RNA–Protein interactions for RNA: ENST00000394925.5

TRAF4-203, Transcript of TNF receptor associated factor 4, humanhuman

TSL 2

Gene TRAF4, Length 702 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-203ENST00000394925 BIKQ13323 160 aa19.38■□□□□ 0.69
TRAF4-203ENST00000394925 ZNF267Q14586 743 aaPredicted RBP19.38■□□□□ 0.69
TRAF4-203ENST00000394925 TMEM198Q66K66 360 aa19.38■□□□□ 0.69
TRAF4-203ENST00000394925 C18orf63Q68DL7 685 aa19.38■□□□□ 0.69
TRAF4-203ENST00000394925 OR4C11Q6IEV9 310 aa19.38■□□□□ 0.69
TRAF4-203ENST00000394925 MED27Q6P2C8 311 aa19.38■□□□□ 0.69
TRAF4-203ENST00000394925 RNF111Q6ZNA4 994 aa19.38■□□□□ 0.69
TRAF4-203ENST00000394925 LACC1Q8IV20 430 aa19.38■□□□□ 0.69
TRAF4-203ENST00000394925 PDPRQ8NCN5 879 aa19.38■□□□□ 0.69
TRAF4-203ENST00000394925 DIO2Q92813 273 aa19.38■□□□□ 0.69
TRAF4-203ENST00000394925 TANKQ92844 425 aa19.38■□□□□ 0.69
TRAF4-203ENST00000394925 UBE2E3Q969T4 207 aa19.38■□□□□ 0.69
TRAF4-203ENST00000394925 ZNF597Q96LX8 424 aa19.38■□□□□ 0.69
TRAF4-203ENST00000394925 TIMP4Q99727 224 aa19.38■□□□□ 0.69
TRAF4-203ENST00000394925 SMR3AQ99954 134 aa19.38■□□□□ 0.69
TRAF4-203ENST00000394925 WWTR1Q9GZV5 400 aa19.38■□□□□ 0.69
TRAF4-203ENST00000394925 EPB41L4BQ9H329 900 aa19.38■□□□□ 0.69
TRAF4-203ENST00000394925 SMYD2Q9NRG4 433 aa19.38■□□□□ 0.69
TRAF4-203ENST00000394925 CES2O00748 559 aa19.37■□□□□ 0.69
TRAF4-203ENST00000394925 S100BP04271 92 aaPredicted RBP19.37■□□□□ 0.69
TRAF4-203ENST00000394925 CASP2P42575 452 aa19.37■□□□□ 0.69
TRAF4-203ENST00000394925 AGFG1P52594 562 aaKnown RBP19.37■□□□□ 0.69
TRAF4-203ENST00000394925 ATP6V0D1P61421 351 aa19.37■□□□□ 0.69
TRAF4-203ENST00000394925 NTRK2Q16620 822 aa19.37■□□□□ 0.69
TRAF4-203ENST00000394925 DEPDC1Q5TB30 811 aa19.37■□□□□ 0.69
TRAF4-203ENST00000394925 KHDRBS2Q5VWX1 349 aaKnown RBP19.37■□□□□ 0.69
TRAF4-203ENST00000394925 CAPN12Q6ZSI9 719 aa19.37■□□□□ 0.69
TRAF4-203ENST00000394925 BIVMQ86UB2 503 aa19.37■□□□□ 0.69
TRAF4-203ENST00000394925 GPR180Q86V85 440 aa19.37■□□□□ 0.69
TRAF4-203ENST00000394925 KIF18BQ86Y91 864 aa19.37■□□□□ 0.69
TRAF4-203ENST00000394925 KLHL7Q8IXQ5 586 aa19.37■□□□□ 0.69
TRAF4-203ENST00000394925 LAS2Q8IYD9 372 aa19.37■□□□□ 0.69
TRAF4-203ENST00000394925 ST13P4Q8IZP2 240 aaPredicted RBP19.37■□□□□ 0.69
TRAF4-203ENST00000394925 RNF175Q8N4F7 328 aa19.37■□□□□ 0.69
TRAF4-203ENST00000394925 OR7G3Q8NG95 312 aa19.37■□□□□ 0.69
TRAF4-203ENST00000394925 LINC01560Q8TB33 94 aa19.37■□□□□ 0.69
TRAF4-203ENST00000394925 HSPBAP1Q96EW2 488 aa19.37■□□□□ 0.69
TRAF4-203ENST00000394925 TSPAN17Q96FV3 270 aa19.37■□□□□ 0.69
TRAF4-203ENST00000394925 CMTM7Q96FZ5 175 aa19.37■□□□□ 0.69
TRAF4-203ENST00000394925 CD244Q9BZW8 370 aa19.37■□□□□ 0.69
TRAF4-203ENST00000394925 MS4A12Q9NXJ0 267 aa19.37■□□□□ 0.69
TRAF4-203ENST00000394925 CAMK2AQ9UQM7 478 aa19.37■□□□□ 0.69
TRAF4-203ENST00000394925 TRIM3O75382 744 aaPredicted RBP19.36■□□□□ 0.69
TRAF4-203ENST00000394925 ACSL3O95573 720 aa19.36■□□□□ 0.69
TRAF4-203ENST00000394925 TLX1P31314 330 aaPredicted RBP19.36■□□□□ 0.69
TRAF4-203ENST00000394925 RAP1GDS1P52306 607 aa19.36■□□□□ 0.69
TRAF4-203ENST00000394925 SLC37A1P57057 533 aa19.36■□□□□ 0.69
TRAF4-203ENST00000394925 TNFRSF17Q02223 184 aa19.36■□□□□ 0.69
TRAF4-203ENST00000394925 DDX39BQ13838 428 aaKnown RBP19.36■□□□□ 0.69
TRAF4-203ENST00000394925 EBPQ15125 230 aaKnown RBP19.36■□□□□ 0.69
TRAF4-203ENST00000394925 TMEM64Q6YI46 380 aa19.36■□□□□ 0.69
TRAF4-203ENST00000394925 SYDE1Q6ZW31 735 aaPredicted RBP19.36■□□□□ 0.69
TRAF4-203ENST00000394925 LRRC70Q7Z2Q7 622 aa19.36■□□□□ 0.69
TRAF4-203ENST00000394925 RGMAQ96B86 450 aa19.36■□□□□ 0.69
TRAF4-203ENST00000394925 PHF11Q9UIL8 331 aa19.36■□□□□ 0.69
TRAF4-203ENST00000394925 RNF112Q9ULX5 631 aa19.36■□□□□ 0.69
TRAF4-203ENST00000394925 SLC6A5Q9Y345 797 aa19.36■□□□□ 0.69
TRAF4-203ENST00000394925 WASHC1A8K0Z3 465 aa19.35■□□□□ 0.69
TRAF4-203ENST00000394925 OR10H2O60403 315 aa19.35■□□□□ 0.69
TRAF4-203ENST00000394925 HNRNPH2P55795 449 aaKnown RBP19.35■□□□□ 0.69
TRAF4-203ENST00000394925 DR1Q01658 176 aa19.35■□□□□ 0.69
TRAF4-203ENST00000394925 E2F2Q14209 437 aa19.35■□□□□ 0.69
TRAF4-203ENST00000394925 SPRED3Q2MJR0 410 aa19.35■□□□□ 0.69
TRAF4-203ENST00000394925 TBCELQ5QJ74 424 aa19.35■□□□□ 0.69
TRAF4-203ENST00000394925 NSUN5P2Q63ZY6 315 aa19.35■□□□□ 0.69
TRAF4-203ENST00000394925 BICRALQ6AI39 1079 aa19.35■□□□□ 0.69
TRAF4-203ENST00000394925 PM20D2Q8IYS1 436 aa19.35■□□□□ 0.69
TRAF4-203ENST00000394925 TAGAPQ8N103 731 aa19.35■□□□□ 0.69
TRAF4-203ENST00000394925 RIT1Q92963 219 aa19.35■□□□□ 0.69
TRAF4-203ENST00000394925 DOCK7Q96N67 2140 aa19.35■□□□□ 0.69
TRAF4-203ENST00000394925 TRIB1Q96RU8 372 aa19.35■□□□□ 0.69
TRAF4-203ENST00000394925 TRIM31Q9BZY9 425 aa19.35■□□□□ 0.69
TRAF4-203ENST00000394925 PRDM14Q9GZV8 571 aa19.35■□□□□ 0.69
TRAF4-203ENST00000394925 PLEKHF2Q9H8W4 249 aa19.35■□□□□ 0.69
TRAF4-203ENST00000394925 MED12Q93074 2177 aa19.34■□□□□ 0.69
TRAF4-203ENST00000394925 ANKRD33BA6NCL7 494 aa19.34■□□□□ 0.69
TRAF4-203ENST00000394925 EEF1E1-BLOC1S5C9J1V9 151 aa19.34■□□□□ 0.69
TRAF4-203ENST00000394925 PLPP1O14494 284 aa19.34■□□□□ 0.69
TRAF4-203ENST00000394925 TP53I11O14683 189 aa19.34■□□□□ 0.69
TRAF4-203ENST00000394925 EEF1E1O43324 174 aaKnown RBP19.34■□□□□ 0.69
TRAF4-203ENST00000394925 SEC31AO94979 1220 aaKnown RBP19.34■□□□□ 0.69
TRAF4-203ENST00000394925 GPR75O95800 540 aa19.34■□□□□ 0.69
TRAF4-203ENST00000394925 STMN1P16949 149 aa19.34■□□□□ 0.69
TRAF4-203ENST00000394925 SERPINB1P30740 379 aa19.34■□□□□ 0.69
TRAF4-203ENST00000394925 GMPRP36959 345 aa19.34■□□□□ 0.69
TRAF4-203ENST00000394925 RPL21P46778 160 aaKnown RBP19.34■□□□□ 0.69
TRAF4-203ENST00000394925 CDK9P50750 372 aaKnown RBP19.34■□□□□ 0.69
TRAF4-203ENST00000394925 FBXW4P57775 412 aa19.34■□□□□ 0.69
TRAF4-203ENST00000394925 SF3B4Q15427 424 aaKnown RBP eCLIP19.34■□□□□ 0.699e-7■■■□□ 17.6
TRAF4-203ENST00000394925 ZBED8Q8IZ13 594 aa19.34■□□□□ 0.69
TRAF4-203ENST00000394925 C18orf12Q96KH6 178 aa19.34■□□□□ 0.69
TRAF4-203ENST00000394925 RILPQ96NA2 401 aa19.34■□□□□ 0.69
TRAF4-203ENST00000394925 PELOQ9BRX2 385 aaKnown RBP19.34■□□□□ 0.69
TRAF4-203ENST00000394925 A0A1B0GTL3 188 aa19.33■□□□□ 0.68
TRAF4-203ENST00000394925 GLOD5A6NK44 160 aa19.33■□□□□ 0.68
TRAF4-203ENST00000394925 OR6C76A6NM76 312 aa19.33■□□□□ 0.68
TRAF4-203ENST00000394925 CLCA1A8K7I4 914 aa19.33■□□□□ 0.68
TRAF4-203ENST00000394925 CXorf49A8MYA2 514 aaPredicted RBP19.33■□□□□ 0.68
TRAF4-203ENST00000394925 E7ESA3 106 aa19.33■□□□□ 0.68
TRAF4-203ENST00000394925 TP73O15350 636 aa19.33■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms