RNA–Protein interactions for RNA: ENST00000409088.3

LRRTM4-201, Transcript of leucine rich repeat transmembrane neuronal 4, humanhuman

TSL 1 (best) BASIC

Gene LRRTM4, Length 3,616 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM4-201ENST00000409088 H3BSA7 217 aa3.76□□□□□ -1.81
LRRTM4-201ENST00000409088 EFSO43281 561 aa3.76□□□□□ -1.81
LRRTM4-201ENST00000409088 AIFM1O95831 613 aa3.76□□□□□ -1.81
LRRTM4-201ENST00000409088 IFNA14P01570 189 aa3.76□□□□□ -1.81
LRRTM4-201ENST00000409088 IGLV3-19P01714 112 aa3.76□□□□□ -1.81
LRRTM4-201ENST00000409088 ZNF888P0CJ79 500 aaPredicted RBP3.76□□□□□ -1.81
LRRTM4-201ENST00000409088 OR12D1P0DN82 309 aa3.76□□□□□ -1.81
LRRTM4-201ENST00000409088 GSTM2P28161 218 aa3.76□□□□□ -1.81
LRRTM4-201ENST00000409088 FRKP42685 505 aaPredicted RBP3.76□□□□□ -1.81
LRRTM4-201ENST00000409088 GSTM5P46439 218 aa3.76□□□□□ -1.81
LRRTM4-201ENST00000409088 PPM1FP49593 454 aaPredicted RBP3.76□□□□□ -1.81
LRRTM4-201ENST00000409088 TGM3Q08188 693 aa3.76□□□□□ -1.81
LRRTM4-201ENST00000409088 EPS8Q12929 822 aa3.76□□□□□ -1.81
LRRTM4-201ENST00000409088 MEP1AQ16819 746 aa3.76□□□□□ -1.81
LRRTM4-201ENST00000409088 DUSP7Q16829 419 aa3.76□□□□□ -1.81
LRRTM4-201ENST00000409088 CNPY1Q3B7I2 92 aa3.76□□□□□ -1.81
LRRTM4-201ENST00000409088 IQCCQ4KMZ1 466 aa3.76□□□□□ -1.81
LRRTM4-201ENST00000409088 DEFB134Q4QY38 66 aa3.76□□□□□ -1.81
LRRTM4-201ENST00000409088 MRM1Q6IN84 353 aaKnown RBP3.76□□□□□ -1.81
LRRTM4-201ENST00000409088 REEP3Q6NUK4 255 aa3.76□□□□□ -1.81
LRRTM4-201ENST00000409088 PIWIL3Q7Z3Z3 882 aaKnown RBP3.76□□□□□ -1.81
LRRTM4-201ENST00000409088 OR5D16Q8NGK9 328 aa3.76□□□□□ -1.81
LRRTM4-201ENST00000409088 ZFP28Q8NHY6 868 aa3.76□□□□□ -1.81
LRRTM4-201ENST00000409088 FLVCR1-AS1Q8TAF5 88 aa3.76□□□□□ -1.81
LRRTM4-201ENST00000409088 ZDHHC1Q8WTX9 485 aa3.76□□□□□ -1.81
LRRTM4-201ENST00000409088 SLC38A5Q8WUX1 472 aa3.76□□□□□ -1.81
LRRTM4-201ENST00000409088 NMD3Q96D46 503 aaKnown RBP3.76□□□□□ -1.81
LRRTM4-201ENST00000409088 CNRIP1Q96F85 164 aaPredicted RBP3.76□□□□□ -1.81
LRRTM4-201ENST00000409088 TMEM19Q96HH6 336 aa3.76□□□□□ -1.81
LRRTM4-201ENST00000409088 RDH12Q96NR8 316 aa3.76□□□□□ -1.81
LRRTM4-201ENST00000409088 MAPKAP1Q9BPZ7 522 aa3.76□□□□□ -1.81
LRRTM4-201ENST00000409088 MIR1-1HGQ9H1L0 117 aa3.76□□□□□ -1.81
LRRTM4-201ENST00000409088 RIBC2Q9H4K1 309 aa3.76□□□□□ -1.81
LRRTM4-201ENST00000409088 ACSS1Q9NUB1 689 aaPredicted RBP3.76□□□□□ -1.81
LRRTM4-201ENST00000409088 TAS2R7Q9NYW3 318 aa3.76□□□□□ -1.81
LRRTM4-201ENST00000409088 EHD3Q9NZN3 535 aa3.76□□□□□ -1.81
LRRTM4-201ENST00000409088 NDUFAF4Q9P032 175 aa3.76□□□□□ -1.81
LRRTM4-201ENST00000409088 NDUFA13Q9P0J0 144 aa3.76□□□□□ -1.81
LRRTM4-201ENST00000409088 KIF17Q9P2E2 1029 aa3.76□□□□□ -1.81
LRRTM4-201ENST00000409088 FBXL21Q9UKT6 434 aa3.76□□□□□ -1.81
LRRTM4-201ENST00000409088 ENTPD4Q9Y227 616 aa3.76□□□□□ -1.81
LRRTM4-201ENST00000409088 PCDHGA8Q9Y5G5 932 aa3.76□□□□□ -1.81
LRRTM4-201ENST00000409088 TDRD6O60522 2096 aaKnown RBP3.76□□□□□ -1.81
LRRTM4-201ENST00000409088 LOC105369274A0A096LPK9 316 aa3.76□□□□□ -1.81
LRRTM4-201ENST00000409088 IGHV1OR15-9A0A0B4J2B8 117 aa3.76□□□□□ -1.81
LRRTM4-201ENST00000409088 LOC102723532A0A0G2JNH3 316 aa3.76□□□□□ -1.81
LRRTM4-201ENST00000409088 KRBA1A5PL33 1030 aa3.76□□□□□ -1.81
LRRTM4-201ENST00000409088 PRAMEF25A6NGN4 478 aa3.76□□□□□ -1.81
LRRTM4-201ENST00000409088 ZNF860A6NHJ4 632 aa3.76□□□□□ -1.81
LRRTM4-201ENST00000409088 OR5K4A6NMS3 321 aa3.76□□□□□ -1.81
LRRTM4-201ENST00000409088 B4DGG1 531 aa3.76□□□□□ -1.81
LRRTM4-201ENST00000409088 J3KTA2 159 aa3.76□□□□□ -1.81
LRRTM4-201ENST00000409088 TNFRSF11BO00300 401 aa3.76□□□□□ -1.81
LRRTM4-201ENST00000409088 HMGN4O00479 90 aa3.76□□□□□ -1.81
LRRTM4-201ENST00000409088 SOX1O00570 391 aaPredicted RBP3.76□□□□□ -1.81
LRRTM4-201ENST00000409088 TOR1BO14657 336 aa3.76□□□□□ -1.81
LRRTM4-201ENST00000409088 P2RX6O15547 441 aa3.76□□□□□ -1.81
LRRTM4-201ENST00000409088 PROM1O43490 865 aa3.76□□□□□ -1.81
LRRTM4-201ENST00000409088 SLC28A2O43868 658 aa3.76□□□□□ -1.81
LRRTM4-201ENST00000409088 NDUFS2O75306 463 aa3.76□□□□□ -1.81
LRRTM4-201ENST00000409088 ZNF217O75362 1048 aa3.76□□□□□ -1.81
LRRTM4-201ENST00000409088 NME6O75414 186 aaPredicted RBP3.76□□□□□ -1.81
LRRTM4-201ENST00000409088 IL9P15248 144 aa3.76□□□□□ -1.81
LRRTM4-201ENST00000409088 IL7RP16871 459 aa3.76□□□□□ -1.81
LRRTM4-201ENST00000409088 CSNK2A2P19784 350 aaPredicted RBP3.76□□□□□ -1.81
LRRTM4-201ENST00000409088 MATN1P21941 496 aa3.76□□□□□ -1.81
LRRTM4-201ENST00000409088 LSSP48449 732 aa3.76□□□□□ -1.81
LRRTM4-201ENST00000409088 BLKP51451 505 aa3.76□□□□□ -1.81
LRRTM4-201ENST00000409088 CDH12P55289 794 aa3.76□□□□□ -1.81
LRRTM4-201ENST00000409088 ITGA1P56199 1179 aa3.76□□□□□ -1.81
LRRTM4-201ENST00000409088 SPIBQ01892 262 aa3.76□□□□□ -1.81
LRRTM4-201ENST00000409088 HHEXQ03014 270 aa3.76□□□□□ -1.81
LRRTM4-201ENST00000409088 DUSP2Q05923 314 aa3.76□□□□□ -1.81
LRRTM4-201ENST00000409088 LASP1Q14847 261 aaKnown RBP3.76□□□□□ -1.81
LRRTM4-201ENST00000409088 GPR19Q15760 415 aa3.76□□□□□ -1.81
LRRTM4-201ENST00000409088 SYPL1Q16563 259 aa3.76□□□□□ -1.81
LRRTM4-201ENST00000409088 RFX4Q33E94 735 aa3.76□□□□□ -1.81
LRRTM4-201ENST00000409088 KCTD21Q4G0X4 260 aa3.76□□□□□ -1.81
LRRTM4-201ENST00000409088 CRB2Q5IJ48 1285 aa3.76□□□□□ -1.81
LRRTM4-201ENST00000409088 FCRL6Q6DN72 434 aa3.76□□□□□ -1.81
LRRTM4-201ENST00000409088 FRMPD2BQ6IN97 320 aa3.76□□□□□ -1.81
LRRTM4-201ENST00000409088 OLIG3Q7RTU3 272 aa3.76□□□□□ -1.81
LRRTM4-201ENST00000409088 ZNF438Q7Z4V0 828 aa3.76□□□□□ -1.81
LRRTM4-201ENST00000409088 TSEN54Q7Z6J9 526 aaKnown RBP3.76□□□□□ -1.81
LRRTM4-201ENST00000409088 TMEFF1Q8IYR6 380 aa3.76□□□□□ -1.81
LRRTM4-201ENST00000409088 OR4N4Q8N0Y3 316 aa3.76□□□□□ -1.81
LRRTM4-201ENST00000409088 PIK3C3Q8NEB9 887 aa3.76□□□□□ -1.81
LRRTM4-201ENST00000409088 PJA1Q8NG27 643 aa3.76□□□□□ -1.81
LRRTM4-201ENST00000409088 UTP15Q8TED0 518 aaKnown RBP3.76□□□□□ -1.81
LRRTM4-201ENST00000409088 GAL3ST3Q96A11 431 aa3.76□□□□□ -1.81
LRRTM4-201ENST00000409088 DGCR14Q96DF8 476 aaKnown RBP3.76□□□□□ -1.81
LRRTM4-201ENST00000409088 SLC35G5Q96KT7 338 aa3.76□□□□□ -1.81
LRRTM4-201ENST00000409088 OR2A5Q96R48 311 aa3.76□□□□□ -1.81
LRRTM4-201ENST00000409088 ZNF300Q96RE9 604 aaPredicted RBP3.76□□□□□ -1.81
LRRTM4-201ENST00000409088 OR51I1Q9H343 314 aa3.76□□□□□ -1.81
LRRTM4-201ENST00000409088 ANKRA2Q9H9E1 313 aa3.76□□□□□ -1.81
LRRTM4-201ENST00000409088 POT1Q9NUX5 634 aa3.76□□□□□ -1.81
LRRTM4-201ENST00000409088 ANKMY1Q9P2S6 941 aa3.76□□□□□ -1.81
LRRTM4-201ENST00000409088 DUSP12Q9UNI6 340 aa3.76□□□□□ -1.81
LRRTM4-201ENST00000409088 PADI2Q9Y2J8 665 aa3.76□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms