RNA–Protein interactions for RNA: ENST00000394253.7

USP49-203, Transcript of ubiquitin specific peptidase 49, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP49, Length 9,034 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-203ENST00000394253 OAZ1P54368 228 aa12.9□□□□□ -0.34
USP49-203ENST00000394253 GSCP56915 257 aaPredicted RBP12.9□□□□□ -0.34
USP49-203ENST00000394253 NXPE4Q6UWF7 544 aa12.9□□□□□ -0.34
USP49-203ENST00000394253 ZNF679Q8IYX0 411 aa12.9□□□□□ -0.34
USP49-203ENST00000394253 PTCHD1Q96NR3 888 aa12.9□□□□□ -0.34
USP49-203ENST00000394253 CSPG4P5Q96PW8 444 aa12.9□□□□□ -0.34
USP49-203ENST00000394253 RRAGCQ9HB90 399 aa12.9□□□□□ -0.34
USP49-203ENST00000394253 ACP6Q9NPH0 428 aa12.9□□□□□ -0.34
USP49-203ENST00000394253 MADDQ8WXG6 1647 aa12.9□□□□□ -0.34
USP49-203ENST00000394253 CREG1O75629 220 aa12.9□□□□□ -0.34
USP49-203ENST00000394253 CBSLP0DN79 551 aa12.9□□□□□ -0.34
USP49-203ENST00000394253 PTPRAP18433 802 aa12.9□□□□□ -0.34
USP49-203ENST00000394253 CBSP35520 551 aa12.9□□□□□ -0.34
USP49-203ENST00000394253 SLC18A1P54219 525 aa12.9□□□□□ -0.34
USP49-203ENST00000394253 MMAAQ8IVH4 418 aaKnown RBP12.9□□□□□ -0.34
USP49-203ENST00000394253 LGALS12Q96DT0 336 aa12.9□□□□□ -0.34
USP49-203ENST00000394253 PITHD1Q9GZP4 211 aaPredicted RBP12.9□□□□□ -0.34
USP49-203ENST00000394253 DUSP22Q9NRW4 184 aa12.9□□□□□ -0.34
USP49-203ENST00000394253 PTTG3PQ9NZH4 202 aa12.9□□□□□ -0.34
USP49-203ENST00000394253 PPM1HQ9ULR3 514 aa12.9□□□□□ -0.34
USP49-203ENST00000394253 TGFB1P01137 390 aa12.9□□□□□ -0.34
USP49-203ENST00000394253 GMPRP36959 345 aa12.9□□□□□ -0.34
USP49-203ENST00000394253 PPM1JQ5JR12 505 aa12.9□□□□□ -0.34
USP49-203ENST00000394253 BRICD5Q6PL45 260 aa12.9□□□□□ -0.34
USP49-203ENST00000394253 PET117Q6UWS5 81 aa12.9□□□□□ -0.34
USP49-203ENST00000394253 SERPINA12Q8IW75 414 aa12.9□□□□□ -0.34
USP49-203ENST00000394253 OR6T1Q8NGN1 323 aa12.9□□□□□ -0.34
USP49-203ENST00000394253 NT5C3BQ969T7 300 aa12.9□□□□□ -0.34
USP49-203ENST00000394253 SLC28A3Q9HAS3 691 aa12.9□□□□□ -0.34
USP49-203ENST00000394253 KLHL21Q9UJP4 597 aa12.9□□□□□ -0.34
USP49-203ENST00000394253 AGPAT2O15120 278 aa12.9□□□□□ -0.34
USP49-203ENST00000394253 HLA-DOBP13765 273 aa12.9□□□□□ -0.34
USP49-203ENST00000394253 CYBRD1Q53TN4 286 aa12.9□□□□□ -0.34
USP49-203ENST00000394253 DCBLD1Q8N8Z6 715 aa12.9□□□□□ -0.34
USP49-203ENST00000394253 FAM173AQ9BQD7 235 aa12.9□□□□□ -0.34
USP49-203ENST00000394253 PINK1Q9BXM7 581 aa12.9□□□□□ -0.34
USP49-203ENST00000394253 MINDY3Q9H8M7 445 aa12.9□□□□□ -0.34
USP49-203ENST00000394253 hCG_1807616A0A1W2PRN6 198 aa12.9□□□□□ -0.34
USP49-203ENST00000394253 PRSS44E7EML9 344 aa12.9□□□□□ -0.34
USP49-203ENST00000394253 RBM39Q14498 530 aaKnown RBP12.9□□□□□ -0.34
USP49-203ENST00000394253 NAA40Q86UY6 237 aa12.9□□□□□ -0.34
USP49-203ENST00000394253 SOCS4Q8WXH5 440 aa12.9□□□□□ -0.34
USP49-203ENST00000394253 CDCA5Q96FF9 252 aa12.9□□□□□ -0.34
USP49-203ENST00000394253 WDR77Q9BQA1 342 aaPredicted RBP12.9□□□□□ -0.34
USP49-203ENST00000394253 METTL7AQ9H8H3 244 aa12.9□□□□□ -0.34
USP49-203ENST00000394253 ADAP2Q9NPF8 381 aa12.9□□□□□ -0.34
USP49-203ENST00000394253 ABCA7Q8IZY2 2146 aa12.9□□□□□ -0.34
USP49-203ENST00000394253 ARP10275 920 aa12.9□□□□□ -0.35
USP49-203ENST00000394253 FUT4P22083 530 aa12.9□□□□□ -0.35
USP49-203ENST00000394253 CPT2P23786 658 aa12.9□□□□□ -0.35
USP49-203ENST00000394253 IL13RA1P78552 427 aa12.9□□□□□ -0.35
USP49-203ENST00000394253 GRIN2CQ14957 1233 aa12.9□□□□□ -0.35
USP49-203ENST00000394253 FAM109AQ8N4B1 249 aa12.9□□□□□ -0.35
USP49-203ENST00000394253 PAPOLGQ9BWT3 736 aaKnown RBP12.9□□□□□ -0.35
USP49-203ENST00000394253 FKTNO75072 461 aa12.89□□□□□ -0.35
USP49-203ENST00000394253 DNAJB1P25685 340 aa12.89□□□□□ -0.35
USP49-203ENST00000394253 PBX2P40425 430 aa12.89□□□□□ -0.35
USP49-203ENST00000394253 KIAA1211LQ6NV74 962 aa12.89□□□□□ -0.35
USP49-203ENST00000394253 ESPNLQ6ZVH7 1005 aa12.89□□□□□ -0.35
USP49-203ENST00000394253 C2orf73Q8N5S3 287 aaPredicted RBP12.89□□□□□ -0.35
USP49-203ENST00000394253 SORCS1Q8WY21 1168 aa12.89□□□□□ -0.35
USP49-203ENST00000394253 TXNDC15Q96J42 360 aa12.89□□□□□ -0.35
USP49-203ENST00000394253 GON7Q9BXV9 100 aa12.89□□□□□ -0.35
USP49-203ENST00000394253 CNTN3Q9P232 1028 aa12.89□□□□□ -0.35
USP49-203ENST00000394253 SLC22A31A6NKX4 558 aa12.89□□□□□ -0.35
USP49-203ENST00000394253 UGT2B7P16662 529 aa12.89□□□□□ -0.35
USP49-203ENST00000394253 SMAP2Q8WU79 429 aaPredicted RBP12.89□□□□□ -0.35
USP49-203ENST00000394253 TRMT61BQ9BVS5 477 aaKnown RBP12.89□□□□□ -0.35
USP49-203ENST00000394253 DNAJC5BQ9UF47 199 aa12.89□□□□□ -0.35
USP49-203ENST00000394253 A0A087WZY1 265 aa12.89□□□□□ -0.35
USP49-203ENST00000394253 H3BSH0 61 aa12.89□□□□□ -0.35
USP49-203ENST00000394253 ACOT7O00154 380 aa12.89□□□□□ -0.35
USP49-203ENST00000394253 NFKBIEO00221 500 aa12.89□□□□□ -0.35
USP49-203ENST00000394253 ADAM12O43184 909 aa12.89□□□□□ -0.35
USP49-203ENST00000394253 SYNGR4O95473 234 aa12.89□□□□□ -0.35
USP49-203ENST00000394253 PTBP3O95758 552 aaKnown RBP12.89□□□□□ -0.35
USP49-203ENST00000394253 VAMP3Q15836 100 aa12.89□□□□□ -0.35
USP49-203ENST00000394253 PCGF3Q3KNV8 242 aa12.89□□□□□ -0.35
USP49-203ENST00000394253 OR6C4Q8NGE1 309 aa12.89□□□□□ -0.35
USP49-203ENST00000394253 MED30Q96HR3 178 aa12.89□□□□□ -0.35
USP49-203ENST00000394253 RNF170Q96K19 258 aa12.89□□□□□ -0.35
USP49-203ENST00000394253 MFFQ9GZY8 342 aa12.89□□□□□ -0.35
USP49-203ENST00000394253 PATZ1Q9HBE1 687 aaKnown RBP12.89□□□□□ -0.35
USP49-203ENST00000394253 MSRAQ9UJ68 235 aa12.89□□□□□ -0.35
USP49-203ENST00000394253 HSPE1-MOB4S4R3N1 261 aa12.89□□□□□ -0.35
USP49-203ENST00000394253 NEXMIFQ5QGS0 1516 aa12.89□□□□□ -0.35
USP49-203ENST00000394253 CHRM1P11229 460 aaPredicted RBP12.89□□□□□ -0.35
USP49-203ENST00000394253 SNRPD2P62316 118 aaKnown RBP12.89□□□□□ -0.35
USP49-203ENST00000394253 BAMBIQ13145 260 aa12.89□□□□□ -0.35
USP49-203ENST00000394253 ARHGAP11BQ3KRB8 267 aa12.89□□□□□ -0.35
USP49-203ENST00000394253 RFPL4BQ6ZWI9 263 aa12.89□□□□□ -0.35
USP49-203ENST00000394253 TPRA1Q86W33 373 aa12.89□□□□□ -0.35
USP49-203ENST00000394253 SYT14Q8NB59 555 aa12.89□□□□□ -0.35
USP49-203ENST00000394253 NFKBIDQ8NI38 313 aa12.89□□□□□ -0.35
USP49-203ENST00000394253 ZUFSPQ96AP4 578 aa12.89□□□□□ -0.35
USP49-203ENST00000394253 CMTM7Q96FZ5 175 aa12.89□□□□□ -0.35
USP49-203ENST00000394253 LSM5Q9Y4Y9 91 aaKnown RBP12.89□□□□□ -0.35
USP49-203ENST00000394253 ASB3Q9Y575 518 aa12.89□□□□□ -0.35
USP49-203ENST00000394253 WASH4PA8MWX3 477 aa12.89□□□□□ -0.35
USP49-203ENST00000394253 OR4F21O95013 312 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms