RNA–Protein interactions for RNA: ENST00000409326.6

PTCD3-202, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 522 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-202ENST00000409326 MARCOQ9UEW3 520 aaPredicted RBP18.92■□□□□ 0.62
PTCD3-202ENST00000409326 TEKT2Q9UIF3 430 aa18.92■□□□□ 0.62
PTCD3-202ENST00000409326 ZNF223Q9UK11 482 aaPredicted RBP18.92■□□□□ 0.62
PTCD3-202ENST00000409326 ZNF780BQ9Y6R6 833 aa18.92■□□□□ 0.62
PTCD3-202ENST00000409326 TRBV11-1A0A0K0K1C0 115 aa18.91■□□□□ 0.62
PTCD3-202ENST00000409326 A8MUI8 341 aa18.91■□□□□ 0.62
PTCD3-202ENST00000409326 SLCO1B7G3V0H7 640 aa18.91■□□□□ 0.62
PTCD3-202ENST00000409326 HDAC3O15379 428 aa18.91■□□□□ 0.62
PTCD3-202ENST00000409326 DPM1O60762 260 aa18.91■□□□□ 0.62
PTCD3-202ENST00000409326 BCKDHAP12694 445 aa18.91■□□□□ 0.62
PTCD3-202ENST00000409326 CSNK2A2P19784 350 aaPredicted RBP18.91■□□□□ 0.62
PTCD3-202ENST00000409326 SMU1Q2TAY7 513 aa18.91■□□□□ 0.62
PTCD3-202ENST00000409326 ZNF750Q32MQ0 723 aa18.91■□□□□ 0.62
PTCD3-202ENST00000409326 LINC00696Q6ZRV3 163 aa18.91■□□□□ 0.62
PTCD3-202ENST00000409326 LRRC34Q8IZ02 419 aa18.91■□□□□ 0.62
PTCD3-202ENST00000409326 SAMD14Q8IZD0 417 aaPredicted RBP18.91■□□□□ 0.62
PTCD3-202ENST00000409326 LGI4Q8N135 537 aa18.91■□□□□ 0.62
PTCD3-202ENST00000409326 SLC5A8Q8N695 610 aa18.91■□□□□ 0.62
PTCD3-202ENST00000409326 PIWIL2Q8TC59 973 aaKnown RBP18.91■□□□□ 0.62
PTCD3-202ENST00000409326 ZNF721Q8TF20 911 aa18.91■□□□□ 0.62
PTCD3-202ENST00000409326 CKAP2Q8WWK9 683 aa18.91■□□□□ 0.62
PTCD3-202ENST00000409326 RIT1Q92963 219 aa18.91■□□□□ 0.62
PTCD3-202ENST00000409326 EXOSC8Q96B26 276 aaKnown RBP18.91■□□□□ 0.62
PTCD3-202ENST00000409326 FBXL20Q96IG2 436 aa18.91■□□□□ 0.62
PTCD3-202ENST00000409326 ART5Q96L15 291 aa18.91■□□□□ 0.62
PTCD3-202ENST00000409326 TSSK3Q96PN8 268 aa18.91■□□□□ 0.62
PTCD3-202ENST00000409326 C1orf50Q9BV19 199 aa18.91■□□□□ 0.62
PTCD3-202ENST00000409326 AKTIPQ9H8T0 292 aa18.91■□□□□ 0.62
PTCD3-202ENST00000409326 MIEF1Q9NQG6 463 aa18.91■□□□□ 0.62
PTCD3-202ENST00000409326 EXO1Q9UQ84 846 aaKnown RBP18.91■□□□□ 0.62
PTCD3-202ENST00000409326 VPS4BO75351 444 aa18.9■□□□□ 0.62
PTCD3-202ENST00000409326 IGKV3-11P04433 115 aa18.9■□□□□ 0.62
PTCD3-202ENST00000409326 ATP1B1P05026 303 aa18.9■□□□□ 0.62
PTCD3-202ENST00000409326 KITP10721 976 aa18.9■□□□□ 0.62
PTCD3-202ENST00000409326 FEN1P39748 380 aaKnown RBP18.9■□□□□ 0.62
PTCD3-202ENST00000409326 ASMTP46597 345 aa18.9■□□□□ 0.62
PTCD3-202ENST00000409326 EMX2Q04743 252 aa18.9■□□□□ 0.62
PTCD3-202ENST00000409326 NFATC3Q12968 1075 aa18.9■□□□□ 0.62
PTCD3-202ENST00000409326 MAD2L1Q13257 205 aaPredicted RBP18.9■□□□□ 0.62
PTCD3-202ENST00000409326 CEBPEQ15744 281 aa18.9■□□□□ 0.62
PTCD3-202ENST00000409326 ABHD17BQ5VST6 288 aa18.9■□□□□ 0.62
PTCD3-202ENST00000409326 FAM180BQ6P0A1 224 aa18.9■□□□□ 0.62
PTCD3-202ENST00000409326 TICAM1Q8IUC6 712 aa18.9■□□□□ 0.62
PTCD3-202ENST00000409326 CRLF3Q8IUI8 442 aa18.9■□□□□ 0.62
PTCD3-202ENST00000409326 GALNT12Q8IXK2 581 aa18.9■□□□□ 0.62
PTCD3-202ENST00000409326 LRRC25Q8N386 305 aaPredicted RBP18.9■□□□□ 0.62
PTCD3-202ENST00000409326 ZNF321PQ8N8H1 164 aa18.9■□□□□ 0.62
PTCD3-202ENST00000409326 SENP5Q96HI0 755 aaPredicted RBP18.9■□□□□ 0.62
PTCD3-202ENST00000409326 ZNF354BQ96LW1 612 aa18.9■□□□□ 0.62
PTCD3-202ENST00000409326 MAGEB18Q96M61 343 aa18.9■□□□□ 0.62
PTCD3-202ENST00000409326 NPAS2Q99743 824 aa18.9■□□□□ 0.62
PTCD3-202ENST00000409326 DEFB126Q9BYW3 111 aa18.9■□□□□ 0.62
PTCD3-202ENST00000409326 CXorf21Q9HAI6 301 aa18.9■□□□□ 0.62
PTCD3-202ENST00000409326 SLC35C2Q9NQQ7 365 aa18.9■□□□□ 0.62
PTCD3-202ENST00000409326 GIMAP4Q9NUV9 329 aa18.9■□□□□ 0.62
PTCD3-202ENST00000409326 TAS2R7Q9NYW3 318 aa18.9■□□□□ 0.62
PTCD3-202ENST00000409326 COPS7AQ9UBW8 275 aa18.9■□□□□ 0.62
PTCD3-202ENST00000409326 ENTPD4Q9Y227 616 aa18.9■□□□□ 0.62
PTCD3-202ENST00000409326 SPENQ96T58 3664 aaKnown RBP18.9■□□□□ 0.62
PTCD3-202ENST00000409326 TRPC5OSA6NMA1 111 aa18.89■□□□□ 0.61
PTCD3-202ENST00000409326 EIF4E1BA6NMX2 242 aaKnown RBP18.89■□□□□ 0.61
PTCD3-202ENST00000409326 PRB1P04280 392 aa18.89■□□□□ 0.61
PTCD3-202ENST00000409326 PRPS2P11908 318 aa18.89■□□□□ 0.61
PTCD3-202ENST00000409326 NT5EP21589 574 aa18.89■□□□□ 0.61
PTCD3-202ENST00000409326 ERVK-8P63133 956 aa18.89■□□□□ 0.61
PTCD3-202ENST00000409326 DUSP2Q05923 314 aa18.89■□□□□ 0.61
PTCD3-202ENST00000409326 MEP1AQ16819 746 aa18.89■□□□□ 0.61
PTCD3-202ENST00000409326 ACER2Q5QJU3 275 aa18.89■□□□□ 0.61
PTCD3-202ENST00000409326 IL23RQ5VWK5 629 aa18.89■□□□□ 0.61
PTCD3-202ENST00000409326 FCRLBQ6BAA4 426 aa18.89■□□□□ 0.61
PTCD3-202ENST00000409326 HSDL2Q6YN16 418 aa18.89■□□□□ 0.61
PTCD3-202ENST00000409326 WDR75Q8IWA0 830 aaKnown RBP18.89■□□□□ 0.61
PTCD3-202ENST00000409326 ARMC10Q8N2F6 343 aa18.89■□□□□ 0.61
PTCD3-202ENST00000409326 LIX1Q8N485 282 aa18.89■□□□□ 0.61
PTCD3-202ENST00000409326 ARFGAP2Q8N6H7 521 aa18.89■□□□□ 0.61
PTCD3-202ENST00000409326 CLHC1Q8NHS4 586 aa18.89■□□□□ 0.61
PTCD3-202ENST00000409326 ZNF764Q96H86 408 aaPredicted RBP18.89■□□□□ 0.61
PTCD3-202ENST00000409326 CNPPD1Q9BV87 410 aa18.89■□□□□ 0.61
PTCD3-202ENST00000409326 RNF32Q9H0A6 362 aa18.89■□□□□ 0.61
PTCD3-202ENST00000409326 SLCO1B3Q9NPD5 702 aa18.89■□□□□ 0.61
PTCD3-202ENST00000409326 ASIC5Q9NY37 505 aa18.89■□□□□ 0.61
PTCD3-202ENST00000409326 NOP53Q9NZM5 478 aaKnown RBP18.89■□□□□ 0.61
PTCD3-202ENST00000409326 BAIAP2L1Q9UHR4 511 aa18.89■□□□□ 0.61
PTCD3-202ENST00000409326 ERVK-19Q9WJR5 959 aa18.89■□□□□ 0.61
PTCD3-202ENST00000409326 EIF3LQ9Y262 564 aaKnown RBP18.89■□□□□ 0.61
PTCD3-202ENST00000409326 HRKO00198 91 aa18.88■□□□□ 0.61
PTCD3-202ENST00000409326 SDHDO14521 159 aa18.88■□□□□ 0.61
PTCD3-202ENST00000409326 TBX19O60806 448 aa18.88■□□□□ 0.61
PTCD3-202ENST00000409326 ZFAND5O76080 213 aa18.88■□□□□ 0.61
PTCD3-202ENST00000409326 CT62P0C5K7 136 aa18.88■□□□□ 0.61
PTCD3-202ENST00000409326 CD97P48960 835 aa18.88■□□□□ 0.61
PTCD3-202ENST00000409326 KLRB1Q12918 225 aa18.88■□□□□ 0.61
PTCD3-202ENST00000409326 ZNF267Q14586 743 aaPredicted RBP18.88■□□□□ 0.61
PTCD3-202ENST00000409326 PRICKLE4Q2TBC4 344 aa18.88■□□□□ 0.61
PTCD3-202ENST00000409326 C6orf163Q5TEZ5 329 aa18.88■□□□□ 0.61
PTCD3-202ENST00000409326 RGS9BPQ6ZS82 235 aa18.88■□□□□ 0.61
PTCD3-202ENST00000409326 LARP4Q71RC2 724 aaKnown RBP eCLIP18.88■□□□□ 0.61
PTCD3-202ENST00000409326 RPS19BP1Q86WX3 136 aaKnown RBP18.88■□□□□ 0.61
PTCD3-202ENST00000409326 ZADH2Q8N4Q0 377 aa18.88■□□□□ 0.61
PTCD3-202ENST00000409326 RBMXL3Q8N7X1 1067 aaKnown RBP18.88■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms