RNA–Protein interactions for RNA: ENST00000397053.6

UPF2-203, Transcript of UPF2, regulator of nonsense mediated mRNA decay, humanhuman

APPRIS P1 TSL 5 BASIC

Gene UPF2, Length 5,369 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2-203ENST00000397053 B3GNT2Q9NY97 397 aa6.89□□□□□ -1.31
UPF2-203ENST00000397053 TAS2R1Q9NYW7 299 aa6.89□□□□□ -1.31
UPF2-203ENST00000397053 RBMX2Q9Y388 322 aaKnown RBP6.89□□□□□ -1.31
UPF2-203ENST00000397053 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP6.89□□□□□ -1.31
UPF2-203ENST00000397053 TMEM265A0A087WTH1 108 aa6.89□□□□□ -1.31
UPF2-203ENST00000397053 GXYLT2A0PJZ3 443 aa6.89□□□□□ -1.31
UPF2-203ENST00000397053 FZD9O00144 591 aa6.89□□□□□ -1.31
UPF2-203ENST00000397053 KIAA0355O15063 1070 aa6.89□□□□□ -1.31
UPF2-203ENST00000397053 CDRT1O95170 752 aa6.89□□□□□ -1.31
UPF2-203ENST00000397053 IFNA7P01567 189 aa6.89□□□□□ -1.31
UPF2-203ENST00000397053 OR12D1P0DN82 309 aa6.89□□□□□ -1.31
UPF2-203ENST00000397053 G6PDP11413 515 aa6.89□□□□□ -1.31
UPF2-203ENST00000397053 SUOXP51687 545 aa6.89□□□□□ -1.31
UPF2-203ENST00000397053 GDF10P55107 478 aa6.89□□□□□ -1.31
UPF2-203ENST00000397053 SIM1P81133 766 aaPredicted RBP6.89□□□□□ -1.31
UPF2-203ENST00000397053 IRF9Q00978 393 aa6.89□□□□□ -1.31
UPF2-203ENST00000397053 TSTQ16762 297 aaKnown RBP6.89□□□□□ -1.31
UPF2-203ENST00000397053 LRRC37A5PQ49AS3 106 aa6.89□□□□□ -1.31
UPF2-203ENST00000397053 DRICH1Q6PGQ1 229 aaPredicted RBP6.89□□□□□ -1.31
UPF2-203ENST00000397053 DCDC5Q6ZRR9 648 aa6.89□□□□□ -1.31
UPF2-203ENST00000397053 ABHD12BQ7Z5M8 362 aaPredicted RBP6.89□□□□□ -1.31
UPF2-203ENST00000397053 LRRN4CLQ8ND94 238 aa6.89□□□□□ -1.31
UPF2-203ENST00000397053 GNPDA2Q8TDQ7 276 aa6.89□□□□□ -1.31
UPF2-203ENST00000397053 C10orf82Q8WW14 230 aa6.89□□□□□ -1.31
UPF2-203ENST00000397053 C7orf34Q96L11 122 aa6.89□□□□□ -1.31
UPF2-203ENST00000397053 HS6ST2Q96MM7 605 aa6.89□□□□□ -1.31
UPF2-203ENST00000397053 PHB2Q99623 299 aa6.89□□□□□ -1.31
UPF2-203ENST00000397053 POTEKPQ9BYX7 375 aa6.89□□□□□ -1.31
UPF2-203ENST00000397053 ATG5Q9H1Y0 275 aa6.89□□□□□ -1.31
UPF2-203ENST00000397053 TMEM185BQ9H7F4 350 aa6.89□□□□□ -1.31
UPF2-203ENST00000397053 SLC2A6Q9UGQ3 507 aa6.89□□□□□ -1.31
UPF2-203ENST00000397053 SRPK3Q9UPE1 567 aa6.89□□□□□ -1.31
UPF2-203ENST00000397053 EP300Q09472 2414 aaPredicted RBP6.89□□□□□ -1.31
UPF2-203ENST00000397053 A0A0D9SEW6 157 aa6.89□□□□□ -1.31
UPF2-203ENST00000397053 BCAS2O75934 225 aaPredicted RBP6.89□□□□□ -1.31
UPF2-203ENST00000397053 CD46P15529 392 aa6.89□□□□□ -1.31
UPF2-203ENST00000397053 CKMT2P17540 419 aa6.89□□□□□ -1.31
UPF2-203ENST00000397053 NPR2P20594 1047 aa6.89□□□□□ -1.31
UPF2-203ENST00000397053 UQCRC2P22695 453 aa6.89□□□□□ -1.31
UPF2-203ENST00000397053 PYCR1P32322 319 aa6.89□□□□□ -1.31
UPF2-203ENST00000397053 RNF144AP50876 292 aaPredicted RBP6.89□□□□□ -1.31
UPF2-203ENST00000397053 SHC2P98077 582 aa6.89□□□□□ -1.31
UPF2-203ENST00000397053 MZT1Q08AG7 82 aa6.89□□□□□ -1.31
UPF2-203ENST00000397053 SLC14A2Q15849 920 aa6.89□□□□□ -1.31
UPF2-203ENST00000397053 CYBRD1Q53TN4 286 aa6.89□□□□□ -1.31
UPF2-203ENST00000397053 NCBP2-AS2Q69YL0 99 aa6.89□□□□□ -1.31
UPF2-203ENST00000397053 ZNF662Q6ZS27 426 aa6.89□□□□□ -1.31
UPF2-203ENST00000397053 TMPRSS12Q86WS5 348 aa6.89□□□□□ -1.31
UPF2-203ENST00000397053 OR2T33Q8NG76 320 aa6.89□□□□□ -1.31
UPF2-203ENST00000397053 GRPEL2Q8TAA5 225 aa6.89□□□□□ -1.31
UPF2-203ENST00000397053 STON2Q8WXE9 905 aa6.89□□□□□ -1.31
UPF2-203ENST00000397053 MAFIPQ8WZ33 124 aa6.89□□□□□ -1.31
UPF2-203ENST00000397053 KIAA1191Q96A73 305 aa6.89□□□□□ -1.31
UPF2-203ENST00000397053 HHIPQ96QV1 700 aa6.89□□□□□ -1.31
UPF2-203ENST00000397053 CDCA3Q99618 268 aaPredicted RBP6.89□□□□□ -1.31
UPF2-203ENST00000397053 WACQ9BTA9 647 aa6.89□□□□□ -1.31
UPF2-203ENST00000397053 BEX2Q9BXY8 128 aa6.89□□□□□ -1.31
UPF2-203ENST00000397053 CD244Q9BZW8 370 aa6.89□□□□□ -1.31
UPF2-203ENST00000397053 BEX1Q9HBH7 125 aa6.89□□□□□ -1.31
UPF2-203ENST00000397053 GCM1Q9NP62 436 aa6.89□□□□□ -1.31
UPF2-203ENST00000397053 ENAMQ9NRM1 1142 aa6.89□□□□□ -1.31
UPF2-203ENST00000397053 SACM1LQ9NTJ5 587 aa6.89□□□□□ -1.31
UPF2-203ENST00000397053 TMEM248Q9NWD8 314 aa6.89□□□□□ -1.31
UPF2-203ENST00000397053 SCML1Q9UN30 329 aa6.89□□□□□ -1.31
UPF2-203ENST00000397053 ZNF451Q9Y4E5 1061 aa6.89□□□□□ -1.31
UPF2-203ENST00000397053 PCDHGA8Q9Y5G5 932 aa6.89□□□□□ -1.31
UPF2-203ENST00000397053 LCKP06239 509 aa6.88□□□□□ -1.31
UPF2-203ENST00000397053 C6P13671 934 aa6.88□□□□□ -1.31
UPF2-203ENST00000397053 GTF2F2P13984 249 aa6.88□□□□□ -1.31
UPF2-203ENST00000397053 PEX2P28328 305 aa6.88□□□□□ -1.31
UPF2-203ENST00000397053 TMBIM6P55061 237 aa6.88□□□□□ -1.31
UPF2-203ENST00000397053 HSD17B12Q53GQ0 312 aa6.88□□□□□ -1.31
UPF2-203ENST00000397053 PRAMEF8Q5VWM4 474 aa6.88□□□□□ -1.31
UPF2-203ENST00000397053 PRAMEF7Q5VXH5 474 aa6.88□□□□□ -1.31
UPF2-203ENST00000397053 SLC27A4Q6P1M0 643 aa6.88□□□□□ -1.31
UPF2-203ENST00000397053 IGFN1Q86VF2 1251 aa6.88□□□□□ -1.31
UPF2-203ENST00000397053 CARM1Q86X55 608 aa6.88□□□□□ -1.31
UPF2-203ENST00000397053 TEPSINQ96N21 525 aa6.88□□□□□ -1.31
UPF2-203ENST00000397053 ACTRT3Q9BYD9 372 aa6.88□□□□□ -1.31
UPF2-203ENST00000397053 DERL2Q9GZP9 239 aa6.88□□□□□ -1.31
UPF2-203ENST00000397053 DCSTAMPQ9H295 470 aa6.88□□□□□ -1.31
UPF2-203ENST00000397053 CD320Q9NPF0 282 aa6.88□□□□□ -1.31
UPF2-203ENST00000397053 OXSMQ9NWU1 459 aa6.88□□□□□ -1.31
UPF2-203ENST00000397053 POMPQ9Y244 141 aa6.88□□□□□ -1.31
UPF2-203ENST00000397053 CARD8Q9Y2G2 431 aa6.88□□□□□ -1.31
UPF2-203ENST00000397053 VWDEQ8N2E2 1590 aa6.88□□□□□ -1.31
UPF2-203ENST00000397053 A0A0U1RQJ8 604 aa6.88□□□□□ -1.31
UPF2-203ENST00000397053 SLC22A2O15244 555 aa6.88□□□□□ -1.31
UPF2-203ENST00000397053 CREBL2O60519 120 aaPredicted RBP6.88□□□□□ -1.31
UPF2-203ENST00000397053 CREG1O75629 220 aa6.88□□□□□ -1.31
UPF2-203ENST00000397053 GSRP00390 522 aa6.88□□□□□ -1.31
UPF2-203ENST00000397053 IGHEP01854 428 aa6.88□□□□□ -1.31
UPF2-203ENST00000397053 IFNA4P05014 189 aa6.88□□□□□ -1.31
UPF2-203ENST00000397053 BMP6P22004 513 aa6.88□□□□□ -1.31
UPF2-203ENST00000397053 ROR2Q01974 943 aaKnown RBP6.88□□□□□ -1.31
UPF2-203ENST00000397053 MVKQ03426 396 aa6.88□□□□□ -1.31
UPF2-203ENST00000397053 SERTAD2Q14140 314 aa6.88□□□□□ -1.31
UPF2-203ENST00000397053 DEFB133Q30KQ1 61 aa6.88□□□□□ -1.31
UPF2-203ENST00000397053 RPL13AP3Q6NVV1 102 aa6.88□□□□□ -1.31
UPF2-203ENST00000397053 OSTM1Q86WC4 334 aa6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms