RNA–Protein interactions for RNA: ENST00000409050.1

SCN1A-203, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

TSL 5 BASIC

Gene SCN1A, Length 5,946 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-203ENST00000409050 DKKL1Q9UK85 242 aa5.84□□□□□ -1.47
SCN1A-203ENST00000409050 DLGAP4Q9Y2H0 992 aa5.84□□□□□ -1.47
SCN1A-203ENST00000409050 BACE2Q9Y5Z0 518 aa5.84□□□□□ -1.47
SCN1A-203ENST00000409050 ZNF536O15090 1300 aa5.84□□□□□ -1.47
SCN1A-203ENST00000409050 SOWAHBA6NEL2 793 aa5.84□□□□□ -1.47
SCN1A-203ENST00000409050 CDC7O00311 574 aa5.84□□□□□ -1.47
SCN1A-203ENST00000409050 GPRIN2O60269 458 aa5.84□□□□□ -1.47
SCN1A-203ENST00000409050 UBBP0CG47 229 aa5.84□□□□□ -1.47
SCN1A-203ENST00000409050 UBCP0CG48 685 aaKnown RBP5.84□□□□□ -1.47
SCN1A-203ENST00000409050 ZNF35P13682 527 aa5.84□□□□□ -1.47
SCN1A-203ENST00000409050 CCND3P30281 292 aaPredicted RBP5.84□□□□□ -1.47
SCN1A-203ENST00000409050 RPS27AP62979 156 aaKnown RBP5.84□□□□□ -1.47
SCN1A-203ENST00000409050 UBA52P62987 128 aaKnown RBP5.84□□□□□ -1.47
SCN1A-203ENST00000409050 RPS21P63220 83 aaKnown RBP5.84□□□□□ -1.47
SCN1A-203ENST00000409050 RAB40BQ12829 278 aa5.84□□□□□ -1.47
SCN1A-203ENST00000409050 SLC39A4Q6P5W5 647 aa5.84□□□□□ -1.47
SCN1A-203ENST00000409050 EMID1Q96A84 441 aaPredicted RBP5.84□□□□□ -1.47
SCN1A-203ENST00000409050 MALSU1Q96EH3 234 aa5.84□□□□□ -1.47
SCN1A-203ENST00000409050 TGM7Q96PF1 710 aa5.84□□□□□ -1.47
SCN1A-203ENST00000409050 OR14A2Q96R54 314 aa5.84□□□□□ -1.47
SCN1A-203ENST00000409050 ADAM7Q9H2U9 754 aa5.84□□□□□ -1.47
SCN1A-203ENST00000409050 DPEP3Q9H4B8 488 aa5.84□□□□□ -1.47
SCN1A-203ENST00000409050 APMAPQ9HDC9 416 aa5.84□□□□□ -1.47
SCN1A-203ENST00000409050 MGAT4CQ9UBM8 478 aa5.84□□□□□ -1.47
SCN1A-203ENST00000409050 TAC3Q9UHF0 121 aa5.84□□□□□ -1.47
SCN1A-203ENST00000409050 FBXO7Q9Y3I1 522 aa5.84□□□□□ -1.47
SCN1A-203ENST00000409050 RIPK3Q9Y572 518 aa5.84□□□□□ -1.47
SCN1A-203ENST00000409050 HMX3A6NHT5 357 aa5.84□□□□□ -1.47
SCN1A-203ENST00000409050 TMEM88BA6NKF7 163 aa5.84□□□□□ -1.47
SCN1A-203ENST00000409050 HSBP1L1C9JCN9 74 aa5.84□□□□□ -1.47
SCN1A-203ENST00000409050 TMX2-CTNND1H3BSU7 103 aa5.84□□□□□ -1.47
SCN1A-203ENST00000409050 PIRO00625 290 aa5.84□□□□□ -1.47
SCN1A-203ENST00000409050 SCAMP2O15127 329 aaKnown RBP5.84□□□□□ -1.47
SCN1A-203ENST00000409050 CCL16O15467 120 aa5.84□□□□□ -1.47
SCN1A-203ENST00000409050 OR2T1O43869 369 aa5.84□□□□□ -1.47
SCN1A-203ENST00000409050 ZNF623O75123 536 aa5.84□□□□□ -1.47
SCN1A-203ENST00000409050 C6orf47O95873 294 aa5.84□□□□□ -1.47
SCN1A-203ENST00000409050 TGFB1P01137 390 aa5.84□□□□□ -1.47
SCN1A-203ENST00000409050 SMPD1P17405 629 aa5.84□□□□□ -1.47
SCN1A-203ENST00000409050 AMY2BP19961 511 aa5.84□□□□□ -1.47
SCN1A-203ENST00000409050 ACRV1P26436 265 aa5.84□□□□□ -1.47
SCN1A-203ENST00000409050 HOXC13P31276 330 aa5.84□□□□□ -1.47
SCN1A-203ENST00000409050 PCGF2P35227 344 aa5.84□□□□□ -1.47
SCN1A-203ENST00000409050 CAV3P56539 151 aa5.84□□□□□ -1.47
SCN1A-203ENST00000409050 RPS13P62277 151 aaKnown RBP5.84□□□□□ -1.47
SCN1A-203ENST00000409050 HMGCS1Q01581 520 aa5.84□□□□□ -1.47
SCN1A-203ENST00000409050 NFATC2Q13469 925 aa5.84□□□□□ -1.47
SCN1A-203ENST00000409050 PEA15Q15121 130 aa5.84□□□□□ -1.47
SCN1A-203ENST00000409050 ARHGAP40Q5TG30 622 aa5.84□□□□□ -1.47
SCN1A-203ENST00000409050 DCAF12L1Q5VU92 463 aa5.84□□□□□ -1.47
SCN1A-203ENST00000409050 CPZQ66K79 652 aa5.84□□□□□ -1.47
SCN1A-203ENST00000409050 WDR88Q6ZMY6 472 aa5.84□□□□□ -1.47
SCN1A-203ENST00000409050 ABHD12BQ7Z5M8 362 aaPredicted RBP5.84□□□□□ -1.47
SCN1A-203ENST00000409050 SERPINA11Q86U17 422 aa5.84□□□□□ -1.47
SCN1A-203ENST00000409050 RNF130Q86XS8 419 aa5.84□□□□□ -1.47
SCN1A-203ENST00000409050 TMEM156Q8N614 296 aa5.84□□□□□ -1.47
SCN1A-203ENST00000409050 TEX26Q8N6G2 289 aa5.84□□□□□ -1.47
SCN1A-203ENST00000409050 HORMAD2Q8N7B1 307 aa5.84□□□□□ -1.47
SCN1A-203ENST00000409050 ZNF283Q8N7M2 679 aa5.84□□□□□ -1.47
SCN1A-203ENST00000409050 OR6K2Q8NGY2 324 aa5.84□□□□□ -1.47
SCN1A-203ENST00000409050 CD300LFQ8TDQ1 290 aa5.84□□□□□ -1.47
SCN1A-203ENST00000409050 DHRS1Q96LJ7 313 aa5.84□□□□□ -1.47
SCN1A-203ENST00000409050 CNTNAP3BQ96NU0 1288 aa5.84□□□□□ -1.47
SCN1A-203ENST00000409050 CASD1Q96PB1 797 aa5.84□□□□□ -1.47
SCN1A-203ENST00000409050 NELL2Q99435 816 aa5.84□□□□□ -1.47
SCN1A-203ENST00000409050 PINK1Q9BXM7 581 aa5.84□□□□□ -1.47
SCN1A-203ENST00000409050 CACNG6Q9BXT2 260 aa5.84□□□□□ -1.47
SCN1A-203ENST00000409050 SLC25A31Q9H0C2 315 aa5.84□□□□□ -1.47
SCN1A-203ENST00000409050 PREBQ9HCU5 417 aa5.84□□□□□ -1.47
SCN1A-203ENST00000409050 ZNF334Q9HCZ1 680 aaPredicted RBP5.84□□□□□ -1.47
SCN1A-203ENST00000409050 ZNF175Q9Y473 711 aa5.84□□□□□ -1.47
SCN1A-203ENST00000409050 PCDHAC2Q9Y5I4 1007 aa5.84□□□□□ -1.47
SCN1A-203ENST00000409050 LTBP3Q9NS15 1303 aa5.84□□□□□ -1.47
SCN1A-203ENST00000409050 FAM230AA0A1W2PPH8 454 aa5.84□□□□□ -1.47
SCN1A-203ENST00000409050 CIB4A0PJX0 185 aa5.84□□□□□ -1.47
SCN1A-203ENST00000409050 ARVCFO00192 962 aa5.84□□□□□ -1.47
SCN1A-203ENST00000409050 SLC1A7O00341 560 aa5.84□□□□□ -1.47
SCN1A-203ENST00000409050 FOXE1O00358 373 aaPredicted RBP5.84□□□□□ -1.47
SCN1A-203ENST00000409050 RFPL3O75679 317 aa5.84□□□□□ -1.47
SCN1A-203ENST00000409050 IL1R2P27930 398 aa5.84□□□□□ -1.47
SCN1A-203ENST00000409050 SRPXP78539 464 aa5.84□□□□□ -1.47
SCN1A-203ENST00000409050 CRYZQ08257 329 aaKnown RBP5.84□□□□□ -1.47
SCN1A-203ENST00000409050 GK2Q14410 553 aaPredicted RBP5.84□□□□□ -1.47
SCN1A-203ENST00000409050 FAM205BPQ63HN1 556 aa5.84□□□□□ -1.47
SCN1A-203ENST00000409050 CCBE1Q6UXH8 406 aaPredicted RBP5.84□□□□□ -1.47
SCN1A-203ENST00000409050 ISLR2Q6UXK2 745 aa5.84□□□□□ -1.47
SCN1A-203ENST00000409050 LIX1LQ8IVB5 337 aa5.84□□□□□ -1.47
SCN1A-203ENST00000409050 PQLC3Q8N755 202 aa5.84□□□□□ -1.47
SCN1A-203ENST00000409050 OR6T1Q8NGN1 323 aa5.84□□□□□ -1.47
SCN1A-203ENST00000409050 ZNF461Q8TAF7 563 aa5.84□□□□□ -1.47
SCN1A-203ENST00000409050 TMEM174Q8WUU8 243 aa5.84□□□□□ -1.47
SCN1A-203ENST00000409050 TANKQ92844 425 aa5.84□□□□□ -1.47
SCN1A-203ENST00000409050 SMARCD2Q92925 531 aa5.84□□□□□ -1.47
SCN1A-203ENST00000409050 SLC25A36Q96CQ1 311 aa5.84□□□□□ -1.47
SCN1A-203ENST00000409050 OR2M2Q96R28 347 aa5.84□□□□□ -1.47
SCN1A-203ENST00000409050 ABCG8Q9H221 673 aa5.84□□□□□ -1.47
SCN1A-203ENST00000409050 KCNIP2Q9NS61 270 aa5.84□□□□□ -1.47
SCN1A-203ENST00000409050 C13orf42A0A1B0GVH6 325 aa5.84□□□□□ -1.48
SCN1A-203ENST00000409050 LRP5LA4QPB2 252 aa5.84□□□□□ -1.48
SCN1A-203ENST00000409050 PCP4L1A6NKN8 68 aa5.84□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms