RNA–Protein interactions for RNA: ENST00000401605.5

CLIP4-202, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

TSL 2 BASIC

Gene CLIP4, Length 2,322 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-202ENST00000401605 GDF9O60383 454 aa5.85□□□□□ -1.47
CLIP4-202ENST00000401605 STX11O75558 287 aa5.85□□□□□ -1.47
CLIP4-202ENST00000401605 BEST1O76090 585 aa5.85□□□□□ -1.47
CLIP4-202ENST00000401605 NXPH2O95156 264 aa5.85□□□□□ -1.47
CLIP4-202ENST00000401605 PNPP00491 289 aa5.85□□□□□ -1.47
CLIP4-202ENST00000401605 IFNGP01579 166 aa5.85□□□□□ -1.47
CLIP4-202ENST00000401605 TRIM49P0CI25 452 aa5.85□□□□□ -1.47
CLIP4-202ENST00000401605 TRIM49CP0CI26 452 aa5.85□□□□□ -1.47
CLIP4-202ENST00000401605 SPI1P17947 270 aa5.85□□□□□ -1.47
CLIP4-202ENST00000401605 ADORA2BP29275 332 aa5.85□□□□□ -1.47
CLIP4-202ENST00000401605 BDKRB2P30411 391 aa5.85□□□□□ -1.47
CLIP4-202ENST00000401605 FDFT1P37268 417 aa5.85□□□□□ -1.47
CLIP4-202ENST00000401605 TNFRSF4P43489 277 aa5.85□□□□□ -1.47
CLIP4-202ENST00000401605 SLC11A2P49281 568 aa5.85□□□□□ -1.47
CLIP4-202ENST00000401605 PNLIPRP1P54315 467 aa5.85□□□□□ -1.47
CLIP4-202ENST00000401605 SOX8P57073 446 aa5.85□□□□□ -1.47
CLIP4-202ENST00000401605 HERVK_113P63132 956 aa5.85□□□□□ -1.47
CLIP4-202ENST00000401605 PPP3CAQ08209 521 aa5.85□□□□□ -1.47
CLIP4-202ENST00000401605 RASGEF1BQ0VAM2 473 aa5.85□□□□□ -1.47
CLIP4-202ENST00000401605 SLC12A1Q13621 1099 aa5.85□□□□□ -1.47
CLIP4-202ENST00000401605 SF3A2Q15428 464 aaKnown RBP5.85□□□□□ -1.47
CLIP4-202ENST00000401605 TAB1Q15750 504 aa5.85□□□□□ -1.47
CLIP4-202ENST00000401605 UGT8Q16880 541 aa5.85□□□□□ -1.47
CLIP4-202ENST00000401605 RFX4Q33E94 735 aa5.85□□□□□ -1.47
CLIP4-202ENST00000401605 FLYWCH1Q4VC44 716 aa5.85□□□□□ -1.47
CLIP4-202ENST00000401605 EOGTQ5NDL2 527 aa5.85□□□□□ -1.47
CLIP4-202ENST00000401605 ZDHHC20Q5W0Z9 365 aa5.85□□□□□ -1.47
CLIP4-202ENST00000401605 RAD9BQ6WBX8 426 aa5.85□□□□□ -1.47
CLIP4-202ENST00000401605 LIPIQ6XZB0 460 aa5.85□□□□□ -1.47
CLIP4-202ENST00000401605 BHLHA15Q7RTS1 189 aaPredicted RBP5.85□□□□□ -1.47
CLIP4-202ENST00000401605 THAP5Q7Z6K1 395 aa5.85□□□□□ -1.47
CLIP4-202ENST00000401605 TMEM17Q86X19 198 aa5.85□□□□□ -1.47
CLIP4-202ENST00000401605 RCBTB1Q8NDN9 531 aa5.85□□□□□ -1.47
CLIP4-202ENST00000401605 NUDT10Q8NFP7 164 aa5.85□□□□□ -1.47
CLIP4-202ENST00000401605 ISG20Q96AZ6 181 aaKnown RBP5.85□□□□□ -1.47
CLIP4-202ENST00000401605 RGMAQ96B86 450 aa5.85□□□□□ -1.47
CLIP4-202ENST00000401605 R3HDM4Q96D70 268 aa5.85□□□□□ -1.47
CLIP4-202ENST00000401605 TSPAN17Q96FV3 270 aa5.85□□□□□ -1.47
CLIP4-202ENST00000401605 TPD52L3Q96J77 140 aa5.85□□□□□ -1.47
CLIP4-202ENST00000401605 MAPKAP1Q9BPZ7 522 aa5.85□□□□□ -1.47
CLIP4-202ENST00000401605 WDR77Q9BQA1 342 aaPredicted RBP5.85□□□□□ -1.47
CLIP4-202ENST00000401605 MFFQ9GZY8 342 aa5.85□□□□□ -1.47
CLIP4-202ENST00000401605 DUSP15Q9H1R2 295 aaPredicted RBP5.85□□□□□ -1.47
CLIP4-202ENST00000401605 PRDM13Q9H4Q3 707 aa5.85□□□□□ -1.47
CLIP4-202ENST00000401605 EXO5Q9H790 373 aa5.85□□□□□ -1.47
CLIP4-202ENST00000401605 FBXO34Q9NWN3 711 aa5.85□□□□□ -1.47
CLIP4-202ENST00000401605 GFOD1Q9NXC2 390 aa5.85□□□□□ -1.47
CLIP4-202ENST00000401605 DEC1Q9P2X7 70 aa5.85□□□□□ -1.47
CLIP4-202ENST00000401605 RNF14Q9UBS8 474 aa5.85□□□□□ -1.47
CLIP4-202ENST00000401605 KLQ9UEF7 1012 aa5.85□□□□□ -1.47
CLIP4-202ENST00000401605 KCND3Q9UK17 655 aa5.85□□□□□ -1.47
CLIP4-202ENST00000401605 SCML2Q9UQR0 700 aa5.85□□□□□ -1.47
CLIP4-202ENST00000401605 KLHL20Q9Y2M5 609 aa5.85□□□□□ -1.47
CLIP4-202ENST00000401605 NCOR2Q9Y618 2525 aa5.85□□□□□ -1.47
CLIP4-202ENST00000401605 PDCD11Q14690 1871 aaKnown RBP5.85□□□□□ -1.47
CLIP4-202ENST00000401605 A0A1B0GVM2 712 aa5.85□□□□□ -1.47
CLIP4-202ENST00000401605 A0A1W2PRB8 838 aa5.85□□□□□ -1.47
CLIP4-202ENST00000401605 C9orf170A2RU37 121 aa5.85□□□□□ -1.47
CLIP4-202ENST00000401605 PDZK1P1A8MUH7 402 aa5.85□□□□□ -1.47
CLIP4-202ENST00000401605 G3V2T6 193 aa5.85□□□□□ -1.47
CLIP4-202ENST00000401605 M0QZK8 103 aa5.85□□□□□ -1.47
CLIP4-202ENST00000401605 AURKAO14965 403 aa5.85□□□□□ -1.47
CLIP4-202ENST00000401605 PHGDHO43175 533 aaKnown RBP5.85□□□□□ -1.47
CLIP4-202ENST00000401605 SORBS2O94875 1100 aaKnown RBP5.85□□□□□ -1.47
CLIP4-202ENST00000401605 H6PDO95479 791 aa5.85□□□□□ -1.47
CLIP4-202ENST00000401605 AMY2AP04746 511 aa5.85□□□□□ -1.47
CLIP4-202ENST00000401605 ATP1A1P05023 1023 aaKnown RBP5.85□□□□□ -1.47
CLIP4-202ENST00000401605 ACADMP11310 421 aa5.85□□□□□ -1.47
CLIP4-202ENST00000401605 RNH1P13489 461 aaKnown RBP5.85□□□□□ -1.47
CLIP4-202ENST00000401605 AMY2BP19961 511 aa5.85□□□□□ -1.47
CLIP4-202ENST00000401605 ACO1P21399 889 aaKnown RBP5.85□□□□□ -1.47
CLIP4-202ENST00000401605 ABCD3P28288 659 aa5.85□□□□□ -1.47
CLIP4-202ENST00000401605 CD1BP29016 333 aa5.85□□□□□ -1.47
CLIP4-202ENST00000401605 ERP29P30040 261 aaKnown RBP5.85□□□□□ -1.47
CLIP4-202ENST00000401605 CXCR5P32302 372 aa5.85□□□□□ -1.47
CLIP4-202ENST00000401605 FOXN2P32314 431 aa5.85□□□□□ -1.47
CLIP4-202ENST00000401605 TGFBR2P37173 567 aa5.85□□□□□ -1.47
CLIP4-202ENST00000401605 MC3RP41968 323 aa5.85□□□□□ -1.47
CLIP4-202ENST00000401605 MAGEB1P43366 347 aa5.85□□□□□ -1.47
CLIP4-202ENST00000401605 KIR2DL1P43626 348 aaPredicted RBP5.85□□□□□ -1.47
CLIP4-202ENST00000401605 SLC6A11P48066 632 aa5.85□□□□□ -1.47
CLIP4-202ENST00000401605 CCR4P51679 360 aa5.85□□□□□ -1.47
CLIP4-202ENST00000401605 GPR143P51810 404 aa5.85□□□□□ -1.47
CLIP4-202ENST00000401605 SLC16A1P53985 500 aa5.85□□□□□ -1.47
CLIP4-202ENST00000401605 SUMO3P55854 103 aaPredicted RBP5.85□□□□□ -1.47
CLIP4-202ENST00000401605 SRSF11Q05519 484 aaKnown RBP5.85□□□□□ -1.47
CLIP4-202ENST00000401605 ACSM1Q08AH1 577 aa5.85□□□□□ -1.47
CLIP4-202ENST00000401605 BST2Q10589 180 aaKnown RBP5.85□□□□□ -1.47
CLIP4-202ENST00000401605 MERTKQ12866 999 aa5.85□□□□□ -1.47
CLIP4-202ENST00000401605 GAGE1Q13065 139 aa5.85□□□□□ -1.47
CLIP4-202ENST00000401605 PDK1Q15118 436 aa5.85□□□□□ -1.47
CLIP4-202ENST00000401605 POU4F3Q15319 338 aa5.85□□□□□ -1.47
CLIP4-202ENST00000401605 TRIP10Q15642 601 aa5.85□□□□□ -1.47
CLIP4-202ENST00000401605 GXYLT1Q4G148 440 aa5.85□□□□□ -1.47
CLIP4-202ENST00000401605 TAF1BQ53T94 588 aaPredicted RBP5.85□□□□□ -1.47
CLIP4-202ENST00000401605 HACD4Q5VWC8 232 aa5.85□□□□□ -1.47
CLIP4-202ENST00000401605 SLC27A4Q6P1M0 643 aa5.85□□□□□ -1.47
CLIP4-202ENST00000401605 RFWD3Q6PCD5 774 aa5.85□□□□□ -1.47
CLIP4-202ENST00000401605 CERS6Q6ZMG9 384 aa5.85□□□□□ -1.47
CLIP4-202ENST00000401605 FAM92BQ6ZTR7 304 aa5.85□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 75.7 ms