RNA–Protein interactions for RNA: ENST00000395859.2

VCPKMT-201, Transcript of valosin containing protein lysine methyltransferase, humanhuman

TSL 1 (best) BASIC

Gene VCPKMT, Length 795 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPKMT-201ENST00000395859 EXPH5Q8NEV8 1989 aa12.38□□□□□ -0.43
VCPKMT-201ENST00000395859 A0A0G2JN53 185 aa12.38□□□□□ -0.43
VCPKMT-201ENST00000395859 HRKO00198 91 aa12.38□□□□□ -0.43
VCPKMT-201ENST00000395859 NDUFS7O75251 213 aa12.38□□□□□ -0.43
VCPKMT-201ENST00000395859 SNX4O95219 450 aa12.38□□□□□ -0.43
VCPKMT-201ENST00000395859 F7P08709 466 aaPredicted RBP12.38□□□□□ -0.43
VCPKMT-201ENST00000395859 GMPRP36959 345 aa12.38□□□□□ -0.43
VCPKMT-201ENST00000395859 KIR2DL2P43627 348 aaPredicted RBP12.38□□□□□ -0.43
VCPKMT-201ENST00000395859 IGLV3-21P80748 117 aaPredicted RBP12.38□□□□□ -0.43
VCPKMT-201ENST00000395859 DHX9Q08211 1270 aaKnown RBP12.38□□□□□ -0.43
VCPKMT-201ENST00000395859 ADPRMQ3LIE5 342 aa12.38□□□□□ -0.43
VCPKMT-201ENST00000395859 DUPD1Q68J44 220 aa12.38□□□□□ -0.43
VCPKMT-201ENST00000395859 UGT3A1Q6NUS8 523 aa12.38□□□□□ -0.43
VCPKMT-201ENST00000395859 CES3Q6UWW8 571 aa12.38□□□□□ -0.43
VCPKMT-201ENST00000395859 CAND1Q86VP6 1230 aaKnown RBP12.38□□□□□ -0.43
VCPKMT-201ENST00000395859 TBC1D19Q8N5T2 526 aa12.38□□□□□ -0.43
VCPKMT-201ENST00000395859 OTUD6BQ8N6M0 293 aa12.38□□□□□ -0.43
VCPKMT-201ENST00000395859 ARIH2OSQ8N7S6 290 aa12.38□□□□□ -0.43
VCPKMT-201ENST00000395859 OR10H5Q8NGA6 315 aa12.38□□□□□ -0.43
VCPKMT-201ENST00000395859 UCN3Q969E3 161 aa12.38□□□□□ -0.43
VCPKMT-201ENST00000395859 ALKBH8Q96BT7 664 aaKnown RBP12.38□□□□□ -0.43
VCPKMT-201ENST00000395859 TRMT61AQ96FX7 289 aaKnown RBP12.38□□□□□ -0.43
VCPKMT-201ENST00000395859 TMEM41AQ96HV5 264 aa12.38□□□□□ -0.43
VCPKMT-201ENST00000395859 FAM111AQ96PZ2 611 aa12.38□□□□□ -0.43
VCPKMT-201ENST00000395859 TNFRSF13CQ96RJ3 184 aa12.38□□□□□ -0.43
VCPKMT-201ENST00000395859 IL22Q9GZX6 179 aa12.38□□□□□ -0.43
VCPKMT-201ENST00000395859 SHARPINQ9H0F6 387 aa12.38□□□□□ -0.43
VCPKMT-201ENST00000395859 OPN3Q9H1Y3 402 aaPredicted RBP12.38□□□□□ -0.43
VCPKMT-201ENST00000395859 LZTFL1Q9NQ48 299 aa12.38□□□□□ -0.43
VCPKMT-201ENST00000395859 INTS10Q9NVR2 710 aaKnown RBP12.38□□□□□ -0.43
VCPKMT-201ENST00000395859 WWOXQ9NZC7 414 aa12.38□□□□□ -0.43
VCPKMT-201ENST00000395859 COPS7AQ9UBW8 275 aa12.38□□□□□ -0.43
VCPKMT-201ENST00000395859 RYR3Q15413 4870 aa12.37□□□□□ -0.43
VCPKMT-201ENST00000395859 IGHV4-30-2A0A087WSY4 118 aa12.37□□□□□ -0.43
VCPKMT-201ENST00000395859 LRIT2A6NDA9 550 aa12.37□□□□□ -0.43
VCPKMT-201ENST00000395859 PFDN6O15212 129 aa12.37□□□□□ -0.43
VCPKMT-201ENST00000395859 OR10H2O60403 315 aa12.37□□□□□ -0.43
VCPKMT-201ENST00000395859 C8GP07360 202 aa12.37□□□□□ -0.43
VCPKMT-201ENST00000395859 POU2F1P14859 743 aa12.37□□□□□ -0.43
VCPKMT-201ENST00000395859 CDKN1AP38936 164 aa12.37□□□□□ -0.43
VCPKMT-201ENST00000395859 NAP1L1P55209 391 aaKnown RBP12.37□□□□□ -0.43
VCPKMT-201ENST00000395859 CASP9P55211 416 aa12.37□□□□□ -0.43
VCPKMT-201ENST00000395859 GFRA1P56159 465 aa12.37□□□□□ -0.43
VCPKMT-201ENST00000395859 SESN2P58004 480 aaPredicted RBP12.37□□□□□ -0.43
VCPKMT-201ENST00000395859 LOXL1Q08397 574 aaPredicted RBP12.37□□□□□ -0.43
VCPKMT-201ENST00000395859 SP140Q13342 867 aa12.37□□□□□ -0.43
VCPKMT-201ENST00000395859 SERTAD2Q14140 314 aa12.37□□□□□ -0.43
VCPKMT-201ENST00000395859 EFTUD2Q15029 972 aaKnown RBP eCLIP12.37□□□□□ -0.434e-6■■■□□ 14.8
VCPKMT-201ENST00000395859 OASLQ15646 514 aaKnown RBP12.37□□□□□ -0.43
VCPKMT-201ENST00000395859 TIGD3Q6B0B8 471 aa12.37□□□□□ -0.43
VCPKMT-201ENST00000395859 SYT10Q6XYQ8 523 aa12.37□□□□□ -0.43
VCPKMT-201ENST00000395859 DGAT2L6Q6ZPD8 337 aa12.37□□□□□ -0.43
VCPKMT-201ENST00000395859 SYCE1Q8N0S2 351 aa12.37□□□□□ -0.43
VCPKMT-201ENST00000395859 SPPL2AQ8TCT8 520 aa12.37□□□□□ -0.43
VCPKMT-201ENST00000395859 AKAP1Q92667 903 aaKnown RBP eCLIP12.37□□□□□ -0.43
VCPKMT-201ENST00000395859 DIO2Q92813 273 aa12.37□□□□□ -0.43
VCPKMT-201ENST00000395859 RUNDC3BQ96NL0 473 aa12.37□□□□□ -0.43
VCPKMT-201ENST00000395859 NAPGQ99747 312 aaPredicted RBP12.37□□□□□ -0.43
VCPKMT-201ENST00000395859 PELI2Q9HAT8 420 aa12.37□□□□□ -0.43
VCPKMT-201ENST00000395859 RNF14Q9UBS8 474 aa12.37□□□□□ -0.43
VCPKMT-201ENST00000395859 CADP27708 2225 aa12.37□□□□□ -0.43
VCPKMT-201ENST00000395859 SERINC4A6NH21 518 aa12.36□□□□□ -0.43
VCPKMT-201ENST00000395859 H0Y3Z8 333 aa12.36□□□□□ -0.43
VCPKMT-201ENST00000395859 B3GALT2O43825 422 aa12.36□□□□□ -0.43
VCPKMT-201ENST00000395859 LDB3O75112 727 aa12.36□□□□□ -0.43
VCPKMT-201ENST00000395859 SMNDC1O75940 238 aaKnown RBP eCLIP12.36□□□□□ -0.43
VCPKMT-201ENST00000395859 CLPSP04118 112 aa12.36□□□□□ -0.43
VCPKMT-201ENST00000395859 APRTP07741 180 aa12.36□□□□□ -0.43
VCPKMT-201ENST00000395859 SRD5A1P18405 259 aa12.36□□□□□ -0.43
VCPKMT-201ENST00000395859 IGFBP5P24593 272 aa12.36□□□□□ -0.43
VCPKMT-201ENST00000395859 RPL21P46778 160 aaKnown RBP12.36□□□□□ -0.43
VCPKMT-201ENST00000395859 LHX2P50458 406 aa12.36□□□□□ -0.43
VCPKMT-201ENST00000395859 RWDD2BP57060 319 aa12.36□□□□□ -0.43
VCPKMT-201ENST00000395859 STX4Q12846 297 aa12.36□□□□□ -0.43
VCPKMT-201ENST00000395859 CSHL1Q14406 222 aa12.36□□□□□ -0.43
VCPKMT-201ENST00000395859 RPS6KA2Q15349 733 aa12.36□□□□□ -0.43
VCPKMT-201ENST00000395859 GUSBP1Q15486 140 aa12.36□□□□□ -0.43
VCPKMT-201ENST00000395859 SBSNQ6UWP8 590 aa12.36□□□□□ -0.43
VCPKMT-201ENST00000395859 YRDCQ86U90 279 aaKnown RBP12.36□□□□□ -0.43
VCPKMT-201ENST00000395859 KLHDC8AQ8IYD2 350 aa12.36□□□□□ -0.43
VCPKMT-201ENST00000395859 ATL1Q8WXF7 558 aa12.36□□□□□ -0.43
VCPKMT-201ENST00000395859 PGM2Q96G03 612 aa12.36□□□□□ -0.43
VCPKMT-201ENST00000395859 RAB6BQ9NRW1 208 aa12.36□□□□□ -0.43
VCPKMT-201ENST00000395859 HEY2Q9UBP5 337 aa12.36□□□□□ -0.43
VCPKMT-201ENST00000395859 RNF112Q9ULX5 631 aa12.36□□□□□ -0.43
VCPKMT-201ENST00000395859 TFR2Q9UP52 801 aa12.36□□□□□ -0.43
VCPKMT-201ENST00000395859 MAPRE3Q9UPY8 281 aa12.36□□□□□ -0.43
VCPKMT-201ENST00000395859 MAGED1Q9Y5V3 778 aaPredicted RBP12.36□□□□□ -0.43
VCPKMT-201ENST00000395859 VWFP04275 2813 aa12.36□□□□□ -0.43
VCPKMT-201ENST00000395859 A0A0G2JK05 382 aa12.35□□□□□ -0.43
VCPKMT-201ENST00000395859 TCRBV7S2A1N4TA0A589 114 aa12.35□□□□□ -0.43
VCPKMT-201ENST00000395859 ELOA3DA6NLF2 546 aaPredicted RBP12.35□□□□□ -0.43
VCPKMT-201ENST00000395859 PLOD2O00469 737 aa12.35□□□□□ -0.43
VCPKMT-201ENST00000395859 ERI3O43414 337 aaKnown RBP12.35□□□□□ -0.43
VCPKMT-201ENST00000395859 CD8BP10966 210 aa12.35□□□□□ -0.43
VCPKMT-201ENST00000395859 TNNI3P19429 210 aa12.35□□□□□ -0.43
VCPKMT-201ENST00000395859 CERS1P27544 350 aa12.35□□□□□ -0.43
VCPKMT-201ENST00000395859 STIP1P31948 543 aaKnown RBP12.35□□□□□ -0.43
VCPKMT-201ENST00000395859 CASP3P42574 277 aa12.35□□□□□ -0.43
VCPKMT-201ENST00000395859 STT3AP46977 705 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms