RNA–Protein interactions for RNA: ENST00000397117.5

SEC13-209, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 5 BASIC

Gene SEC13, Length 1,603 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-209ENST00000397117 FOXM1Q08050 763 aa12.46□□□□□ -0.41
SEC13-209ENST00000397117 LRRC74AQ0VAA2 488 aa12.46□□□□□ -0.41
SEC13-209ENST00000397117 TRMT5Q32P41 509 aaKnown RBP12.46□□□□□ -0.41
SEC13-209ENST00000397117 PRMT9Q6P2P2 845 aa12.46□□□□□ -0.41
SEC13-209ENST00000397117 CYB5D1Q6P9G0 228 aa12.46□□□□□ -0.41
SEC13-209ENST00000397117 DHDDSQ86SQ9 333 aa12.46□□□□□ -0.41
SEC13-209ENST00000397117 ANKRD46Q86W74 232 aa12.46□□□□□ -0.41
SEC13-209ENST00000397117 PDSS2Q86YH6 399 aa12.46□□□□□ -0.41
SEC13-209ENST00000397117 PGAM4Q8N0Y7 254 aa12.46□□□□□ -0.41
SEC13-209ENST00000397117 ARHGEF39Q8N4T4 335 aa12.46□□□□□ -0.41
SEC13-209ENST00000397117 NATD1Q8N6N6 113 aa12.46□□□□□ -0.41
SEC13-209ENST00000397117 DNAJB8Q8NHS0 232 aa12.46□□□□□ -0.41
SEC13-209ENST00000397117 ZNF501Q96CX3 271 aaPredicted RBP12.46□□□□□ -0.41
SEC13-209ENST00000397117 LRRC58Q96CX6 371 aa12.46□□□□□ -0.41
SEC13-209ENST00000397117 HOPXQ9BPY8 73 aaPredicted RBP12.46□□□□□ -0.41
SEC13-209ENST00000397117 RASSF4Q9H2L5 321 aa12.46□□□□□ -0.41
SEC13-209ENST00000397117 CUTCQ9NTM9 273 aa12.46□□□□□ -0.41
SEC13-209ENST00000397117 EHD3Q9NZN3 535 aa12.46□□□□□ -0.41
SEC13-209ENST00000397117 DAPP1Q9UN19 280 aa12.46□□□□□ -0.41
SEC13-209ENST00000397117 PCDHA9Q9Y5H5 950 aa12.46□□□□□ -0.41
SEC13-209ENST00000397117 MRPS18BQ9Y676 258 aaKnown RBP12.46□□□□□ -0.41
SEC13-209ENST00000397117 CACNA1DQ01668 2161 aa12.46□□□□□ -0.42
SEC13-209ENST00000397117 POLR1CO15160 346 aaPredicted RBP12.45□□□□□ -0.42
SEC13-209ENST00000397117 TBX19O60806 448 aa12.45□□□□□ -0.42
SEC13-209ENST00000397117 RDH16O75452 317 aa12.45□□□□□ -0.42
SEC13-209ENST00000397117 NSA2O95478 260 aaKnown RBP12.45□□□□□ -0.42
SEC13-209ENST00000397117 ANP32DO95626 131 aa12.45□□□□□ -0.42
SEC13-209ENST00000397117 AIFM1O95831 613 aa12.45□□□□□ -0.42
SEC13-209ENST00000397117 ALAS2P22557 587 aa12.45□□□□□ -0.42
SEC13-209ENST00000397117 ARSFP54793 590 aa12.45□□□□□ -0.42
SEC13-209ENST00000397117 SNRPNP63162 240 aaKnown RBP12.45□□□□□ -0.42
SEC13-209ENST00000397117 PHC1P78364 1004 aa12.45□□□□□ -0.42
SEC13-209ENST00000397117 TNFRSF17Q02223 184 aa12.45□□□□□ -0.42
SEC13-209ENST00000397117 RUNX2Q13950 521 aa12.45□□□□□ -0.42
SEC13-209ENST00000397117 YOD1Q5VVQ6 348 aaPredicted RBP12.45□□□□□ -0.42
SEC13-209ENST00000397117 TCTN3Q6NUS6 607 aa12.45□□□□□ -0.42
SEC13-209ENST00000397117 ESX1Q8N693 406 aa12.45□□□□□ -0.42
SEC13-209ENST00000397117 FAM47BQ8NA70 645 aa12.45□□□□□ -0.42
SEC13-209ENST00000397117 GTF2H4Q92759 462 aa12.45□□□□□ -0.42
SEC13-209ENST00000397117 EXOSC8Q96B26 276 aaKnown RBP12.45□□□□□ -0.42
SEC13-209ENST00000397117 ZNF764Q96H86 408 aaPredicted RBP12.45□□□□□ -0.42
SEC13-209ENST00000397117 OR6C1Q96RD1 312 aa12.45□□□□□ -0.42
SEC13-209ENST00000397117 THTPAQ9BU02 230 aa12.45□□□□□ -0.42
SEC13-209ENST00000397117 CADM1Q9BY67 442 aaKnown RBP12.45□□□□□ -0.42
SEC13-209ENST00000397117 SLC7A5P2Q9GIP4 190 aa12.45□□□□□ -0.42
SEC13-209ENST00000397117 ENAMQ9NRM1 1142 aa12.45□□□□□ -0.42
SEC13-209ENST00000397117 SIDT1Q9NXL6 827 aaKnown RBP12.45□□□□□ -0.42
SEC13-209ENST00000397117 NDOR1Q9UHB4 597 aa12.45□□□□□ -0.42
SEC13-209ENST00000397117 UTS2RQ9UKP6 389 aa12.45□□□□□ -0.42
SEC13-209ENST00000397117 RARRES3Q9UL19 164 aa12.45□□□□□ -0.42
SEC13-209ENST00000397117 PSME2Q9UL46 239 aa12.45□□□□□ -0.42
SEC13-209ENST00000397117 PCDHGB4Q9UN71 923 aa12.45□□□□□ -0.42
SEC13-209ENST00000397117 CREBBPQ92793 2442 aa12.45□□□□□ -0.42
SEC13-209ENST00000397117 ESPL1Q14674 2120 aa12.45□□□□□ -0.42
SEC13-209ENST00000397117 ITPR2Q14571 2701 aa12.45□□□□□ -0.42
SEC13-209ENST00000397117 GLOD5A6NK44 160 aa12.44□□□□□ -0.42
SEC13-209ENST00000397117 RNASET2O00584 256 aaKnown RBP12.44□□□□□ -0.42
SEC13-209ENST00000397117 RFXANKO14593 260 aa12.44□□□□□ -0.42
SEC13-209ENST00000397117 PDPK1O15530 556 aa12.44□□□□□ -0.42
SEC13-209ENST00000397117 ERN1O75460 977 aaKnown RBP12.44□□□□□ -0.42
SEC13-209ENST00000397117 CPSF4O95639 269 aaKnown RBP12.44□□□□□ -0.42
SEC13-209ENST00000397117 NQO1P15559 274 aaKnown RBP12.44□□□□□ -0.42
SEC13-209ENST00000397117 MLLT10P55197 1068 aa12.44□□□□□ -0.42
SEC13-209ENST00000397117 WNT3P56703 355 aa12.44□□□□□ -0.42
SEC13-209ENST00000397117 KCNJ2P63252 427 aa12.44□□□□□ -0.42
SEC13-209ENST00000397117 ZNF385BQ569K4 471 aa12.44□□□□□ -0.42
SEC13-209ENST00000397117 C18orf63Q68DL7 685 aa12.44□□□□□ -0.42
SEC13-209ENST00000397117 BNC2Q6ZN30 1099 aaPredicted RBP12.44□□□□□ -0.42
SEC13-209ENST00000397117 TTLL10Q6ZVT0 673 aa12.44□□□□□ -0.42
SEC13-209ENST00000397117 ATCAYQ86WG3 371 aa12.44□□□□□ -0.42
SEC13-209ENST00000397117 C10orf67Q8IYJ2 551 aa12.44□□□□□ -0.42
SEC13-209ENST00000397117 CA13Q8N1Q1 262 aa12.44□□□□□ -0.42
SEC13-209ENST00000397117 OR5T3Q8NGG3 340 aa12.44□□□□□ -0.42
SEC13-209ENST00000397117 CIDECQ96AQ7 238 aaPredicted RBP12.44□□□□□ -0.42
SEC13-209ENST00000397117 MMABQ96EY8 250 aaPredicted RBP12.44□□□□□ -0.42
SEC13-209ENST00000397117 PANX1Q96RD7 426 aa12.44□□□□□ -0.42
SEC13-209ENST00000397117 SLC39A3Q9BRY0 314 aa12.44□□□□□ -0.42
SEC13-209ENST00000397117 MMADHCQ9H3L0 296 aaPredicted RBP12.44□□□□□ -0.42
SEC13-209ENST00000397117 CLK4Q9HAZ1 481 aaKnown RBP12.44□□□□□ -0.42
SEC13-209ENST00000397117 SPAG4Q9NPE6 437 aa12.44□□□□□ -0.42
SEC13-209ENST00000397117 GIMAP4Q9NUV9 329 aa12.44□□□□□ -0.42
SEC13-209ENST00000397117 ADA2Q9NZK5 511 aa12.44□□□□□ -0.42
SEC13-209ENST00000397117 KCMF1Q9P0J7 381 aa12.44□□□□□ -0.42
SEC13-209ENST00000397117 SLAMF8Q9P0V8 285 aa12.44□□□□□ -0.42
SEC13-209ENST00000397117 C5AR2Q9P296 337 aa12.44□□□□□ -0.42
SEC13-209ENST00000397117 NIPSNAP3AQ9UFN0 247 aaPredicted RBP12.44□□□□□ -0.42
SEC13-209ENST00000397117 BTNL2Q9UIR0 455 aa12.44□□□□□ -0.42
SEC13-209ENST00000397117 CDC14AQ9UNH5 594 aa12.44□□□□□ -0.42
SEC13-209ENST00000397117 TNRC6AQ8NDV7 1962 aaKnown RBP12.44□□□□□ -0.42
SEC13-209ENST00000397117 SHANK1Q9Y566 2161 aa12.44□□□□□ -0.42
SEC13-209ENST00000397117 A0A096LPI6 279 aa12.44□□□□□ -0.42
SEC13-209ENST00000397117 H0YIG0 161 aa12.44□□□□□ -0.42
SEC13-209ENST00000397117 H3BMH7 237 aa12.44□□□□□ -0.42
SEC13-209ENST00000397117 PGRMC2O15173 223 aa12.44□□□□□ -0.42
SEC13-209ENST00000397117 ZNF749O43361 778 aa12.44□□□□□ -0.42
SEC13-209ENST00000397117 FOXS1O43638 330 aa12.44□□□□□ -0.42
SEC13-209ENST00000397117 PRKRAO75569 313 aaKnown RBP12.44□□□□□ -0.42
SEC13-209ENST00000397117 MED26O95402 600 aa12.44□□□□□ -0.42
SEC13-209ENST00000397117 ZNF28P17035 718 aa12.44□□□□□ -0.42
SEC13-209ENST00000397117 EFNA1P20827 205 aaPredicted RBP12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms