RNA–Protein interactions for RNA: ENST00000403461.5

CEACAM1-208, Transcript of carcinoembryonic antigen related cell adhesion molecule 1, human

TSL 1 (best) BASIC

Gene CEACAM1, Length 1,263 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CEACAM1-208	ENST00000403461	CYB561	P49447	251 aa		6.3	□□□□□ -1.4
CEACAM1-208	ENST00000403461	EIF3B	P55884	814 aa	Known RBP	6.3	□□□□□ -1.4
CEACAM1-208	ENST00000403461	DGCR2	P98153	550 aa		6.3	□□□□□ -1.4
CEACAM1-208	ENST00000403461	HSF1	Q00613	529 aa		6.3	□□□□□ -1.4
CEACAM1-208	ENST00000403461	ACVR1	Q04771	509 aa		6.3	□□□□□ -1.4
CEACAM1-208	ENST00000403461	PRDX1	Q06830	199 aa	Known RBP	6.3	□□□□□ -1.4
CEACAM1-208	ENST00000403461	ABRAXAS2	Q15018	415 aa		6.3	□□□□□ -1.4
CEACAM1-208	ENST00000403461	NSDHL	Q15738	373 aa		6.3	□□□□□ -1.4
CEACAM1-208	ENST00000403461	SYT16	Q17RD7	645 aa		6.3	□□□□□ -1.4
CEACAM1-208	ENST00000403461	TTLL9	Q3SXZ7	439 aa		6.3	□□□□□ -1.4
CEACAM1-208	ENST00000403461	CCSMST1	Q4G0I0	132 aa		6.3	□□□□□ -1.4
CEACAM1-208	ENST00000403461	ICE2	Q659A1	982 aa		6.3	□□□□□ -1.4
CEACAM1-208	ENST00000403461	MRNIP	Q6NTE8	343 aa		6.3	□□□□□ -1.4
CEACAM1-208	ENST00000403461	PAPD4	Q6PIY7	484 aa	Known RBP	6.3	□□□□□ -1.4
CEACAM1-208	ENST00000403461	LANCL3	Q6ZV70	420 aa		6.3	□□□□□ -1.4
CEACAM1-208	ENST00000403461	NCCRP1	Q6ZVX7	275 aa	Predicted RBP	6.3	□□□□□ -1.4
CEACAM1-208	ENST00000403461	MICALCL	Q6ZW33	695 aa		6.3	□□□□□ -1.4
CEACAM1-208	ENST00000403461	ANKRD37	Q7Z713	158 aa		6.3	□□□□□ -1.4
CEACAM1-208	ENST00000403461	CRLF3	Q8IUI8	442 aa		6.3	□□□□□ -1.4
CEACAM1-208	ENST00000403461	VSTM4	Q8IW00	320 aa		6.3	□□□□□ -1.4
CEACAM1-208	ENST00000403461	SIAH3	Q8IW03	269 aa		6.3	□□□□□ -1.4
CEACAM1-208	ENST00000403461	CAMKV	Q8NCB2	501 aa		6.3	□□□□□ -1.4
CEACAM1-208	ENST00000403461	OR9A4	Q8NGU2	314 aa		6.3	□□□□□ -1.4
CEACAM1-208	ENST00000403461	FAM57A	Q8TBR7	257 aa		6.3	□□□□□ -1.4
CEACAM1-208	ENST00000403461	LKAAEAR1	Q8TD35	194 aa		6.3	□□□□□ -1.4
CEACAM1-208	ENST00000403461	RND1	Q92730	232 aa		6.3	□□□□□ -1.4
CEACAM1-208	ENST00000403461	SIGLEC12	Q96PQ1	595 aa		6.3	□□□□□ -1.4
CEACAM1-208	ENST00000403461	OR2A5	Q96R48	311 aa		6.3	□□□□□ -1.4
CEACAM1-208	ENST00000403461	TRIM51	Q9BSJ1	452 aa		6.3	□□□□□ -1.4
CEACAM1-208	ENST00000403461	TMEM121	Q9BTD3	319 aa		6.3	□□□□□ -1.4
CEACAM1-208	ENST00000403461	FAM129A	Q9BZQ8	928 aa		6.3	□□□□□ -1.4
CEACAM1-208	ENST00000403461	TP63	Q9H3D4	680 aa	Predicted RBP	6.3	□□□□□ -1.4
CEACAM1-208	ENST00000403461	ANKH	Q9HCJ1	492 aa		6.3	□□□□□ -1.4
CEACAM1-208	ENST00000403461	ST6GALNAC1	Q9NSC7	600 aa	Predicted RBP	6.3	□□□□□ -1.4
CEACAM1-208	ENST00000403461	ABCF3	Q9NUQ8	709 aa		6.3	□□□□□ -1.4
CEACAM1-208	ENST00000403461	HCN3	Q9P1Z3	774 aa		6.3	□□□□□ -1.4
CEACAM1-208	ENST00000403461	SLC2A6	Q9UGQ3	507 aa		6.3	□□□□□ -1.4
CEACAM1-208	ENST00000403461	RUVBL2	Q9Y230	463 aa	Known RBP	6.3	□□□□□ -1.4
CEACAM1-208	ENST00000403461	COMMD10	Q9Y6G5	202 aa		6.3	□□□□□ -1.4
CEACAM1-208	ENST00000403461	ADGRG4	Q8IZF6	3080 aa		6.29	□□□□□ -1.4
CEACAM1-208	ENST00000403461		A0A0U1RQJ8	604 aa		6.29	□□□□□ -1.4
CEACAM1-208	ENST00000403461		A0A1W2PPV9	198 aa		6.29	□□□□□ -1.4
CEACAM1-208	ENST00000403461	MARCH11	A6NNE9	402 aa		6.29	□□□□□ -1.4
CEACAM1-208	ENST00000403461	ZNF785	A8K8V0	405 aa		6.29	□□□□□ -1.4
CEACAM1-208	ENST00000403461	ARHGEF33	A8MVX0	844 aa		6.29	□□□□□ -1.4
CEACAM1-208	ENST00000403461	MYO1C	O00159	1063 aa		6.29	□□□□□ -1.4
CEACAM1-208	ENST00000403461	CD3EAP	O15446	510 aa	Known RBP	6.29	□□□□□ -1.4
CEACAM1-208	ENST00000403461	GPANK1	O95872	356 aa		6.29	□□□□□ -1.4
CEACAM1-208	ENST00000403461	SYF2	O95926	243 aa	Known RBP	6.29	□□□□□ -1.4
CEACAM1-208	ENST00000403461	CHEK2	O96017	543 aa		6.29	□□□□□ -1.4
CEACAM1-208	ENST00000403461	IFNB1	P01574	187 aa		6.29	□□□□□ -1.4
CEACAM1-208	ENST00000403461	ELANE	P08246	267 aa		6.29	□□□□□ -1.4
CEACAM1-208	ENST00000403461	IGFBP2	P18065	325 aa		6.29	□□□□□ -1.4
CEACAM1-208	ENST00000403461	CHRM3	P20309	590 aa		6.29	□□□□□ -1.4
CEACAM1-208	ENST00000403461	STIP1	P31948	543 aa	Known RBP	6.29	□□□□□ -1.4
CEACAM1-208	ENST00000403461	PEX19	P40855	299 aa		6.29	□□□□□ -1.4
CEACAM1-208	ENST00000403461	PNLIPRP1	P54315	467 aa		6.29	□□□□□ -1.4
CEACAM1-208	ENST00000403461	OR4D2	P58180	307 aa		6.29	□□□□□ -1.4
CEACAM1-208	ENST00000403461	RPS15A	P62244	130 aa	Known RBP	6.29	□□□□□ -1.4
CEACAM1-208	ENST00000403461	SEMA3A	Q14563	771 aa		6.29	□□□□□ -1.4
CEACAM1-208	ENST00000403461	BEAN1	Q3B7T3	259 aa		6.29	□□□□□ -1.4
CEACAM1-208	ENST00000403461	LSM12	Q3MHD2	195 aa	Known RBP	6.29	□□□□□ -1.4
CEACAM1-208	ENST00000403461	SFT2D3	Q587I9	215 aa		6.29	□□□□□ -1.4
CEACAM1-208	ENST00000403461	PCID2	Q5JVF3	399 aa		6.29	□□□□□ -1.4
CEACAM1-208	ENST00000403461	ZNF425	Q6IV72	752 aa		6.29	□□□□□ -1.4
CEACAM1-208	ENST00000403461	NIPAL1	Q6NVV3	410 aa		6.29	□□□□□ -1.4
CEACAM1-208	ENST00000403461	H3F3C	Q6NXT2	135 aa		6.29	□□□□□ -1.4
CEACAM1-208	ENST00000403461	ARHGAP11A	Q6P4F7	1023 aa		6.29	□□□□□ -1.4
CEACAM1-208	ENST00000403461	SUSD1	Q6UWL2	747 aa		6.29	□□□□□ -1.4
CEACAM1-208	ENST00000403461	ZNF534	Q76KX8	674 aa		6.29	□□□□□ -1.4
CEACAM1-208	ENST00000403461	PCGF5	Q86SE9	256 aa		6.29	□□□□□ -1.4
CEACAM1-208	ENST00000403461	LDB1	Q86U70	411 aa	Predicted RBP	6.29	□□□□□ -1.4
CEACAM1-208	ENST00000403461	RPS19BP1	Q86WX3	136 aa	Known RBP	6.29	□□□□□ -1.4
CEACAM1-208	ENST00000403461	TGIF2LY	Q8IUE0	185 aa		6.29	□□□□□ -1.4
CEACAM1-208	ENST00000403461	CCDC170	Q8IYT3	715 aa		6.29	□□□□□ -1.4
CEACAM1-208	ENST00000403461	TMEM132C	Q8N3T6	1108 aa		6.29	□□□□□ -1.4
CEACAM1-208	ENST00000403461	CCDC89	Q8N998	374 aa		6.29	□□□□□ -1.4
CEACAM1-208	ENST00000403461	ACBD4	Q8NC06	268 aa		6.29	□□□□□ -1.4
CEACAM1-208	ENST00000403461	OR51Q1	Q8NH59	317 aa		6.29	□□□□□ -1.4
CEACAM1-208	ENST00000403461	LILRB4	Q8NHJ6	448 aa		6.29	□□□□□ -1.4
CEACAM1-208	ENST00000403461	OR1F2P	Q96R84	312 aa		6.29	□□□□□ -1.4
CEACAM1-208	ENST00000403461	HES7	Q9BYE0	225 aa		6.29	□□□□□ -1.4
CEACAM1-208	ENST00000403461	PCBD2	Q9H0N5	130 aa		6.29	□□□□□ -1.4
CEACAM1-208	ENST00000403461	P2RY12	Q9H244	342 aa		6.29	□□□□□ -1.4
CEACAM1-208	ENST00000403461	HIVEP1	P15822	2718 aa		6.29	□□□□□ -1.4
CEACAM1-208	ENST00000403461		A0A1B0GTH9	108 aa		6.28	□□□□□ -1.4
CEACAM1-208	ENST00000403461	FAM237B	A0A1B0GVD1	139 aa		6.28	□□□□□ -1.4
CEACAM1-208	ENST00000403461		A0A1W2PPL8	197 aa		6.28	□□□□□ -1.4
CEACAM1-208	ENST00000403461	NKX2-6	A6NCS4	301 aa		6.28	□□□□□ -1.4
CEACAM1-208	ENST00000403461	PABPN1L	A6NDY0	278 aa	Known RBP	6.28	□□□□□ -1.4
CEACAM1-208	ENST00000403461	TMEM200C	A6NKL6	621 aa		6.28	□□□□□ -1.4
CEACAM1-208	ENST00000403461	MAGEB17	A8MXT2	336 aa		6.28	□□□□□ -1.4
CEACAM1-208	ENST00000403461	MIF4GD	A9UHW6	222 aa	Known RBP	6.28	□□□□□ -1.4
CEACAM1-208	ENST00000403461		E7ENX8	843 aa		6.28	□□□□□ -1.4
CEACAM1-208	ENST00000403461	ADAM10	O14672	748 aa		6.28	□□□□□ -1.4
CEACAM1-208	ENST00000403461	HAT1	O14929	419 aa		6.28	□□□□□ -1.4
CEACAM1-208	ENST00000403461	P2RX6	O15547	441 aa		6.28	□□□□□ -1.4
CEACAM1-208	ENST00000403461	PHGDH	O43175	533 aa	Known RBP	6.28	□□□□□ -1.4
CEACAM1-208	ENST00000403461	ZBTB14	O43829	449 aa		6.28	□□□□□ -1.4
CEACAM1-208	ENST00000403461	NEURL1	O76050	574 aa		6.28	□□□□□ -1.4

Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms