RNA–Protein interactions for RNA: ENST00000397617.7

PTPRD-206, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 5 BASIC

Gene PTPRD, Length 8,248 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-206ENST00000397617 ANKRD34CP0C6C1 535 aa5.55□□□□□ -1.52
PTPRD-206ENST00000397617 SMIM18P0DKX4 95 aa5.55□□□□□ -1.52
PTPRD-206ENST00000397617 ARRB1P49407 418 aaPredicted RBP5.55□□□□□ -1.52
PTPRD-206ENST00000397617 RPS13P62277 151 aaKnown RBP5.55□□□□□ -1.52
PTPRD-206ENST00000397617 MFSD13AQ14CX5 517 aa5.55□□□□□ -1.52
PTPRD-206ENST00000397617 ZNF691Q5VV52 312 aa5.55□□□□□ -1.52
PTPRD-206ENST00000397617 UBE2UQ5VVX9 321 aa5.55□□□□□ -1.52
PTPRD-206ENST00000397617 OR4F3Q6IEY1 312 aa5.55□□□□□ -1.52
PTPRD-206ENST00000397617 ZNF770Q6IQ21 691 aaPredicted RBP5.55□□□□□ -1.52
PTPRD-206ENST00000397617 C1orf94Q6P1W5 598 aa5.55□□□□□ -1.52
PTPRD-206ENST00000397617 FAM124AQ86V42 546 aa5.55□□□□□ -1.52
PTPRD-206ENST00000397617 NAT14Q8WUY8 206 aa5.55□□□□□ -1.52
PTPRD-206ENST00000397617 HSH2DQ96JZ2 352 aa5.55□□□□□ -1.52
PTPRD-206ENST00000397617 ZNF426Q9BUY5 554 aa5.55□□□□□ -1.52
PTPRD-206ENST00000397617 TRIM2Q9C040 744 aa5.55□□□□□ -1.52
PTPRD-206ENST00000397617 NDUFAF4Q9P032 175 aa5.55□□□□□ -1.52
PTPRD-206ENST00000397617 SH3BP4Q9P0V3 963 aa5.55□□□□□ -1.52
PTPRD-206ENST00000397617 CES1P1Q9UKY3 287 aa5.55□□□□□ -1.52
PTPRD-206ENST00000397617 TMEM129A0AVI4 362 aa5.55□□□□□ -1.52
PTPRD-206ENST00000397617 ISPDA4D126 451 aa5.55□□□□□ -1.52
PTPRD-206ENST00000397617 BNIP3LO60238 219 aa5.55□□□□□ -1.52
PTPRD-206ENST00000397617 FADS2O95864 444 aaKnown RBP5.55□□□□□ -1.52
PTPRD-206ENST00000397617 VIPP01282 170 aa5.55□□□□□ -1.52
PTPRD-206ENST00000397617 NID1P14543 1247 aa5.55□□□□□ -1.52
PTPRD-206ENST00000397617 CD40LGP29965 261 aa5.55□□□□□ -1.52
PTPRD-206ENST00000397617 INPP1P49441 399 aa5.55□□□□□ -1.52
PTPRD-206ENST00000397617 IL10RAQ13651 578 aa5.55□□□□□ -1.52
PTPRD-206ENST00000397617 LARS2Q15031 903 aaKnown RBP5.55□□□□□ -1.52
PTPRD-206ENST00000397617 TRIM68Q6AZZ1 485 aa5.55□□□□□ -1.52
PTPRD-206ENST00000397617 HEPHL1Q6MZM0 1159 aa5.55□□□□□ -1.52
PTPRD-206ENST00000397617 C6orf120Q7Z4R8 191 aa5.55□□□□□ -1.52
PTPRD-206ENST00000397617 PYCR2Q96C36 320 aa5.55□□□□□ -1.52
PTPRD-206ENST00000397617 MNTQ99583 582 aa5.55□□□□□ -1.52
PTPRD-206ENST00000397617 DPH7Q9BTV6 452 aa5.55□□□□□ -1.52
PTPRD-206ENST00000397617 ACTRT3Q9BYD9 372 aa5.55□□□□□ -1.52
PTPRD-206ENST00000397617 WDR12Q9GZL7 423 aaKnown RBP5.55□□□□□ -1.52
PTPRD-206ENST00000397617 PILRAQ9UKJ1 303 aa5.55□□□□□ -1.52
PTPRD-206ENST00000397617 ADAMTS9Q9P2N4 1935 aa5.55□□□□□ -1.52
PTPRD-206ENST00000397617 SVILO95425 2214 aa5.55□□□□□ -1.52
PTPRD-206ENST00000397617 AGAP5A6NIR3 686 aa5.55□□□□□ -1.52
PTPRD-206ENST00000397617 BCKDKO14874 412 aa5.55□□□□□ -1.52
PTPRD-206ENST00000397617 DYRK3O43781 588 aa5.55□□□□□ -1.52
PTPRD-206ENST00000397617 CBFA2T3O75081 653 aa5.55□□□□□ -1.52
PTPRD-206ENST00000397617 PPM1BO75688 479 aa5.55□□□□□ -1.52
PTPRD-206ENST00000397617 GJB3O75712 270 aa5.55□□□□□ -1.52
PTPRD-206ENST00000397617 NKX2-2O95096 273 aa5.55□□□□□ -1.52
PTPRD-206ENST00000397617 RORAP35398 523 aa5.55□□□□□ -1.52
PTPRD-206ENST00000397617 ACTR1BP42025 376 aa5.55□□□□□ -1.52
PTPRD-206ENST00000397617 MTPNP58546 118 aa5.55□□□□□ -1.52
PTPRD-206ENST00000397617 ACTR1AP61163 376 aa5.55□□□□□ -1.52
PTPRD-206ENST00000397617 OR4C11Q6IEV9 310 aa5.55□□□□□ -1.52
PTPRD-206ENST00000397617 SPESP1Q6UW49 350 aa5.55□□□□□ -1.52
PTPRD-206ENST00000397617 NETO1Q8TDF5 533 aa5.55□□□□□ -1.52
PTPRD-206ENST00000397617 KLHDC7BQ96G42 594 aa5.55□□□□□ -1.52
PTPRD-206ENST00000397617 TCTN2Q96GX1 697 aa5.55□□□□□ -1.52
PTPRD-206ENST00000397617 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP5.55□□□□□ -1.52
PTPRD-206ENST00000397617 FNDC3AQ9Y2H6 1198 aaKnown RBP5.55□□□□□ -1.52
PTPRD-206ENST00000397617 YBX2Q9Y2T7 364 aaKnown RBP5.55□□□□□ -1.52
PTPRD-206ENST00000397617 OR5K3A6NET4 321 aa5.55□□□□□ -1.52
PTPRD-206ENST00000397617 ANGPTL1O95841 491 aa5.55□□□□□ -1.52
PTPRD-206ENST00000397617 DBIP07108 87 aaKnown RBP5.55□□□□□ -1.52
PTPRD-206ENST00000397617 H1F0P07305 194 aaKnown RBP5.55□□□□□ -1.52
PTPRD-206ENST00000397617 MLLT3P42568 568 aaPredicted RBP5.55□□□□□ -1.52
PTPRD-206ENST00000397617 GRM7Q14831 915 aa5.55□□□□□ -1.52
PTPRD-206ENST00000397617 CATSPEREQ5SY80 951 aa5.55□□□□□ -1.52
PTPRD-206ENST00000397617 C9orf50Q5SZB4 431 aa5.55□□□□□ -1.52
PTPRD-206ENST00000397617 KIAA0895LQ68EN5 471 aa5.55□□□□□ -1.52
PTPRD-206ENST00000397617 PHACTR4Q8IZ21 702 aa5.55□□□□□ -1.52
PTPRD-206ENST00000397617 LRRC25Q8N386 305 aaPredicted RBP5.55□□□□□ -1.52
PTPRD-206ENST00000397617 OR8K3Q8NH51 312 aa5.55□□□□□ -1.52
PTPRD-206ENST00000397617 ZNF354BQ96LW1 612 aa5.55□□□□□ -1.52
PTPRD-206ENST00000397617 AMDHD1Q96NU7 426 aa5.55□□□□□ -1.52
PTPRD-206ENST00000397617 ZNF576Q9H609 170 aa5.55□□□□□ -1.52
PTPRD-206ENST00000397617 FBXO8Q9NRD0 319 aa5.55□□□□□ -1.52
PTPRD-206ENST00000397617 IMPAD1Q9NX62 359 aa5.55□□□□□ -1.52
PTPRD-206ENST00000397617 SEC14L3Q9UDX4 400 aa5.55□□□□□ -1.52
PTPRD-206ENST00000397617 DUSP12Q9UNI6 340 aa5.55□□□□□ -1.52
PTPRD-206ENST00000397617 ACTL7AQ9Y615 435 aa5.55□□□□□ -1.52
PTPRD-206ENST00000397617 CHD7Q9P2D1 2997 aa5.55□□□□□ -1.52
PTPRD-206ENST00000397617 PTPRQQ9UMZ3 2332 aa5.55□□□□□ -1.52
PTPRD-206ENST00000397617 METTL12A8MUP2 240 aa5.54□□□□□ -1.52
PTPRD-206ENST00000397617 IDH3BO43837 385 aa5.54□□□□□ -1.52
PTPRD-206ENST00000397617 MFN2O95140 757 aa5.54□□□□□ -1.52
PTPRD-206ENST00000397617 FPR3P25089 353 aa5.54□□□□□ -1.52
PTPRD-206ENST00000397617 CAPZBP47756 277 aa5.54□□□□□ -1.52
PTPRD-206ENST00000397617 GALK1P51570 392 aa5.54□□□□□ -1.52
PTPRD-206ENST00000397617 NRF1Q16656 503 aa5.54□□□□□ -1.52
PTPRD-206ENST00000397617 KLHL22Q53GT1 634 aa5.54□□□□□ -1.52
PTPRD-206ENST00000397617 NDUFAF5Q5TEU4 345 aa5.54□□□□□ -1.52
PTPRD-206ENST00000397617 VN1R5Q7Z5H4 357 aa5.54□□□□□ -1.52
PTPRD-206ENST00000397617 KCTD12Q96CX2 325 aaKnown RBP5.54□□□□□ -1.52
PTPRD-206ENST00000397617 WRAP53Q9BUR4 548 aaKnown RBP5.54□□□□□ -1.52
PTPRD-206ENST00000397617 SEMA6CQ9H3T2 930 aa5.54□□□□□ -1.52
PTPRD-206ENST00000397617 IKZF5Q9H5V7 419 aa5.54□□□□□ -1.52
PTPRD-206ENST00000397617 FIS1Q9Y3D6 152 aa5.54□□□□□ -1.52
PTPRD-206ENST00000397617 ANTXRLA6NF34 631 aa5.54□□□□□ -1.52
PTPRD-206ENST00000397617 RGS10O43665 173 aa5.54□□□□□ -1.52
PTPRD-206ENST00000397617 STX11O75558 287 aa5.54□□□□□ -1.52
PTPRD-206ENST00000397617 TNFP01375 233 aa5.54□□□□□ -1.52
PTPRD-206ENST00000397617 HBQ1P09105 142 aa5.54□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms