RNA–Protein interactions for RNA: ENST00000400017.6

RPGRIP1-202, Transcript of RPGR interacting protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene RPGRIP1, Length 3,940 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPGRIP1-202ENST00000400017 GPNMBQ14956 572 aa12.81□□□□□ -0.36
RPGRIP1-202ENST00000400017 RNASE12Q5GAN4 147 aaKnown RBP12.81□□□□□ -0.36
RPGRIP1-202ENST00000400017 PAMR1Q6UXH9 720 aa12.81□□□□□ -0.36
RPGRIP1-202ENST00000400017 CCDC190Q86UF4 302 aa12.81□□□□□ -0.36
RPGRIP1-202ENST00000400017 ATP6V1C2Q8NEY4 427 aa12.81□□□□□ -0.36
RPGRIP1-202ENST00000400017 SLC35G5Q96KT7 338 aa12.81□□□□□ -0.36
RPGRIP1-202ENST00000400017 FRMD6Q96NE9 622 aa12.81□□□□□ -0.36
RPGRIP1-202ENST00000400017 THSD1Q9NS62 852 aa12.81□□□□□ -0.36
RPGRIP1-202ENST00000400017 SNTNA6NMZ2 147 aa12.8□□□□□ -0.36
RPGRIP1-202ENST00000400017 WASHC1A8K0Z3 465 aa12.8□□□□□ -0.36
RPGRIP1-202ENST00000400017 SMIM11AP58511 58 aa12.8□□□□□ -0.36
RPGRIP1-202ENST00000400017 SNRPD2P62316 118 aaKnown RBP12.8□□□□□ -0.36
RPGRIP1-202ENST00000400017 WASH2PQ6VEQ5 465 aa12.8□□□□□ -0.36
RPGRIP1-202ENST00000400017 PUM2Q8TB72 1066 aaKnown RBP eCLIP12.8□□□□□ -0.36
RPGRIP1-202ENST00000400017 RAD51AP1Q96B01 352 aa12.8□□□□□ -0.36
RPGRIP1-202ENST00000400017 TBX5Q99593 518 aa12.8□□□□□ -0.36
RPGRIP1-202ENST00000400017 AIF1LQ9BQI0 150 aa12.8□□□□□ -0.36
RPGRIP1-202ENST00000400017 CDCA4Q9BXL8 241 aa12.8□□□□□ -0.36
RPGRIP1-202ENST00000400017 TAAR2Q9P1P5 351 aa12.8□□□□□ -0.36
RPGRIP1-202ENST00000400017 IFI30P13284 250 aa12.8□□□□□ -0.36
RPGRIP1-202ENST00000400017 PSMB5P28074 263 aa12.8□□□□□ -0.36
RPGRIP1-202ENST00000400017 RPS7P62081 194 aaKnown RBP12.8□□□□□ -0.36
RPGRIP1-202ENST00000400017 PUM1Q14671 1186 aaKnown RBP eCLIP12.8□□□□□ -0.36
RPGRIP1-202ENST00000400017 MPEG1Q2M385 716 aa12.8□□□□□ -0.36
RPGRIP1-202ENST00000400017 MPP7Q5T2T1 576 aa12.8□□□□□ -0.36
RPGRIP1-202ENST00000400017 ZNF730Q6ZMV8 503 aa12.8□□□□□ -0.36
RPGRIP1-202ENST00000400017 SLC7A13Q8TCU3 470 aa12.8□□□□□ -0.36
RPGRIP1-202ENST00000400017 CXorf40BQ96DE9 158 aa12.8□□□□□ -0.36
RPGRIP1-202ENST00000400017 OR2A14Q96R47 310 aa12.8□□□□□ -0.36
RPGRIP1-202ENST00000400017 C17orf62Q9BQA9 187 aa12.8□□□□□ -0.36
RPGRIP1-202ENST00000400017 QRSL1Q9H0R6 528 aaKnown RBP12.8□□□□□ -0.36
RPGRIP1-202ENST00000400017 SRPRAP08240 638 aaKnown RBP12.8□□□□□ -0.36
RPGRIP1-202ENST00000400017 CELP19835 753 aa12.8□□□□□ -0.36
RPGRIP1-202ENST00000400017 ELAVL4P26378 380 aaKnown RBP12.8□□□□□ -0.36
RPGRIP1-202ENST00000400017 AVPR1BP47901 424 aa12.8□□□□□ -0.36
RPGRIP1-202ENST00000400017 RFX3P48380 749 aa12.8□□□□□ -0.36
RPGRIP1-202ENST00000400017 MVDP53602 400 aa12.8□□□□□ -0.36
RPGRIP1-202ENST00000400017 IFITM2Q01629 132 aa12.8□□□□□ -0.36
RPGRIP1-202ENST00000400017 ZNF33BQ06732 778 aa12.8□□□□□ -0.36
RPGRIP1-202ENST00000400017 LARS2Q15031 903 aaKnown RBP12.8□□□□□ -0.36
RPGRIP1-202ENST00000400017 ARHGAP15Q53QZ3 475 aa12.8□□□□□ -0.36
RPGRIP1-202ENST00000400017 ZNF805Q5CZA5 627 aa12.8□□□□□ -0.36
RPGRIP1-202ENST00000400017 LCN1P1Q5VSP4 162 aa12.8□□□□□ -0.36
RPGRIP1-202ENST00000400017 LIPIQ6XZB0 460 aa12.8□□□□□ -0.36
RPGRIP1-202ENST00000400017 FAM20CQ8IXL6 584 aa12.8□□□□□ -0.36
RPGRIP1-202ENST00000400017 UBQLNLQ8IYU4 475 aa12.8□□□□□ -0.36
RPGRIP1-202ENST00000400017 SREK1IP1Q8N9Q2 155 aaPredicted RBP12.8□□□□□ -0.36
RPGRIP1-202ENST00000400017 LILRB4Q8NHJ6 448 aa12.8□□□□□ -0.36
RPGRIP1-202ENST00000400017 TFGQ92734 400 aaPredicted RBP12.8□□□□□ -0.36
RPGRIP1-202ENST00000400017 KAT2AQ92830 837 aa12.8□□□□□ -0.36
RPGRIP1-202ENST00000400017 ZBED6CLQ96FA7 236 aaPredicted RBP12.8□□□□□ -0.36
RPGRIP1-202ENST00000400017 TEX12Q9BXU0 123 aa12.8□□□□□ -0.36
RPGRIP1-202ENST00000400017 CAPN10Q9HC96 672 aa12.8□□□□□ -0.36
RPGRIP1-202ENST00000400017 FAM172BPA6NC97 362 aa12.79□□□□□ -0.36
RPGRIP1-202ENST00000400017 H3BQ06 376 aaPredicted RBP12.79□□□□□ -0.36
RPGRIP1-202ENST00000400017 FAAHO00519 579 aa12.79□□□□□ -0.36
RPGRIP1-202ENST00000400017 PRKYO43930 277 aa12.79□□□□□ -0.36
RPGRIP1-202ENST00000400017 GREM1O60565 184 aa12.79□□□□□ -0.36
RPGRIP1-202ENST00000400017 EPHX1P07099 455 aa12.79□□□□□ -0.36
RPGRIP1-202ENST00000400017 ADRA2AP08913 450 aa12.79□□□□□ -0.36
RPGRIP1-202ENST00000400017 PRLHRP49683 370 aa12.79□□□□□ -0.36
RPGRIP1-202ENST00000400017 NCBP2P52298 156 aaKnown RBP eCLIP12.79□□□□□ -0.36
RPGRIP1-202ENST00000400017 C9orf64Q5T6V5 341 aa12.79□□□□□ -0.36
RPGRIP1-202ENST00000400017 FAM71E1Q6IPT2 247 aa12.79□□□□□ -0.36
RPGRIP1-202ENST00000400017 TCTN3Q6NUS6 607 aa12.79□□□□□ -0.36
RPGRIP1-202ENST00000400017 PODNL1Q6PEZ8 512 aa12.79□□□□□ -0.36
RPGRIP1-202ENST00000400017 CPXM2Q8N436 756 aa12.79□□□□□ -0.36
RPGRIP1-202ENST00000400017 SIGLEC11Q96RL6 698 aa12.79□□□□□ -0.36
RPGRIP1-202ENST00000400017 TMEM38AQ9H6F2 299 aa12.79□□□□□ -0.36
RPGRIP1-202ENST00000400017 TRIM45Q9H8W5 580 aaPredicted RBP12.79□□□□□ -0.36
RPGRIP1-202ENST00000400017 MYNNQ9NPC7 610 aa12.79□□□□□ -0.36
RPGRIP1-202ENST00000400017 KLHL1Q9NR64 748 aa12.79□□□□□ -0.36
RPGRIP1-202ENST00000400017 TBC1D24Q9ULP9 559 aa12.79□□□□□ -0.36
RPGRIP1-202ENST00000400017 RAB36O95755 333 aa12.79□□□□□ -0.36
RPGRIP1-202ENST00000400017 LSM11P83369 360 aaKnown RBP eCLIP12.79□□□□□ -0.36
RPGRIP1-202ENST00000400017 HOXC5Q00444 222 aa12.79□□□□□ -0.36
RPGRIP1-202ENST00000400017 LSRQ86X29 649 aaPredicted RBP12.79□□□□□ -0.36
RPGRIP1-202ENST00000400017 OR6F1Q8NGZ6 308 aa12.79□□□□□ -0.36
RPGRIP1-202ENST00000400017 SMPDL3AQ92484 453 aa12.79□□□□□ -0.36
RPGRIP1-202ENST00000400017 UFD1Q92890 307 aa12.79□□□□□ -0.36
RPGRIP1-202ENST00000400017 RNFT2Q96EX2 444 aa12.79□□□□□ -0.36
RPGRIP1-202ENST00000400017 TRMT61AQ96FX7 289 aaKnown RBP12.79□□□□□ -0.36
RPGRIP1-202ENST00000400017 SLC38A2Q96QD8 506 aa12.79□□□□□ -0.36
RPGRIP1-202ENST00000400017 BARHL1Q9BZE3 327 aa12.79□□□□□ -0.36
RPGRIP1-202ENST00000400017 OR51I1Q9H343 314 aa12.79□□□□□ -0.36
RPGRIP1-202ENST00000400017 MVB12BQ9H7P6 319 aa12.79□□□□□ -0.36
RPGRIP1-202ENST00000400017 TDP1Q9NUW8 608 aa12.79□□□□□ -0.36
RPGRIP1-202ENST00000400017 CUEDC1Q9NWM3 386 aaPredicted RBP12.79□□□□□ -0.36
RPGRIP1-202ENST00000400017 PTGFRNQ9P2B2 879 aa12.79□□□□□ -0.36
RPGRIP1-202ENST00000400017 FBXW2Q9UKT8 454 aa12.79□□□□□ -0.36
RPGRIP1-202ENST00000400017 HTTP42858 3142 aa12.79□□□□□ -0.36
RPGRIP1-202ENST00000400017 CPSF4LA6NMK7 179 aaKnown RBP12.79□□□□□ -0.36
RPGRIP1-202ENST00000400017 NOTOA8MTQ0 251 aa12.79□□□□□ -0.36
RPGRIP1-202ENST00000400017 NCR1O76036 304 aa12.79□□□□□ -0.36
RPGRIP1-202ENST00000400017 PCDH8O95206 1070 aa12.79□□□□□ -0.36
RPGRIP1-202ENST00000400017 METAP1P53582 386 aa12.79□□□□□ -0.36
RPGRIP1-202ENST00000400017 HENMT1Q5T8I9 393 aaKnown RBP12.79□□□□□ -0.36
RPGRIP1-202ENST00000400017 ASB18Q6ZVZ8 466 aa12.79□□□□□ -0.36
RPGRIP1-202ENST00000400017 GHDCQ8N2G8 530 aa12.79□□□□□ -0.36
RPGRIP1-202ENST00000400017 ASB15Q8WXK1 588 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms