RNA–Protein interactions for RNA: ENST00000394892.2

ATG4A-205, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 3

Gene ATG4A, Length 935 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-205ENST00000394892 PRSS53Q2L4Q9 553 aa8.17□□□□□ -1.1
ATG4A-205ENST00000394892 MPEG1Q2M385 716 aa8.17□□□□□ -1.1
ATG4A-205ENST00000394892 SPRED3Q2MJR0 410 aa8.17□□□□□ -1.1
ATG4A-205ENST00000394892 GGTA1PQ4G0N0 100 aa8.17□□□□□ -1.1
ATG4A-205ENST00000394892 SGO1Q5FBB7 561 aa8.17□□□□□ -1.1
ATG4A-205ENST00000394892 DESI1Q6ICB0 168 aa8.17□□□□□ -1.1
ATG4A-205ENST00000394892 KLC3Q6P597 504 aa8.17□□□□□ -1.1
ATG4A-205ENST00000394892 ST13P4Q8IZP2 240 aaPredicted RBP8.17□□□□□ -1.1
ATG4A-205ENST00000394892 METTL4Q8N3J2 472 aa8.17□□□□□ -1.1
ATG4A-205ENST00000394892 TMEM251Q8N6I4 163 aa8.17□□□□□ -1.1
ATG4A-205ENST00000394892 ZNF615Q8N8J6 731 aa8.17□□□□□ -1.1
ATG4A-205ENST00000394892 POGLUT1Q8NBL1 392 aa8.17□□□□□ -1.1
ATG4A-205ENST00000394892 MNS1Q8NEH6 495 aa8.17□□□□□ -1.1
ATG4A-205ENST00000394892 NUBPLQ8TB37 319 aa8.17□□□□□ -1.1
ATG4A-205ENST00000394892 FAM57AQ8TBR7 257 aa8.17□□□□□ -1.1
ATG4A-205ENST00000394892 ASB15Q8WXK1 588 aa8.17□□□□□ -1.1
ATG4A-205ENST00000394892 TMEM125Q96AQ2 219 aa8.17□□□□□ -1.1
ATG4A-205ENST00000394892 TM4SF18Q96CE8 201 aa8.17□□□□□ -1.1
ATG4A-205ENST00000394892 FBXL20Q96IG2 436 aa8.17□□□□□ -1.1
ATG4A-205ENST00000394892 MAGED4Q96JG8 741 aa8.17□□□□□ -1.1
ATG4A-205ENST00000394892 TMEM237Q96Q45 408 aa8.17□□□□□ -1.1
ATG4A-205ENST00000394892 HBEGFQ99075 208 aa8.17□□□□□ -1.1
ATG4A-205ENST00000394892 CCDC77Q9BR77 488 aa8.17□□□□□ -1.1
ATG4A-205ENST00000394892 ERVK-6Q9BXR3 956 aa8.17□□□□□ -1.1
ATG4A-205ENST00000394892 TTTY12Q9BZ98 90 aa8.17□□□□□ -1.1
ATG4A-205ENST00000394892 MRPL46Q9H2W6 279 aaKnown RBP8.17□□□□□ -1.1
ATG4A-205ENST00000394892 CXorf21Q9HAI6 301 aa8.17□□□□□ -1.1
ATG4A-205ENST00000394892 TNFRSF12AQ9NP84 129 aa8.17□□□□□ -1.1
ATG4A-205ENST00000394892 TIMMDC1Q9NPL8 285 aa8.17□□□□□ -1.1
ATG4A-205ENST00000394892 HPF1Q9NWY4 346 aa8.17□□□□□ -1.1
ATG4A-205ENST00000394892 LYARQ9NX58 379 aaKnown RBP8.17□□□□□ -1.1
ATG4A-205ENST00000394892 TNFRSF10DQ9UBN6 386 aa8.17□□□□□ -1.1
ATG4A-205ENST00000394892 PHF11Q9UIL8 331 aa8.17□□□□□ -1.1
ATG4A-205ENST00000394892 ERVK-11Q9UQG0 969 aa8.17□□□□□ -1.1
ATG4A-205ENST00000394892 ERVK-19Q9WJR5 959 aa8.17□□□□□ -1.1
ATG4A-205ENST00000394892 DTX4Q9Y2E6 619 aa8.17□□□□□ -1.1
ATG4A-205ENST00000394892 CHCHD2Q9Y6H1 151 aaPredicted RBP8.17□□□□□ -1.1
ATG4A-205ENST00000394892 AKAP9Q99996 3911 aa8.17□□□□□ -1.1
ATG4A-205ENST00000394892 PDZD2O15018 2839 aa8.16□□□□□ -1.1
ATG4A-205ENST00000394892 EXOC1LA0A1B0GW35 172 aa8.16□□□□□ -1.1
ATG4A-205ENST00000394892 A0A1W2PPM1 405 aa8.16□□□□□ -1.1
ATG4A-205ENST00000394892 E9PLN8 166 aa8.16□□□□□ -1.1
ATG4A-205ENST00000394892 KLRC4-KLRK1H3BQV0 150 aa8.16□□□□□ -1.1
ATG4A-205ENST00000394892 GOLGA8RI6L899 631 aa8.16□□□□□ -1.1
ATG4A-205ENST00000394892 UBFD1O14562 309 aaKnown RBP8.16□□□□□ -1.1
ATG4A-205ENST00000394892 TFECO14948 347 aaPredicted RBP8.16□□□□□ -1.1
ATG4A-205ENST00000394892 NME6O75414 186 aaPredicted RBP8.16□□□□□ -1.1
ATG4A-205ENST00000394892 OR4F21O95013 312 aa8.16□□□□□ -1.1
ATG4A-205ENST00000394892 IGHG3P01860 377 aa8.16□□□□□ -1.1
ATG4A-205ENST00000394892 SHBGP04278 402 aa8.16□□□□□ -1.1
ATG4A-205ENST00000394892 RHOXF2BP0C7M4 288 aa8.16□□□□□ -1.1
ATG4A-205ENST00000394892 SLC35E2P0CK97 266 aa8.16□□□□□ -1.1
ATG4A-205ENST00000394892 ABOP16442 354 aa8.16□□□□□ -1.1
ATG4A-205ENST00000394892 CNR1P21554 472 aa8.16□□□□□ -1.1
ATG4A-205ENST00000394892 PTGS2P35354 604 aa8.16□□□□□ -1.1
ATG4A-205ENST00000394892 MAGEA5P43359 124 aa8.16□□□□□ -1.1
ATG4A-205ENST00000394892 RAE1P78406 368 aaKnown RBP8.16□□□□□ -1.1
ATG4A-205ENST00000394892 FUT7Q11130 342 aa8.16□□□□□ -1.1
ATG4A-205ENST00000394892 SLC29A2Q14542 456 aa8.16□□□□□ -1.1
ATG4A-205ENST00000394892 HYAL4Q2M3T9 481 aa8.16□□□□□ -1.1
ATG4A-205ENST00000394892 TSNAXIP1Q2TAA8 658 aa8.16□□□□□ -1.1
ATG4A-205ENST00000394892 ZNF678Q5SXM1 525 aa8.16□□□□□ -1.1
ATG4A-205ENST00000394892 NDUFAF5Q5TEU4 345 aa8.16□□□□□ -1.1
ATG4A-205ENST00000394892 BICRALQ6AI39 1079 aa8.16□□□□□ -1.1
ATG4A-205ENST00000394892 RTL6Q6ICC9 239 aa8.16□□□□□ -1.1
ATG4A-205ENST00000394892 FAM180BQ6P0A1 224 aa8.16□□□□□ -1.1
ATG4A-205ENST00000394892 MYO7BQ6PIF6 2116 aa8.16□□□□□ -1.1
ATG4A-205ENST00000394892 RTL4Q6ZR62 310 aa8.16□□□□□ -1.1
ATG4A-205ENST00000394892 COMMD6Q7Z4G1 85 aa8.16□□□□□ -1.1
ATG4A-205ENST00000394892 MILR1Q7Z6M3 343 aa8.16□□□□□ -1.1
ATG4A-205ENST00000394892 CD163Q86VB7 1156 aa8.16□□□□□ -1.1
ATG4A-205ENST00000394892 GPALPP1Q8IXQ4 340 aa8.16□□□□□ -1.1
ATG4A-205ENST00000394892 EID3Q8N140 333 aa8.16□□□□□ -1.1
ATG4A-205ENST00000394892 FAM98AQ8NCA5 519 aaKnown RBP8.16□□□□□ -1.1
ATG4A-205ENST00000394892 OR10G3Q8NGC4 313 aa8.16□□□□□ -1.1
ATG4A-205ENST00000394892 TRPC4APQ8TEL6 797 aa8.16□□□□□ -1.1
ATG4A-205ENST00000394892 PAQR8Q8TEZ7 354 aa8.16□□□□□ -1.1
ATG4A-205ENST00000394892 ADIPOR1Q96A54 375 aa8.16□□□□□ -1.1
ATG4A-205ENST00000394892 DGAT2Q96PD7 388 aa8.16□□□□□ -1.1
ATG4A-205ENST00000394892 SERPINI1Q99574 410 aa8.16□□□□□ -1.1
ATG4A-205ENST00000394892 VKORC1Q9BQB6 163 aa8.16□□□□□ -1.1
ATG4A-205ENST00000394892 RHOXF2Q9BQY4 288 aa8.16□□□□□ -1.1
ATG4A-205ENST00000394892 CNPPD1Q9BV87 410 aa8.16□□□□□ -1.1
ATG4A-205ENST00000394892 TRIM8Q9BZR9 551 aa8.16□□□□□ -1.1
ATG4A-205ENST00000394892 WWTR1Q9GZV5 400 aa8.16□□□□□ -1.1
ATG4A-205ENST00000394892 C12orf65Q9H3J6 166 aaKnown RBP8.16□□□□□ -1.1
ATG4A-205ENST00000394892 MS4A12Q9NXJ0 267 aa8.16□□□□□ -1.1
ATG4A-205ENST00000394892 HEY2Q9UBP5 337 aa8.16□□□□□ -1.1
ATG4A-205ENST00000394892 CNOT11Q9UKZ1 510 aaKnown RBP8.16□□□□□ -1.1
ATG4A-205ENST00000394892 DCHS2Q6V1P9 2916 aa8.15□□□□□ -1.1
ATG4A-205ENST00000394892 OTOGQ6ZRI0 2925 aa8.15□□□□□ -1.1
ATG4A-205ENST00000394892 A0A1B0GVC2 190 aa8.15□□□□□ -1.1
ATG4A-205ENST00000394892 SYNDIG1LA6NDD5 238 aa8.15□□□□□ -1.1
ATG4A-205ENST00000394892 KDM4EB2RXH2 506 aaPredicted RBP8.15□□□□□ -1.1
ATG4A-205ENST00000394892 G3V2L1 256 aa8.15□□□□□ -1.1
ATG4A-205ENST00000394892 MANBAO00462 879 aa8.15□□□□□ -1.1
ATG4A-205ENST00000394892 CDC40O60508 579 aaKnown RBP eCLIP8.15□□□□□ -1.1
ATG4A-205ENST00000394892 SMIM24O75264 130 aa8.15□□□□□ -1.1
ATG4A-205ENST00000394892 CLDN14O95500 239 aa8.15□□□□□ -1.1
ATG4A-205ENST00000394892 FBXO45P0C2W1 286 aa8.15□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms