RNA–Protein interactions for RNA: ENST00000401473.7

HMGA1-204, Transcript of high mobility group AT-hook 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HMGA1, Length 1,887 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-204ENST00000401473 COX7A2P14406 83 aa14.9□□□□□ -0.02
HMGA1-204ENST00000401473 EFNA1P20827 205 aaPredicted RBP14.9□□□□□ -0.02
HMGA1-204ENST00000401473 STT3AP46977 705 aa14.9□□□□□ -0.02
HMGA1-204ENST00000401473 IMMP1LQ96LU5 166 aa14.9□□□□□ -0.02
HMGA1-204ENST00000401473 NSRP1Q9H0G5 558 aaKnown RBP14.9□□□□□ -0.02
HMGA1-204ENST00000401473 ZNF700Q9H0M5 742 aa14.9□□□□□ -0.02
HMGA1-204ENST00000401473 ZNF780BQ9Y6R6 833 aa14.9□□□□□ -0.02
HMGA1-204ENST00000401473 KMT2BQ9UMN6 2715 aaPredicted RBP14.9□□□□□ -0.02
HMGA1-204ENST00000401473 ZNF891A8MT65 544 aaPredicted RBP14.89□□□□□ -0.03
HMGA1-204ENST00000401473 MYO1GB0I1T2 1018 aa14.89□□□□□ -0.03
HMGA1-204ENST00000401473 FAM107AO95990 144 aa14.89□□□□□ -0.03
HMGA1-204ENST00000401473 CT62P0C5K7 136 aa14.89□□□□□ -0.03
HMGA1-204ENST00000401473 CSNK2A2P19784 350 aaPredicted RBP14.89□□□□□ -0.03
HMGA1-204ENST00000401473 FRKP42685 505 aaPredicted RBP14.89□□□□□ -0.03
HMGA1-204ENST00000401473 MRPL19P49406 292 aaKnown RBP14.89□□□□□ -0.03
HMGA1-204ENST00000401473 WNT3P56703 355 aa14.89□□□□□ -0.03
HMGA1-204ENST00000401473 BIKQ13323 160 aa14.89□□□□□ -0.03
HMGA1-204ENST00000401473 PGS1Q32NB8 556 aa14.89□□□□□ -0.03
HMGA1-204ENST00000401473 SPANXN4Q5MJ08 99 aa14.89□□□□□ -0.03
HMGA1-204ENST00000401473 CPTPQ5TA50 214 aa14.89□□□□□ -0.03
HMGA1-204ENST00000401473 BROXQ5VW32 411 aa14.89□□□□□ -0.03
HMGA1-204ENST00000401473 C19orf48Q6RUI8 117 aa14.89□□□□□ -0.03
HMGA1-204ENST00000401473 R3HCC1LQ7Z5L2 792 aaKnown RBP14.89□□□□□ -0.03
HMGA1-204ENST00000401473 CAMKMTQ7Z624 323 aa14.89□□□□□ -0.03
HMGA1-204ENST00000401473 MIER2Q8N344 545 aa14.89□□□□□ -0.03
HMGA1-204ENST00000401473 NFAM1Q8NET5 270 aaPredicted RBP14.89□□□□□ -0.03
HMGA1-204ENST00000401473 ADCY4Q8NFM4 1077 aa14.89□□□□□ -0.03
HMGA1-204ENST00000401473 TESCQ96BS2 214 aa14.89□□□□□ -0.03
HMGA1-204ENST00000401473 DGAT2Q96PD7 388 aa14.89□□□□□ -0.03
HMGA1-204ENST00000401473 GLIPR2Q9H4G4 154 aa14.89□□□□□ -0.03
HMGA1-204ENST00000401473 ZIM2Q9NZV7 527 aa14.89□□□□□ -0.03
HMGA1-204ENST00000401473 FBXL4Q9UKA2 621 aa14.89□□□□□ -0.03
HMGA1-204ENST00000401473 TRIM33Q9UPN9 1127 aa14.89□□□□□ -0.03
HMGA1-204ENST00000401473 SMG1Q96Q15 3661 aaKnown RBP14.89□□□□□ -0.03
HMGA1-204ENST00000401473 SPENQ96T58 3664 aaKnown RBP14.89□□□□□ -0.03
HMGA1-204ENST00000401473 PCDH17O14917 1159 aa14.89□□□□□ -0.03
HMGA1-204ENST00000401473 SCN2BO60939 215 aa14.89□□□□□ -0.03
HMGA1-204ENST00000401473 ATP1B1P05026 303 aa14.89□□□□□ -0.03
HMGA1-204ENST00000401473 HPCAL1P37235 193 aa14.89□□□□□ -0.03
HMGA1-204ENST00000401473 GPR143P51810 404 aa14.89□□□□□ -0.03
HMGA1-204ENST00000401473 DGKQP52824 942 aa14.89□□□□□ -0.03
HMGA1-204ENST00000401473 TMPRSS3P57727 454 aa14.89□□□□□ -0.03
HMGA1-204ENST00000401473 VAC14Q08AM6 782 aa14.89□□□□□ -0.03
HMGA1-204ENST00000401473 Q0VFX4 171 aa14.89□□□□□ -0.03
HMGA1-204ENST00000401473 MGAT2Q10469 447 aa14.89□□□□□ -0.03
HMGA1-204ENST00000401473 CDC20Q12834 499 aa14.89□□□□□ -0.03
HMGA1-204ENST00000401473 ELAVL1Q15717 326 aaKnown RBP14.89□□□□□ -0.03
HMGA1-204ENST00000401473 LTB4RQ15722 352 aa14.89□□□□□ -0.03
HMGA1-204ENST00000401473 PRICKLE4Q2TBC4 344 aa14.89□□□□□ -0.03
HMGA1-204ENST00000401473 FAM174BQ3ZCQ3 159 aa14.89□□□□□ -0.03
HMGA1-204ENST00000401473 OR4F3Q6IEY1 312 aa14.89□□□□□ -0.03
HMGA1-204ENST00000401473 PAPD4Q6PIY7 484 aaKnown RBP14.89□□□□□ -0.03
HMGA1-204ENST00000401473 NDUFAF7Q7L592 441 aa14.89□□□□□ -0.03
HMGA1-204ENST00000401473 ZNF551Q7Z340 670 aaPredicted RBP14.89□□□□□ -0.03
HMGA1-204ENST00000401473 RAB43Q86YS6 212 aa14.89□□□□□ -0.03
HMGA1-204ENST00000401473 FAM9CQ8IZT9 166 aa14.89□□□□□ -0.03
HMGA1-204ENST00000401473 SIMC1Q8NDZ2 872 aa14.89□□□□□ -0.03
HMGA1-204ENST00000401473 OR8J2Q8NGG1 315 aa14.89□□□□□ -0.03
HMGA1-204ENST00000401473 SNRNP27Q8WVK2 155 aaKnown RBP14.89□□□□□ -0.03
HMGA1-204ENST00000401473 AMDHD1Q96NU7 426 aa14.89□□□□□ -0.03
HMGA1-204ENST00000401473 NMUR2Q9GZQ4 415 aa14.89□□□□□ -0.03
HMGA1-204ENST00000401473 ADAP2Q9NPF8 381 aa14.89□□□□□ -0.03
HMGA1-204ENST00000401473 SAR1AQ9NR31 198 aa14.89□□□□□ -0.03
HMGA1-204ENST00000401473 CCDC167Q9P0B6 97 aa14.89□□□□□ -0.03
HMGA1-204ENST00000401473 C19orf25Q9UFG5 118 aaPredicted RBP14.89□□□□□ -0.03
HMGA1-204ENST00000401473 C17orf105B2RV13 164 aa14.88□□□□□ -0.03
HMGA1-204ENST00000401473 PCSK2P16519 638 aa14.88□□□□□ -0.03
HMGA1-204ENST00000401473 MPIP34949 423 aa14.88□□□□□ -0.03
HMGA1-204ENST00000401473 UCNP55089 124 aa14.88□□□□□ -0.03
HMGA1-204ENST00000401473 CXADRP78310 365 aa14.88□□□□□ -0.03
HMGA1-204ENST00000401473 FAM111BQ6SJ93 734 aa14.88□□□□□ -0.03
HMGA1-204ENST00000401473 LRRC25Q8N386 305 aaPredicted RBP14.88□□□□□ -0.03
HMGA1-204ENST00000401473 CPSF7Q8N684 471 aaKnown RBP14.88□□□□□ -0.03
HMGA1-204ENST00000401473 ZNF321PQ8N8H1 164 aa14.88□□□□□ -0.03
HMGA1-204ENST00000401473 THAP4Q8WY91 577 aa14.88□□□□□ -0.03
HMGA1-204ENST00000401473 RIT1Q92963 219 aa14.88□□□□□ -0.03
HMGA1-204ENST00000401473 BBS4Q96RK4 519 aa14.88□□□□□ -0.03
HMGA1-204ENST00000401473 PRPF18Q99633 342 aaKnown RBP14.88□□□□□ -0.03
HMGA1-204ENST00000401473 LPAR4Q99677 370 aa14.88□□□□□ -0.03
HMGA1-204ENST00000401473 DUSP26Q9BV47 211 aa14.88□□□□□ -0.03
HMGA1-204ENST00000401473 ANKRA2Q9H9E1 313 aa14.88□□□□□ -0.03
HMGA1-204ENST00000401473 CXorf21Q9HAI6 301 aa14.88□□□□□ -0.03
HMGA1-204ENST00000401473 ZNF160Q9HCG1 818 aa14.88□□□□□ -0.03
HMGA1-204ENST00000401473 SLC52A3Q9NQ40 469 aa14.88□□□□□ -0.03
HMGA1-204ENST00000401473 CLCA3PQ9Y6N3 262 aa14.88□□□□□ -0.03
HMGA1-204ENST00000401473 OR10H2O60403 315 aa14.87□□□□□ -0.03
HMGA1-204ENST00000401473 DDAH2O95865 285 aa14.87□□□□□ -0.03
HMGA1-204ENST00000401473 CELA2AP08217 269 aa14.87□□□□□ -0.03
HMGA1-204ENST00000401473 TNNI3P19429 210 aa14.87□□□□□ -0.03
HMGA1-204ENST00000401473 S1PR1P21453 382 aa14.87□□□□□ -0.03
HMGA1-204ENST00000401473 RPL3P39023 403 aaKnown RBP14.87□□□□□ -0.03
HMGA1-204ENST00000401473 ATP4BP51164 291 aa14.87□□□□□ -0.03
HMGA1-204ENST00000401473 NCBP2P52298 156 aaKnown RBP eCLIP14.87□□□□□ -0.03
HMGA1-204ENST00000401473 MRPS35P82673 323 aaKnown RBP14.87□□□□□ -0.03
HMGA1-204ENST00000401473 PLIN5Q00G26 463 aa14.87□□□□□ -0.03
HMGA1-204ENST00000401473 SRSF11Q05519 484 aaKnown RBP14.87□□□□□ -0.03
HMGA1-204ENST00000401473 UBAP2LQ14157 1087 aaKnown RBP14.87□□□□□ -0.03
HMGA1-204ENST00000401473 TRMT12Q53H54 448 aaKnown RBP14.87□□□□□ -0.03
HMGA1-204ENST00000401473 DCAF10Q5QP82 559 aa14.87□□□□□ -0.03
HMGA1-204ENST00000401473 ZSCAN1Q8NBB4 408 aa14.87□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms