RNA–Protein interactions for RNA: ENST00000403890.7

NUP43-204, Transcript of nucleoporin 43, humanhuman

TSL 2

Gene NUP43, Length 1,012 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43-204ENST00000403890 RBBP5Q15291 538 aaKnown RBP8.41□□□□□ -1.06
NUP43-204ENST00000403890 ZNF474Q6S9Z5 364 aaPredicted RBP8.41□□□□□ -1.06
NUP43-204ENST00000403890 DNM1P46Q6ZS02 220 aa8.41□□□□□ -1.06
NUP43-204ENST00000403890 C22orf34Q6ZV56 151 aa8.41□□□□□ -1.06
NUP43-204ENST00000403890 CENPUQ71F23 418 aa8.41□□□□□ -1.06
NUP43-204ENST00000403890 ZC3HAV1Q7Z2W4 902 aaKnown RBP8.41□□□□□ -1.06
NUP43-204ENST00000403890 KIAA1328Q86T90 577 aa8.41□□□□□ -1.06
NUP43-204ENST00000403890 PALM2Q8IXS6 379 aa8.41□□□□□ -1.06
NUP43-204ENST00000403890 SLC35B2Q8TB61 432 aa8.41□□□□□ -1.06
NUP43-204ENST00000403890 KCNJ9Q92806 393 aa8.41□□□□□ -1.06
NUP43-204ENST00000403890 CAVIN3Q969G5 261 aa8.41□□□□□ -1.06
NUP43-204ENST00000403890 NEIL2Q969S2 332 aa8.41□□□□□ -1.06
NUP43-204ENST00000403890 PYCR2Q96C36 320 aa8.41□□□□□ -1.06
NUP43-204ENST00000403890 STARD4Q96DR4 205 aa8.41□□□□□ -1.06
NUP43-204ENST00000403890 MFSD3Q96ES6 412 aa8.41□□□□□ -1.06
NUP43-204ENST00000403890 SENP5Q96HI0 755 aaPredicted RBP8.41□□□□□ -1.06
NUP43-204ENST00000403890 OR4K3Q96R72 315 aa8.41□□□□□ -1.06
NUP43-204ENST00000403890 KRT12Q99456 494 aa8.41□□□□□ -1.06
NUP43-204ENST00000403890 IL22Q9GZX6 179 aa8.41□□□□□ -1.06
NUP43-204ENST00000403890 AICDAQ9GZX7 198 aa8.41□□□□□ -1.06
NUP43-204ENST00000403890 CCDC68Q9H2F9 335 aa8.41□□□□□ -1.06
NUP43-204ENST00000403890 SPNS1Q9H2V7 528 aa8.41□□□□□ -1.06
NUP43-204ENST00000403890 INTS10Q9NVR2 710 aaKnown RBP8.41□□□□□ -1.06
NUP43-204ENST00000403890 ADAMTS6Q9UKP5 1117 aa8.41□□□□□ -1.06
NUP43-204ENST00000403890 C15orf41Q9Y2V0 281 aa8.41□□□□□ -1.06
NUP43-204ENST00000403890 MED16Q9Y2X0 877 aa8.41□□□□□ -1.06
NUP43-204ENST00000403890 A0A0G2JN53 185 aa8.4□□□□□ -1.06
NUP43-204ENST00000403890 SYCE3A1L190 88 aa8.4□□□□□ -1.06
NUP43-204ENST00000403890 FRG2CA6NGY1 282 aa8.4□□□□□ -1.06
NUP43-204ENST00000403890 EIF3FO00303 357 aaPredicted RBP8.4□□□□□ -1.06
NUP43-204ENST00000403890 TP53I11O14683 189 aa8.4□□□□□ -1.06
NUP43-204ENST00000403890 PGRP06401 933 aa8.4□□□□□ -1.06
NUP43-204ENST00000403890 C8GP07360 202 aa8.4□□□□□ -1.06
NUP43-204ENST00000403890 HIST1H2AGP0C0S8 130 aaPredicted RBP8.4□□□□□ -1.06
NUP43-204ENST00000403890 COX7A2P14406 83 aa8.4□□□□□ -1.06
NUP43-204ENST00000403890 PAMP19021 973 aa8.4□□□□□ -1.06
NUP43-204ENST00000403890 HIST1H2ADP20671 130 aa8.4□□□□□ -1.06
NUP43-204ENST00000403890 CFPP27918 469 aa8.4□□□□□ -1.06
NUP43-204ENST00000403890 CCKARP32238 428 aa8.4□□□□□ -1.06
NUP43-204ENST00000403890 KCNJ5P48544 419 aa8.4□□□□□ -1.06
NUP43-204ENST00000403890 NPY2RP49146 381 aa8.4□□□□□ -1.06
NUP43-204ENST00000403890 REEP5Q00765 189 aa8.4□□□□□ -1.06
NUP43-204ENST00000403890 NTRK2Q16620 822 aa8.4□□□□□ -1.06
NUP43-204ENST00000403890 TMEM249Q2WGJ8 235 aa8.4□□□□□ -1.06
NUP43-204ENST00000403890 FNDC7Q5VTL7 733 aa8.4□□□□□ -1.06
NUP43-204ENST00000403890 DUPD1Q68J44 220 aa8.4□□□□□ -1.06
NUP43-204ENST00000403890 ANKRD34AQ69YU3 496 aa8.4□□□□□ -1.06
NUP43-204ENST00000403890 ENPP6Q6UWR7 440 aa8.4□□□□□ -1.06
NUP43-204ENST00000403890 CES3Q6UWW8 571 aa8.4□□□□□ -1.06
NUP43-204ENST00000403890 C12orf54Q6X4T0 127 aa8.4□□□□□ -1.06
NUP43-204ENST00000403890 SLCO4C1Q6ZQN7 724 aa8.4□□□□□ -1.06
NUP43-204ENST00000403890 YRDCQ86U90 279 aaKnown RBP8.4□□□□□ -1.06
NUP43-204ENST00000403890 CILP2Q8IUL8 1156 aa8.4□□□□□ -1.06
NUP43-204ENST00000403890 GRAMD2AQ8IUY3 354 aa8.4□□□□□ -1.06
NUP43-204ENST00000403890 C9orf40Q8IXQ3 194 aa8.4□□□□□ -1.06
NUP43-204ENST00000403890 CPNE9Q8IYJ1 553 aa8.4□□□□□ -1.06
NUP43-204ENST00000403890 CNEP1R1Q8N9A8 125 aa8.4□□□□□ -1.06
NUP43-204ENST00000403890 OR56A3Q8NH54 315 aa8.4□□□□□ -1.06
NUP43-204ENST00000403890 SLC5A11Q8WWX8 675 aa8.4□□□□□ -1.06
NUP43-204ENST00000403890 GAL3ST3Q96A11 431 aa8.4□□□□□ -1.06
NUP43-204ENST00000403890 PGM2Q96G03 612 aa8.4□□□□□ -1.06
NUP43-204ENST00000403890 HIST1H2AHQ96KK5 128 aa8.4□□□□□ -1.06
NUP43-204ENST00000403890 RILPQ96NA2 401 aa8.4□□□□□ -1.06
NUP43-204ENST00000403890 GPR21Q99679 349 aa8.4□□□□□ -1.06
NUP43-204ENST00000403890 HIST1H2AJQ99878 128 aa8.4□□□□□ -1.06
NUP43-204ENST00000403890 AIF1LQ9BQI0 150 aa8.4□□□□□ -1.06
NUP43-204ENST00000403890 RHNO1Q9BSD3 238 aa8.4□□□□□ -1.06
NUP43-204ENST00000403890 H2AFJQ9BTM1 129 aa8.4□□□□□ -1.06
NUP43-204ENST00000403890 KIFC1Q9BW19 673 aa8.4□□□□□ -1.06
NUP43-204ENST00000403890 EIF2B3Q9NR50 452 aaKnown RBP8.4□□□□□ -1.06
NUP43-204ENST00000403890 RAB6BQ9NRW1 208 aa8.4□□□□□ -1.06
NUP43-204ENST00000403890 BFARQ9NZS9 450 aa8.4□□□□□ -1.06
NUP43-204ENST00000403890 CLCF1Q9UBD9 225 aa8.4□□□□□ -1.06
NUP43-204ENST00000403890 MAPRE3Q9UPY8 281 aa8.4□□□□□ -1.06
NUP43-204ENST00000403890 NOTCH1P46531 2555 aa8.4□□□□□ -1.07
NUP43-204ENST00000403890 CTAGE9A4FU28 777 aa8.39□□□□□ -1.07
NUP43-204ENST00000403890 BTNL10A8MVZ5 291 aa8.39□□□□□ -1.07
NUP43-204ENST00000403890 CAPN14A8MX76 684 aa8.39□□□□□ -1.07
NUP43-204ENST00000403890 ERI3O43414 337 aaKnown RBP8.39□□□□□ -1.07
NUP43-204ENST00000403890 DYRK3O43781 588 aa8.39□□□□□ -1.07
NUP43-204ENST00000403890 LDB3O75112 727 aa8.39□□□□□ -1.07
NUP43-204ENST00000403890 IFNB1P01574 187 aa8.39□□□□□ -1.07
NUP43-204ENST00000403890 IGKV3-11P04433 115 aa8.39□□□□□ -1.07
NUP43-204ENST00000403890 PTMSP20962 102 aa8.39□□□□□ -1.07
NUP43-204ENST00000403890 TBXA2RP21731 343 aa8.39□□□□□ -1.07
NUP43-204ENST00000403890 MAGEA1P43355 309 aa8.39□□□□□ -1.07
NUP43-204ENST00000403890 SLC6A12P48065 614 aa8.39□□□□□ -1.07
NUP43-204ENST00000403890 NAP1L1P55209 391 aaKnown RBP8.39□□□□□ -1.07
NUP43-204ENST00000403890 CASP9P55211 416 aa8.39□□□□□ -1.07
NUP43-204ENST00000403890 LIM2P55344 173 aa8.39□□□□□ -1.07
NUP43-204ENST00000403890 BICRALQ6AI39 1079 aa8.39□□□□□ -1.07
NUP43-204ENST00000403890 TIGD3Q6B0B8 471 aa8.39□□□□□ -1.07
NUP43-204ENST00000403890 LRRC8EQ6NSJ5 796 aa8.39□□□□□ -1.07
NUP43-204ENST00000403890 NEPROQ6NW34 567 aa8.39□□□□□ -1.07
NUP43-204ENST00000403890 ZNF549Q6P9A3 640 aa8.39□□□□□ -1.07
NUP43-204ENST00000403890 VWA1Q6PCB0 445 aa8.39□□□□□ -1.07
NUP43-204ENST00000403890 KLHDC8AQ8IYD2 350 aa8.39□□□□□ -1.07
NUP43-204ENST00000403890 C7orf57Q8NEG2 295 aa8.39□□□□□ -1.07
NUP43-204ENST00000403890 FAM83FQ8NEG4 500 aaPredicted RBP8.39□□□□□ -1.07
NUP43-204ENST00000403890 CD200R1Q8TD46 325 aa8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms