RNA–Protein interactions for RNA: ENST00000407977.6

RNF43-201, Transcript of ring finger protein 43, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RNF43, Length 5,516 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-201ENST00000407977 TREX2Q9BQ50 279 aaPredicted RBP12.42□□□□□ -0.42
RNF43-201ENST00000407977 ZNF649Q9BS31 505 aa12.42□□□□□ -0.42
RNF43-201ENST00000407977 NT5DC2Q9H857 520 aa12.42□□□□□ -0.42
RNF43-201ENST00000407977 ASB6Q9NWX5 421 aa12.42□□□□□ -0.42
RNF43-201ENST00000407977 SMAD9O15198 467 aaKnown RBP12.42□□□□□ -0.42
RNF43-201ENST00000407977 FMO6PO60774 539 aa12.42□□□□□ -0.42
RNF43-201ENST00000407977 FGF4P08620 206 aa12.42□□□□□ -0.42
RNF43-201ENST00000407977 MLLT1Q03111 559 aaPredicted RBP12.42□□□□□ -0.42
RNF43-201ENST00000407977 PCBP2Q15366 365 aaKnown RBP eCLIP12.42□□□□□ -0.426e-7■■■□□ 15.4
RNF43-201ENST00000407977 SETD7Q8WTS6 366 aaKnown RBP12.42□□□□□ -0.42
RNF43-201ENST00000407977 OTUB2Q96DC9 234 aa12.42□□□□□ -0.42
RNF43-201ENST00000407977 ANKMY1Q9P2S6 941 aa12.42□□□□□ -0.42
RNF43-201ENST00000407977 Q9Y3F1 56 aa12.42□□□□□ -0.42
RNF43-201ENST00000407977 USP2O75604 605 aaPredicted RBP12.42□□□□□ -0.42
RNF43-201ENST00000407977 IFNA17P01571 189 aa12.42□□□□□ -0.42
RNF43-201ENST00000407977 OR12D1P0DN82 309 aa12.42□□□□□ -0.42
RNF43-201ENST00000407977 T-ENOLP0DO92 83 aa12.42□□□□□ -0.42
RNF43-201ENST00000407977 ZNF8P17098 575 aaPredicted RBP12.42□□□□□ -0.42
RNF43-201ENST00000407977 PRKACBP22694 351 aa12.42□□□□□ -0.42
RNF43-201ENST00000407977 PITPNBP48739 271 aa12.42□□□□□ -0.42
RNF43-201ENST00000407977 ARHGAP1Q07960 439 aa12.42□□□□□ -0.42
RNF43-201ENST00000407977 ITPRIPL2Q3MIP1 535 aa12.42□□□□□ -0.42
RNF43-201ENST00000407977 ENPP7Q6UWV6 458 aa12.42□□□□□ -0.42
RNF43-201ENST00000407977 OSTM1Q86WC4 334 aa12.42□□□□□ -0.42
RNF43-201ENST00000407977 SYT14Q8NB59 555 aa12.42□□□□□ -0.42
RNF43-201ENST00000407977 OR4K17Q8NGC6 315 aa12.42□□□□□ -0.42
RNF43-201ENST00000407977 SMPDL3BQ92485 455 aa12.42□□□□□ -0.42
RNF43-201ENST00000407977 FAM46BQ96A09 425 aa12.42□□□□□ -0.42
RNF43-201ENST00000407977 ENPP4Q9Y6X5 453 aa12.42□□□□□ -0.42
RNF43-201ENST00000407977 A0A0G2JLL6 359 aaPredicted RBP12.41□□□□□ -0.42
RNF43-201ENST00000407977 MRPL3P09001 348 aaKnown RBP12.41□□□□□ -0.42
RNF43-201ENST00000407977 CD3GP09693 182 aa12.41□□□□□ -0.42
RNF43-201ENST00000407977 CDK2P24941 298 aa12.41□□□□□ -0.42
RNF43-201ENST00000407977 CD34P28906 385 aa12.41□□□□□ -0.42
RNF43-201ENST00000407977 ADH7P40394 386 aa12.41□□□□□ -0.42
RNF43-201ENST00000407977 RAB8AP61006 207 aa12.41□□□□□ -0.42
RNF43-201ENST00000407977 GPR17Q13304 367 aa12.41□□□□□ -0.42
RNF43-201ENST00000407977 FLYWCH1Q4VC44 716 aa12.41□□□□□ -0.42
RNF43-201ENST00000407977 ALKBH2Q6NS38 261 aa12.41□□□□□ -0.42
RNF43-201ENST00000407977 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.41□□□□□ -0.42
RNF43-201ENST00000407977 PRRT2Q7Z6L0 340 aaPredicted RBP12.41□□□□□ -0.42
RNF43-201ENST00000407977 OR52N2Q8NGI0 321 aa12.41□□□□□ -0.42
RNF43-201ENST00000407977 INTS6Q9UL03 887 aaKnown RBP12.41□□□□□ -0.42
RNF43-201ENST00000407977 CD8B2A6NJW9 211 aa12.41□□□□□ -0.42
RNF43-201ENST00000407977 FANCGO15287 622 aa12.41□□□□□ -0.42
RNF43-201ENST00000407977 GBAP04062 536 aa12.41□□□□□ -0.42
RNF43-201ENST00000407977 CD8BP10966 210 aa12.41□□□□□ -0.42
RNF43-201ENST00000407977 DCTP40126 519 aa12.41□□□□□ -0.42
RNF43-201ENST00000407977 KCNQ1P51787 676 aa12.41□□□□□ -0.42
RNF43-201ENST00000407977 SGCBQ16585 318 aa12.41□□□□□ -0.42
RNF43-201ENST00000407977 ENPP6Q6UWR7 440 aa12.41□□□□□ -0.42
RNF43-201ENST00000407977 PRSS58Q8IYP2 241 aa12.41□□□□□ -0.42
RNF43-201ENST00000407977 SMARCD2Q92925 531 aa12.41□□□□□ -0.42
RNF43-201ENST00000407977 SLC6A7Q99884 636 aa12.41□□□□□ -0.42
RNF43-201ENST00000407977 MRPS17Q9Y2R5 130 aaKnown RBP12.41□□□□□ -0.42
RNF43-201ENST00000407977 C1orf226A1L170 272 aa12.41□□□□□ -0.42
RNF43-201ENST00000407977 RNF13O43567 381 aa12.41□□□□□ -0.42
RNF43-201ENST00000407977 RPL17P18621 184 aaKnown RBP12.41□□□□□ -0.42
RNF43-201ENST00000407977 CD9P21926 228 aa12.41□□□□□ -0.42
RNF43-201ENST00000407977 MAT2AP31153 395 aaKnown RBP12.41□□□□□ -0.42
RNF43-201ENST00000407977 SHMT2P34897 504 aa12.41□□□□□ -0.42
RNF43-201ENST00000407977 MLLT3P42568 568 aaPredicted RBP12.41□□□□□ -0.42
RNF43-201ENST00000407977 FAM69AQ5T7M9 428 aa12.41□□□□□ -0.42
RNF43-201ENST00000407977 Q6ZVU0 165 aa12.41□□□□□ -0.42
RNF43-201ENST00000407977 SLC16A9Q7RTY1 509 aa12.41□□□□□ -0.42
RNF43-201ENST00000407977 ZNF440Q8IYI8 595 aa12.41□□□□□ -0.42
RNF43-201ENST00000407977 PROKR1Q8TCW9 393 aa12.41□□□□□ -0.42
RNF43-201ENST00000407977 MINDY3Q9H8M7 445 aa12.41□□□□□ -0.42
RNF43-201ENST00000407977 BIN3Q9NQY0 253 aa12.41□□□□□ -0.42
RNF43-201ENST00000407977 VNN3Q9NY84 501 aa12.41□□□□□ -0.42
RNF43-201ENST00000407977 MEGF11A6BM72 1044 aa12.41□□□□□ -0.42
RNF43-201ENST00000407977 PFKLP17858 780 aa12.41□□□□□ -0.42
RNF43-201ENST00000407977 GNRHRP30968 328 aa12.41□□□□□ -0.42
RNF43-201ENST00000407977 ETV4P43268 484 aa12.41□□□□□ -0.42
RNF43-201ENST00000407977 NKX2-5P52952 324 aaPredicted RBP12.41□□□□□ -0.42
RNF43-201ENST00000407977 WNT4P56705 351 aa12.41□□□□□ -0.42
RNF43-201ENST00000407977 GK2Q14410 553 aaPredicted RBP12.41□□□□□ -0.42
RNF43-201ENST00000407977 ODF4Q2M2E3 257 aa12.41□□□□□ -0.42
RNF43-201ENST00000407977 METTL2BQ6P1Q9 378 aaKnown RBP12.41□□□□□ -0.42
RNF43-201ENST00000407977 KDM1BQ8NB78 822 aa12.41□□□□□ -0.42
RNF43-201ENST00000407977 PRR11Q96HE9 360 aaPredicted RBP12.41□□□□□ -0.42
RNF43-201ENST00000407977 VRK1Q99986 396 aaPredicted RBP12.41□□□□□ -0.42
RNF43-201ENST00000407977 TMEM121BQ9BXQ6 578 aaPredicted RBP12.41□□□□□ -0.42
RNF43-201ENST00000407977 MCCC2Q9HCC0 563 aa12.41□□□□□ -0.42
RNF43-201ENST00000407977 CEPT1Q9Y6K0 416 aa12.41□□□□□ -0.42
RNF43-201ENST00000407977 PIRO00625 290 aa12.4□□□□□ -0.42
RNF43-201ENST00000407977 H2BFMP0C1H6 154 aa12.4□□□□□ -0.42
RNF43-201ENST00000407977 DESI1Q6ICB0 168 aa12.4□□□□□ -0.42
RNF43-201ENST00000407977 PXKQ7Z7A4 578 aa12.4□□□□□ -0.42
RNF43-201ENST00000407977 NINJ1Q92982 152 aa12.4□□□□□ -0.42
RNF43-201ENST00000407977 RXFP3Q9NSD7 469 aa12.4□□□□□ -0.42
RNF43-201ENST00000407977 GPRC5BQ9NZH0 403 aa12.4□□□□□ -0.42
RNF43-201ENST00000407977 SCAMP2O15127 329 aaKnown RBP12.4□□□□□ -0.42
RNF43-201ENST00000407977 IFNA10P01566 189 aa12.4□□□□□ -0.42
RNF43-201ENST00000407977 KCNC1P48547 511 aa12.4□□□□□ -0.42
RNF43-201ENST00000407977 PRMT2P55345 433 aa12.4□□□□□ -0.42
RNF43-201ENST00000407977 TMEM115Q12893 351 aaPredicted RBP12.4□□□□□ -0.42
RNF43-201ENST00000407977 VEZF1Q14119 521 aa12.4□□□□□ -0.42
RNF43-201ENST00000407977 BCL2L15Q5TBC7 163 aa12.4□□□□□ -0.42
RNF43-201ENST00000407977 AGAP6Q5VW22 663 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms