RNA–Protein interactions for RNA: ENST00000395194.1

COL11A2-204, Transcript of collagen type XI alpha 2 chain, humanhuman

TSL 1 (best) BASIC

Gene COL11A2, Length 1,194 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A2-204ENST00000395194 MS4A12Q9NXJ0 267 aa17.73■□□□□ 0.43
COL11A2-204ENST00000395194 KCNN3Q9UGI6 736 aa17.73■□□□□ 0.43
COL11A2-204ENST00000395194 ZNF469Q96JG9 3925 aaPredicted RBP17.72■□□□□ 0.43
COL11A2-204ENST00000395194 IQANK1A0A1B0GTG1 560 aa17.72■□□□□ 0.43
COL11A2-204ENST00000395194 A0A1W2PS29 197 aa17.72■□□□□ 0.43
COL11A2-204ENST00000395194 LRRC3CA6NJW4 275 aa17.72■□□□□ 0.43
COL11A2-204ENST00000395194 TMPRSS11DO60235 418 aa17.72■□□□□ 0.43
COL11A2-204ENST00000395194 GBAP04062 536 aa17.72■□□□□ 0.43
COL11A2-204ENST00000395194 GFAPP14136 432 aa17.72■□□□□ 0.43
COL11A2-204ENST00000395194 CRABP2P29373 138 aa17.72■□□□□ 0.43
COL11A2-204ENST00000395194 STX2P32856 288 aa17.72■□□□□ 0.43
COL11A2-204ENST00000395194 CPSF6Q16630 551 aaKnown RBP eCLIP17.72■□□□□ 0.43
COL11A2-204ENST00000395194 PFKFB4Q16877 469 aa17.72■□□□□ 0.43
COL11A2-204ENST00000395194 MROH9Q5TGP6 573 aa17.72■□□□□ 0.43
COL11A2-204ENST00000395194 CES4AQ5XG92 561 aa17.72■□□□□ 0.43
COL11A2-204ENST00000395194 ST13P4Q8IZP2 240 aaPredicted RBP17.72■□□□□ 0.43
COL11A2-204ENST00000395194 FBXW8Q8N3Y1 598 aa17.72■□□□□ 0.43
COL11A2-204ENST00000395194 ZCCHC7Q8N3Z6 543 aaKnown RBP17.72■□□□□ 0.43
COL11A2-204ENST00000395194 TANKQ92844 425 aa17.72■□□□□ 0.43
COL11A2-204ENST00000395194 ZNF717Q9BY31 904 aaPredicted RBP17.72■□□□□ 0.43
COL11A2-204ENST00000395194 WWTR1Q9GZV5 400 aa17.72■□□□□ 0.43
COL11A2-204ENST00000395194 BOKQ9UMX3 212 aaPredicted RBP17.72■□□□□ 0.43
COL11A2-204ENST00000395194 HRNRQ86YZ3 2850 aaPredicted RBP17.72■□□□□ 0.43
COL11A2-204ENST00000395194 NF1P21359 2839 aa17.71■□□□□ 0.43
COL11A2-204ENST00000395194 PROM1O43490 865 aa17.71■□□□□ 0.43
COL11A2-204ENST00000395194 HCN1O60741 890 aa17.71■□□□□ 0.43
COL11A2-204ENST00000395194 DIAPH2O60879 1101 aa17.71■□□□□ 0.43
COL11A2-204ENST00000395194 NR2F6P10588 404 aa17.71■□□□□ 0.43
COL11A2-204ENST00000395194 PIK3CBP42338 1070 aa17.71■□□□□ 0.43
COL11A2-204ENST00000395194 NEK2P51955 445 aa17.71■□□□□ 0.43
COL11A2-204ENST00000395194 WNT3P56703 355 aa17.71■□□□□ 0.43
COL11A2-204ENST00000395194 PHEXP78562 749 aa17.71■□□□□ 0.43
COL11A2-204ENST00000395194 SETDB1Q15047 1291 aa17.71■□□□□ 0.43
COL11A2-204ENST00000395194 EBPQ15125 230 aaKnown RBP17.71■□□□□ 0.43
COL11A2-204ENST00000395194 UAP1Q16222 522 aaPredicted RBP17.71■□□□□ 0.43
COL11A2-204ENST00000395194 CYP20A1Q6UW02 462 aa17.71■□□□□ 0.43
COL11A2-204ENST00000395194 ZZZ3Q8IYH5 903 aa17.71■□□□□ 0.43
COL11A2-204ENST00000395194 RIT1Q92963 219 aa17.71■□□□□ 0.43
COL11A2-204ENST00000395194 ZFP64Q9NPA5 681 aa17.71■□□□□ 0.43
COL11A2-204ENST00000395194 SDAD1Q9NVU7 687 aaKnown RBP eCLIP17.71■□□□□ 0.43
COL11A2-204ENST00000395194 CPSF2Q9P2I0 782 aaKnown RBP17.71■□□□□ 0.43
COL11A2-204ENST00000395194 ADGRE2Q9UHX3 823 aa17.71■□□□□ 0.43
COL11A2-204ENST00000395194 ACOT9Q9Y305 439 aa17.71■□□□□ 0.43
COL11A2-204ENST00000395194 UTP11Q9Y3A2 253 aaKnown RBP17.71■□□□□ 0.43
COL11A2-204ENST00000395194 RNF11Q9Y3C5 154 aa17.71■□□□□ 0.43
COL11A2-204ENST00000395194 PCDHGA11Q9Y5H2 935 aa17.71■□□□□ 0.43
COL11A2-204ENST00000395194 CHCHD2Q9Y6H1 151 aaPredicted RBP17.71■□□□□ 0.43
COL11A2-204ENST00000395194 ACANP16112 2415 aa17.7■□□□□ 0.42
COL11A2-204ENST00000395194 A0A0A6YYD5 115 aa17.7■□□□□ 0.42
COL11A2-204ENST00000395194 A0A1W2PR48 441 aa17.7■□□□□ 0.42
COL11A2-204ENST00000395194 SYCE1LA8MT33 242 aa17.7■□□□□ 0.42
COL11A2-204ENST00000395194 KDM4EB2RXH2 506 aaPredicted RBP17.7■□□□□ 0.42
COL11A2-204ENST00000395194 SIX3O95343 332 aaPredicted RBP17.7■□□□□ 0.42
COL11A2-204ENST00000395194 GPR75O95800 540 aa17.7■□□□□ 0.42
COL11A2-204ENST00000395194 AIFM1O95831 613 aa17.7■□□□□ 0.42
COL11A2-204ENST00000395194 CLPSP04118 112 aa17.7■□□□□ 0.42
COL11A2-204ENST00000395194 C2P06681 752 aa17.7■□□□□ 0.42
COL11A2-204ENST00000395194 FBXO45P0C2W1 286 aa17.7■□□□□ 0.42
COL11A2-204ENST00000395194 GDF1P27539 372 aa17.7■□□□□ 0.42
COL11A2-204ENST00000395194 SSTR4P31391 388 aa17.7■□□□□ 0.42
COL11A2-204ENST00000395194 BSGP35613 385 aa17.7■□□□□ 0.42
COL11A2-204ENST00000395194 ARL1P40616 181 aaPredicted RBP17.7■□□□□ 0.42
COL11A2-204ENST00000395194 SLC37A1P57057 533 aa17.7■□□□□ 0.42
COL11A2-204ENST00000395194 PCDH1Q08174 1060 aa17.7■□□□□ 0.42
COL11A2-204ENST00000395194 GTF2H2Q13888 395 aa17.7■□□□□ 0.42
COL11A2-204ENST00000395194 SPRED3Q2MJR0 410 aa17.7■□□□□ 0.42
COL11A2-204ENST00000395194 BICRALQ6AI39 1079 aa17.7■□□□□ 0.42
COL11A2-204ENST00000395194 GTF2H2CQ6P1K8 395 aa17.7■□□□□ 0.42
COL11A2-204ENST00000395194 ZDHHC24Q6UX98 284 aa17.7■□□□□ 0.42
COL11A2-204ENST00000395194 GOLGA7Q7Z5G4 137 aa17.7■□□□□ 0.42
COL11A2-204ENST00000395194 LIX1Q8N485 282 aa17.7■□□□□ 0.42
COL11A2-204ENST00000395194 DOHHQ9BU89 302 aa17.7■□□□□ 0.42
COL11A2-204ENST00000395194 SNX15Q9NRS6 342 aa17.7■□□□□ 0.42
COL11A2-204ENST00000395194 LYARQ9NX58 379 aaKnown RBP17.7■□□□□ 0.42
COL11A2-204ENST00000395194 CNOT11Q9UKZ1 510 aaKnown RBP17.7■□□□□ 0.42
COL11A2-204ENST00000395194 L3MBTL1Q9Y468 752 aa17.7■□□□□ 0.42
COL11A2-204ENST00000395194 ASB4Q9Y574 426 aa17.7■□□□□ 0.42
COL11A2-204ENST00000395194 DOCK7Q96N67 2140 aa17.69■□□□□ 0.42
COL11A2-204ENST00000395194 FAM58BPP0C7Q3 252 aa17.69■□□□□ 0.42
COL11A2-204ENST00000395194 PTX3P26022 381 aaPredicted RBP17.69■□□□□ 0.42
COL11A2-204ENST00000395194 SERPINB3P29508 390 aa17.69■□□□□ 0.42
COL11A2-204ENST00000395194 DNAJA1P31689 397 aaKnown RBP17.69■□□□□ 0.42
COL11A2-204ENST00000395194 FBXW4P57775 412 aa17.69■□□□□ 0.42
COL11A2-204ENST00000395194 LIPJQ5W064 366 aa17.69■□□□□ 0.42
COL11A2-204ENST00000395194 MRM1Q6IN84 353 aaKnown RBP17.69■□□□□ 0.42
COL11A2-204ENST00000395194 LRRC25Q8N386 305 aaPredicted RBP17.69■□□□□ 0.42
COL11A2-204ENST00000395194 SLC15A4Q8N697 577 aa17.69■□□□□ 0.42
COL11A2-204ENST00000395194 C7orf57Q8NEG2 295 aa17.69■□□□□ 0.42
COL11A2-204ENST00000395194 DIO2Q92813 273 aa17.69■□□□□ 0.42
COL11A2-204ENST00000395194 CDK15Q96Q40 435 aa17.69■□□□□ 0.42
COL11A2-204ENST00000395194 PELOQ9BRX2 385 aaKnown RBP17.69■□□□□ 0.42
COL11A2-204ENST00000395194 IPPKQ9H8X2 491 aa17.69■□□□□ 0.42
COL11A2-204ENST00000395194 CNIH4Q9P003 139 aa17.69■□□□□ 0.42
COL11A2-204ENST00000395194 A0A087X1B8 175 aa17.68■□□□□ 0.42
COL11A2-204ENST00000395194 C15orf38-AP3S2A0A0A6YYH1 394 aa17.68■□□□□ 0.42
COL11A2-204ENST00000395194 ESYT3A0FGR9 886 aa17.68■□□□□ 0.42
COL11A2-204ENST00000395194 H0YIV9 168 aa17.68■□□□□ 0.42
COL11A2-204ENST00000395194 GABRA1P14867 456 aa17.68■□□□□ 0.42
COL11A2-204ENST00000395194 UQCRC1P31930 480 aa17.68■□□□□ 0.42
COL11A2-204ENST00000395194 ALDH18A1P54886 795 aaKnown RBP17.68■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms