RNA–Protein interactions for RNA: ENST00000408314.1

SNORD88A-201, Transcript of small nucleolar RNA, C/D box 88A, humanhuman

BASIC

Gene SNORD88A, Length 91 nt, Biotype snoRNA, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD88A-201ENST00000408314 AGAP11Q8TF27 550 aa8.41□□□□□ -1.06
SNORD88A-201ENST00000408314 ZNF483Q8TF39 744 aaPredicted RBP8.41□□□□□ -1.06
SNORD88A-201ENST00000408314 ASB5Q8WWX0 329 aa8.41□□□□□ -1.06
SNORD88A-201ENST00000408314 MARVELD3Q96A59 401 aa8.41□□□□□ -1.06
SNORD88A-201ENST00000408314 SPACA9Q96E40 222 aaPredicted RBP8.41□□□□□ -1.06
SNORD88A-201ENST00000408314 CDK15Q96Q40 435 aa8.41□□□□□ -1.06
SNORD88A-201ENST00000408314 GAL3ST4Q96RP7 486 aa8.41□□□□□ -1.06
SNORD88A-201ENST00000408314 SORBS1Q9BX66 1292 aaKnown RBP8.41□□□□□ -1.06
SNORD88A-201ENST00000408314 ZNF717Q9BY31 904 aaPredicted RBP8.41□□□□□ -1.06
SNORD88A-201ENST00000408314 IL1RL2Q9HB29 575 aa8.41□□□□□ -1.06
SNORD88A-201ENST00000408314 PLSCR2Q9NRY7 297 aa8.41□□□□□ -1.06
SNORD88A-201ENST00000408314 ZNF358Q9NW07 568 aa8.41□□□□□ -1.06
SNORD88A-201ENST00000408314 MID2Q9UJV3 735 aa8.41□□□□□ -1.06
SNORD88A-201ENST00000408314 SLC12A4Q9UP95 1085 aa8.41□□□□□ -1.06
SNORD88A-201ENST00000408314 ERVK-19Q9WJR5 959 aa8.41□□□□□ -1.06
SNORD88A-201ENST00000408314 ASB4Q9Y574 426 aa8.41□□□□□ -1.06
SNORD88A-201ENST00000408314 CROCCQ5TZA2 2017 aa8.41□□□□□ -1.06
SNORD88A-201ENST00000408314 C2orf92A0A1B0GVN3 265 aa8.4□□□□□ -1.06
SNORD88A-201ENST00000408314 A0A1W2PR48 441 aa8.4□□□□□ -1.06
SNORD88A-201ENST00000408314 TMEM200CA6NKL6 621 aa8.4□□□□□ -1.06
SNORD88A-201ENST00000408314 ENO4A6NNW6 628 aa8.4□□□□□ -1.06
SNORD88A-201ENST00000408314 TMPRSS11DO60235 418 aa8.4□□□□□ -1.06
SNORD88A-201ENST00000408314 GLRA3O75311 464 aa8.4□□□□□ -1.06
SNORD88A-201ENST00000408314 SUPT7LO94864 414 aa8.4□□□□□ -1.06
SNORD88A-201ENST00000408314 CLDN14O95500 239 aa8.4□□□□□ -1.06
SNORD88A-201ENST00000408314 KLK1P06870 262 aa8.4□□□□□ -1.06
SNORD88A-201ENST00000408314 COX6B1P14854 86 aa8.4□□□□□ -1.06
SNORD88A-201ENST00000408314 KRT15P19012 456 aa8.4□□□□□ -1.06
SNORD88A-201ENST00000408314 COL8A1P27658 744 aa8.4□□□□□ -1.06
SNORD88A-201ENST00000408314 HTR1EP28566 365 aa8.4□□□□□ -1.06
SNORD88A-201ENST00000408314 HMOX2P30519 316 aa8.4□□□□□ -1.06
SNORD88A-201ENST00000408314 GSTM5P46439 218 aa8.4□□□□□ -1.06
SNORD88A-201ENST00000408314 ST13P50502 369 aaKnown RBP8.4□□□□□ -1.06
SNORD88A-201ENST00000408314 NEK2P51955 445 aa8.4□□□□□ -1.06
SNORD88A-201ENST00000408314 PKNOX1P55347 436 aa8.4□□□□□ -1.06
SNORD88A-201ENST00000408314 TRA2BP62995 288 aaKnown RBP8.4□□□□□ -1.06
SNORD88A-201ENST00000408314 KCNJ2P63252 427 aa8.4□□□□□ -1.06
SNORD88A-201ENST00000408314 PSPHP78330 225 aa8.4□□□□□ -1.06
SNORD88A-201ENST00000408314 CLCQ05315 142 aa8.4□□□□□ -1.06
SNORD88A-201ENST00000408314 LCP2Q13094 533 aa8.4□□□□□ -1.06
SNORD88A-201ENST00000408314 HYAL4Q2M3T9 481 aa8.4□□□□□ -1.06
SNORD88A-201ENST00000408314 SPIN4Q56A73 249 aa8.4□□□□□ -1.06
SNORD88A-201ENST00000408314 CMPK2Q5EBM0 449 aa8.4□□□□□ -1.06
SNORD88A-201ENST00000408314 PIGGQ5H8A4 983 aa8.4□□□□□ -1.06
SNORD88A-201ENST00000408314 SP5Q6BEB4 398 aaPredicted RBP8.4□□□□□ -1.06
SNORD88A-201ENST00000408314 HIST2H2BCQ6DN03 193 aa8.4□□□□□ -1.06
SNORD88A-201ENST00000408314 GPRIN3Q6ZVF9 776 aa8.4□□□□□ -1.06
SNORD88A-201ENST00000408314 ACAD11Q709F0 780 aa8.4□□□□□ -1.06
SNORD88A-201ENST00000408314 COMMD6Q7Z4G1 85 aa8.4□□□□□ -1.06
SNORD88A-201ENST00000408314 GDF7Q7Z4P5 450 aa8.4□□□□□ -1.06
SNORD88A-201ENST00000408314 CD163Q86VB7 1156 aa8.4□□□□□ -1.06
SNORD88A-201ENST00000408314 TICAM1Q8IUC6 712 aa8.4□□□□□ -1.06
SNORD88A-201ENST00000408314 C9orf40Q8IXQ3 194 aa8.4□□□□□ -1.06
SNORD88A-201ENST00000408314 FBXW8Q8N3Y1 598 aa8.4□□□□□ -1.06
SNORD88A-201ENST00000408314 RNF175Q8N4F7 328 aa8.4□□□□□ -1.06
SNORD88A-201ENST00000408314 FAM13CQ8NE31 585 aa8.4□□□□□ -1.06
SNORD88A-201ENST00000408314 C17orf47Q8NEP4 570 aa8.4□□□□□ -1.06
SNORD88A-201ENST00000408314 UHMK1Q8TAS1 419 aaKnown RBP8.4□□□□□ -1.06
SNORD88A-201ENST00000408314 PAQR8Q8TEZ7 354 aa8.4□□□□□ -1.06
SNORD88A-201ENST00000408314 CA5BP1Q8WTZ4 195 aa8.4□□□□□ -1.06
SNORD88A-201ENST00000408314 TP53INP1Q96A56 240 aa8.4□□□□□ -1.06
SNORD88A-201ENST00000408314 SARAFQ96BY9 339 aa8.4□□□□□ -1.06
SNORD88A-201ENST00000408314 MTFMTQ96DP5 389 aaKnown RBP8.4□□□□□ -1.06
SNORD88A-201ENST00000408314 ZNF382Q96SR6 550 aa8.4□□□□□ -1.06
SNORD88A-201ENST00000408314 SECISBP2Q96T21 854 aaKnown RBP8.4□□□□□ -1.06
SNORD88A-201ENST00000408314 TTTY12Q9BZ98 90 aa8.4□□□□□ -1.06
SNORD88A-201ENST00000408314 WWTR1Q9GZV5 400 aa8.4□□□□□ -1.06
SNORD88A-201ENST00000408314 ZDHHC11Q9H8X9 412 aa8.4□□□□□ -1.06
SNORD88A-201ENST00000408314 GIMAP4Q9NUV9 329 aa8.4□□□□□ -1.06
SNORD88A-201ENST00000408314 QPCTLQ9NXS2 382 aa8.4□□□□□ -1.06
SNORD88A-201ENST00000408314 VPS29Q9UBQ0 182 aa8.4□□□□□ -1.06
SNORD88A-201ENST00000408314 DCDC2Q9UHG0 476 aa8.4□□□□□ -1.06
SNORD88A-201ENST00000408314 TEX15Q9BXT5 2789 aa8.4□□□□□ -1.06
SNORD88A-201ENST00000408314 A0A1B0GTH9 108 aa8.39□□□□□ -1.07
SNORD88A-201ENST00000408314 MYOCOSA0A1B0GUC4 107 aa8.39□□□□□ -1.07
SNORD88A-201ENST00000408314 FAM166BA8MTA8 275 aa8.39□□□□□ -1.07
SNORD88A-201ENST00000408314 SUSD5O60279 629 aa8.39□□□□□ -1.07
SNORD88A-201ENST00000408314 HCN1O60741 890 aa8.39□□□□□ -1.07
SNORD88A-201ENST00000408314 ULK1O75385 1050 aa8.39□□□□□ -1.07
SNORD88A-201ENST00000408314 GLSO94925 669 aaPredicted RBP8.39□□□□□ -1.07
SNORD88A-201ENST00000408314 ESRRBO95718 433 aa8.39□□□□□ -1.07
SNORD88A-201ENST00000408314 IGHG3P01860 377 aa8.39□□□□□ -1.07
SNORD88A-201ENST00000408314 HOXD4P09016 255 aaPredicted RBP8.39□□□□□ -1.07
SNORD88A-201ENST00000408314 FBXO45P0C2W1 286 aa8.39□□□□□ -1.07
SNORD88A-201ENST00000408314 RHOXF2BP0C7M4 288 aa8.39□□□□□ -1.07
SNORD88A-201ENST00000408314 CPMP14384 443 aa8.39□□□□□ -1.07
SNORD88A-201ENST00000408314 PORP16435 677 aaPredicted RBP8.39□□□□□ -1.07
SNORD88A-201ENST00000408314 CSNK2A2P19784 350 aaPredicted RBP8.39□□□□□ -1.07
SNORD88A-201ENST00000408314 IMPDH1P20839 514 aa8.39□□□□□ -1.07
SNORD88A-201ENST00000408314 NT5EP21589 574 aa8.39□□□□□ -1.07
SNORD88A-201ENST00000408314 GCKP35557 465 aa8.39□□□□□ -1.07
SNORD88A-201ENST00000408314 RFC3P40938 356 aa8.39□□□□□ -1.07
SNORD88A-201ENST00000408314 CCT5P48643 541 aa8.39□□□□□ -1.07
SNORD88A-201ENST00000408314 XKP51811 444 aa8.39□□□□□ -1.07
SNORD88A-201ENST00000408314 SLC37A1P57057 533 aa8.39□□□□□ -1.07
SNORD88A-201ENST00000408314 HSF1Q00613 529 aa8.39□□□□□ -1.07
SNORD88A-201ENST00000408314 ACSM2AQ08AH3 577 aa8.39□□□□□ -1.07
SNORD88A-201ENST00000408314 EBPQ15125 230 aaKnown RBP8.39□□□□□ -1.07
SNORD88A-201ENST00000408314 RPS6KA2Q15349 733 aa8.39□□□□□ -1.07
SNORD88A-201ENST00000408314 SF3B4Q15427 424 aaKnown RBP eCLIP8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms