARHGDIBP52566 201 aa0.7□□□□□ -2.3
RNU2-55P-201ENST00000411146 RPP38P78345 283 aaKnown RBP0.7□□□□□ -2.3
RNU2-55P-201ENST00000411146 CD47Q08722 323 aa0.7□□□□□ -2.3
RNU2-55P-201ENST00000411146 DAZ2Q13117 558 aaKnown RBP0.7□□□□□ -2.3
RNU2-55P-201ENST00000411146 SERTAD2Q14140 314 aa0.7□□□□□ -2.3
RNU2-55P-201ENST00000411146 ZNF273Q14593 569 aa0.7□□□□□ -2.3
RNU2-55P-201ENST00000411146 LY6EQ16553 131 aa0.7□□□□□ -2.3
RNU2-55P-201ENST00000411146 MICAQ29983 383 aa0.7□□□□□ -2.3
RNU2-55P-201ENST00000411146 ZNF528Q3MIS6 628 aa0.7□□□□□ -2.3
RNU2-55P-201ENST00000411146 FAM174BQ3ZCQ3 159 aa0.7□□□□□ -2.3
RNU2-55P-201ENST00000411146 MS4A13Q5J8X5 152 aa0.7□□□□□ -2.3
RNU2-55P-201ENST00000411146 C6orf136Q5SQH8 315 aa0.7□□□□□ -2.3
RNU2-55P-201ENST00000411146 PM20D1Q6GTS8 502 aa0.7□□□□□ -2.3
RNU2-55P-201ENST00000411146 ASPHD2Q6ICH7 369 aa0.7□□□□□ -2.3
RNU2-55P-201ENST00000411146 TATDN1Q6P1N9 297 aa0.7□□□□□ -2.3
RNU2-55P-201ENST00000411146 SIGLEC15Q6ZMC9 328 aa0.7□□□□□ -2.3
RNU2-55P-201ENST00000411146 ITIH5Q86UX2 942 aa0.7□□□□□ -2.3
RNU2-55P-201ENST00000411146 MEX3DQ86XN8 651 aaKnown RBP0.7□□□□□ -2.3
RNU2-55P-201ENST00000411146 H1FOOQ8IZA3 346 aaPredicted RBP0.7□□□□□ -2.3
RNU2-55P-201ENST00000411146 ARIH2OSQ8N7S6 290 aa0.7□□□□□ -2.3
RNU2-55P-201ENST00000411146 KCTD6Q8NC69 237 aa0.7□□□□□ -2.3
RNU2-55P-201ENST00000411146 Q8NFD4 153 aa0.7□□□□□ -2.3
RNU2-55P-201ENST00000411146 MRPS27Q92552 414 aaKnown RBP0.7□□□□□ -2.3
RNU2-55P-201ENST00000411146 RIT1Q92963 219 aa0.7□□□□□ -2.3
RNU2-55P-201ENST00000411146 SGF29Q96ES7 293 aa0.7□□□□□ -2.3
RNU2-55P-201ENST00000411146 AK8Q96MA6 479 aa0.7□□□□□ -2.3
RNU2-55P-201ENST00000411146 RAB40CQ96S21 281 aa0.7□□□□□ -2.3
RNU2-55P-201ENST00000411146 NACAP1Q9BZK3 213 aa0.7□□□□□ -2.3
RNU2-55P-201ENST00000411146 UBA5Q9GZZ9 404 aa0.7□□□□□ -2.3
RNU2-55P-201ENST00000411146 LMAN1LQ9HAT1 526 aa0.7□□□□□ -2.3
RNU2-55P-201ENST00000411146 DAZ3Q9NR90 486 aaKnown RBP0.7□□□□□ -2.3
RNU2-55P-201ENST00000411146 MRPL17Q9NRX2 175 aaKnown RBP0.7□□□□□ -2.3
RNU2-55P-201ENST00000411146 CHCHD3Q9NX63 227 aaKnown RBP0.7□□□□□ -2.3
RNU2-55P-201ENST00000411146 GMEB2Q9UKD1 530 aa0.7□□□□□ -2.3
RNU2-55P-201ENST00000411146 PSG11Q9UQ72 335 aa0.7□□□□□ -2.3
RNU2-55P-201ENST00000411146 KAT6BQ8WYB5 2073 aa0.69□□□□□ -2.3
RNU2-55P-201ENST00000411146 SLIT3O75094 1523 aa0.69□□□□□ -2.3
RNU2-55P-201ENST00000411146 A0A0B4J203 849 aa0.69□□□□□ -2.3
RNU2-55P-201ENST00000411146 ATP6AP2A0A1C7CYW4 349 aa0.69□□□□□ -2.3
RNU2-55P-201ENST00000411146 ANKRD18BA2A2Z9 1011 aa0.69□□□□□ -2.3
RNU2-55P-201ENST00000411146 SYNDIG1LA6NDD5 238 aa0.69□□□□□ -2.3
RNU2-55P-201ENST00000411146 G3V3Y1 287 aa0.69□□□□□ -2.3
RNU2-55P-201ENST00000411146 H0YIG0 161 aa0.69□□□□□ -2.3
RNU2-55P-201ENST00000411146 TRAF3IP2O43734 574 aaPredicted RBP0.69□□□□□ -2.3
RNU2-55P-201ENST00000411146 SELENOFO60613 162 aa0.69□□□□□ -2.3
RNU2-55P-201ENST00000411146 ANXA9O76027 345 aa0.69□□□□□ -2.3
RNU2-55P-201ENST00000411146 GOT2P00505 430 aaKnown RBP0.69□□□□□ -2.3
RNU2-55P-201ENST00000411146 ZNF823P16415 610 aa0.69□□□□□ -2.3
RNU2-55P-201ENST00000411146 PAX3P23760 479 aa0.69□□□□□ -2.3
RNU2-55P-201ENST00000411146 OR1D4P47884 311 aa0.69□□□□□ -2.3
RNU2-55P-201ENST00000411146 TKTL1P51854 596 aa0.69□□□□□ -2.3
RNU2-55P-201ENST00000411146 CAMK2DQ13557 499 aa0.69□□□□□ -2.3
RNU2-55P-201ENST00000411146 PSMD6Q15008 389 aa0.69□□□□□ -2.3
RNU2-55P-201ENST00000411146 KYAT1Q16773 422 aa0.69□□□□□ -2.3
RNU2-55P-201ENST00000411146 DCAF4L1Q3SXM0 396 aa0.69□□□□□ -2.3
RNU2-55P-201ENST00000411146 WDR78Q5VTH9 848 aa0.69□□□□□ -2.3
RNU2-55P-201ENST00000411146 ZFP2Q6ZN57 461 aa0.69□□□□□ -2.3
RNU2-55P-201ENST00000411146 CHST3Q7LGC8 479 aa0.69□□□□□ -2.3
RNU2-55P-201ENST00000411146 ARL14Q8N4G2 192 aa0.69□□□□□ -2.3
RNU2-55P-201ENST00000411146 DCAF4L2Q8NA75 395 aa0.69□□□□□ -2.3
RNU2-55P-201ENST00000411146 LINC01555Q8NAE3 123 aa0.69□□□□□ -2.3
RNU2-55P-201ENST00000411146 ZBTB44Q8NCP5 570 aa0.69□□□□□ -2.3
RNU2-55P-201ENST00000411146 BEST4Q8NFU0 473 aa0.69□□□□□ -2.3
RNU2-55P-201ENST00000411146 GRK7Q8WTQ7 553 aa0.69□□□□□ -2.3
RNU2-55P-201ENST00000411146 DHTKD1Q96HY7 919 aaPredicted RBP0.69□□□□□ -2.3
RNU2-55P-201ENST00000411146 GUCD1Q96NT3 240 aa0.69□□□□□ -2.3
RNU2-55P-201ENST00000411146 NAA11Q9BSU3 229 aaPredicted RBP0.69□□□□□ -2.3
RNU2-55P-201ENST00000411146 PLA2G12AQ9BZM1 189 aa0.69□□□□□ -2.3
RNU2-55P-201ENST00000411146 NXF3Q9H4D5 531 aaKnown RBP0.69□□□□□ -2.3
RNU2-55P-201ENST00000411146 SLC25A19Q9HC21 320 aa0.69□□□□□ -2.3
RNU2-55P-201ENST00000411146 NECAP2Q9NVZ3 263 aa0.69□□□□□ -2.3
RNU2-55P-201ENST00000411146 NSMCE4AQ9NXX6 385 aa0.69□□□□□ -2.3
RNU2-55P-201ENST00000411146 STOX2Q9P2F5 926 aaPredicted RBP0.69□□□□□ -2.3
RNU2-55P-201ENST00000411146 EIF3KQ9UBQ5 218 aaKnown RBP0.69□□□□□ -2.3
RNU2-55P-201ENST00000411146 PSORS1C1Q9UIG5 152 aa0.69□□□□□ -2.3
RNU2-55P-201ENST00000411146 RPH3AQ9Y2J0 694 aaPredicted RBP0.69□□□□□ -2.3
RNU2-55P-201ENST00000411146 WSB1Q9Y6I7 421 aa0.69□□□□□ -2.3
RNU2-55P-201ENST00000411146 BRWD3Q6RI45 1802 aa0.68□□□□□ -2.3
RNU2-55P-201ENST00000411146 IGKV1D-17A0A075B6S4 117 aa0.68□□□□□ -2.3
RNU2-55P-201ENST00000411146 USP27XA6NNY8 438 aa0.68□□□□□ -2.3
RNU2-55P-201ENST00000411146 KIAA0513O60268 411 aa0.68□□□□□ -2.3
RNU2-55P-201ENST00000411146 TBX10O75333 385 aa0.68□□□□□ -2.3
RNU2-55P-201ENST00000411146 NME6O75414 186 aaPredicted RBP0.68□□□□□ -2.3
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms