RNA–Protein interactions for RNA: ENST00000393546.8

PDLIM7-204, Transcript of PDZ and LIM domain 7, humanhuman

TSL 3

Gene PDLIM7, Length 671 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-204ENST00000393546 ZNF781Q8N8C0 355 aa17.69■□□□□ 0.42
PDLIM7-204ENST00000393546 CDC26Q8NHZ8 85 aa17.69■□□□□ 0.42
PDLIM7-204ENST00000393546 RAB3IL1Q8TBN0 382 aa17.69■□□□□ 0.42
PDLIM7-204ENST00000393546 KLHL29Q96CT2 875 aa17.69■□□□□ 0.42
PDLIM7-204ENST00000393546 NPAS2Q99743 824 aa17.69■□□□□ 0.42
PDLIM7-204ENST00000393546 C20orf27Q9GZN8 174 aa17.69■□□□□ 0.42
PDLIM7-204ENST00000393546 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP17.69■□□□□ 0.42
PDLIM7-204ENST00000393546 ACBD3Q9H3P7 528 aa17.69■□□□□ 0.42
PDLIM7-204ENST00000393546 HEY2Q9UBP5 337 aa17.69■□□□□ 0.42
PDLIM7-204ENST00000393546 ZNF223Q9UK11 482 aaPredicted RBP17.69■□□□□ 0.42
PDLIM7-204ENST00000393546 UTS2RQ9UKP6 389 aa17.69■□□□□ 0.42
PDLIM7-204ENST00000393546 TMED5Q9Y3A6 229 aa17.69■□□□□ 0.42
PDLIM7-204ENST00000393546 CFAP46Q8IYW2 2715 aa17.69■□□□□ 0.42
PDLIM7-204ENST00000393546 FCHO1O14526 889 aa17.68■□□□□ 0.42
PDLIM7-204ENST00000393546 SLC28A2O43868 658 aa17.68■□□□□ 0.42
PDLIM7-204ENST00000393546 SKAP2O75563 359 aaPredicted RBP17.68■□□□□ 0.42
PDLIM7-204ENST00000393546 FEN1P39748 380 aaKnown RBP17.68■□□□□ 0.42
PDLIM7-204ENST00000393546 MLF1P58340 268 aa17.68■□□□□ 0.42
PDLIM7-204ENST00000393546 SPRED3Q2MJR0 410 aa17.68■□□□□ 0.42
PDLIM7-204ENST00000393546 RFTN2Q52LD8 501 aaPredicted RBP17.68■□□□□ 0.42
PDLIM7-204ENST00000393546 C6orf163Q5TEZ5 329 aa17.68■□□□□ 0.42
PDLIM7-204ENST00000393546 SAMD14Q8IZD0 417 aaPredicted RBP17.68■□□□□ 0.42
PDLIM7-204ENST00000393546 CATSPER1Q8NEC5 780 aa17.68■□□□□ 0.42
PDLIM7-204ENST00000393546 OR5L2Q8NGL0 311 aa17.68■□□□□ 0.42
PDLIM7-204ENST00000393546 OR8K3Q8NH51 312 aa17.68■□□□□ 0.42
PDLIM7-204ENST00000393546 SUN3Q8TAQ9 357 aa17.68■□□□□ 0.42
PDLIM7-204ENST00000393546 ZNF721Q8TF20 911 aa17.68■□□□□ 0.42
PDLIM7-204ENST00000393546 THAP3Q8WTV1 239 aaPredicted RBP17.68■□□□□ 0.42
PDLIM7-204ENST00000393546 FBXL20Q96IG2 436 aa17.68■□□□□ 0.42
PDLIM7-204ENST00000393546 SORT1Q99523 831 aa17.68■□□□□ 0.42
PDLIM7-204ENST00000393546 UTP23Q9BRU9 249 aaKnown RBP17.68■□□□□ 0.42
PDLIM7-204ENST00000393546 CNPPD1Q9BV87 410 aa17.68■□□□□ 0.42
PDLIM7-204ENST00000393546 MANSC1Q9H8J5 431 aa17.68■□□□□ 0.42
PDLIM7-204ENST00000393546 MYNNQ9NPC7 610 aa17.68■□□□□ 0.42
PDLIM7-204ENST00000393546 GIMAP4Q9NUV9 329 aa17.68■□□□□ 0.42
PDLIM7-204ENST00000393546 SDAD1Q9NVU7 687 aaKnown RBP eCLIP17.68■□□□□ 0.427e-8■■■■■ 55
PDLIM7-204ENST00000393546 THAP1Q9NVV9 213 aa17.68■□□□□ 0.42
PDLIM7-204ENST00000393546 CSAG2Q9Y5P2 127 aa17.68■□□□□ 0.42
PDLIM7-204ENST00000393546 CPAMD8Q8IZJ3 1885 aa17.67■□□□□ 0.42
PDLIM7-204ENST00000393546 A0A1W2PS29 197 aa17.67■□□□□ 0.42
PDLIM7-204ENST00000393546 OR5H15A6NDH6 313 aa17.67■□□□□ 0.42
PDLIM7-204ENST00000393546 TTLL8A6PVC2 850 aa17.67■□□□□ 0.42
PDLIM7-204ENST00000393546 PEX11AO75192 247 aa17.67■□□□□ 0.42
PDLIM7-204ENST00000393546 SASH3O75995 380 aa17.67■□□□□ 0.42
PDLIM7-204ENST00000393546 F10P00742 488 aa17.67■□□□□ 0.42
PDLIM7-204ENST00000393546 DDCP20711 480 aa17.67■□□□□ 0.42
PDLIM7-204ENST00000393546 NT5EP21589 574 aa17.67■□□□□ 0.42
PDLIM7-204ENST00000393546 TNFSF10P50591 281 aa17.67■□□□□ 0.42
PDLIM7-204ENST00000393546 ERVK-8P63133 956 aa17.67■□□□□ 0.42
PDLIM7-204ENST00000393546 RPL38P63173 70 aaKnown RBP17.67■□□□□ 0.42
PDLIM7-204ENST00000393546 ZNF169Q14929 603 aaPredicted RBP17.67■□□□□ 0.42
PDLIM7-204ENST00000393546 ZNF750Q32MQ0 723 aa17.67■□□□□ 0.42
PDLIM7-204ENST00000393546 ATP6AP1LQ52LC2 224 aa17.67■□□□□ 0.42
PDLIM7-204ENST00000393546 XKR7Q5GH72 579 aa17.67■□□□□ 0.42
PDLIM7-204ENST00000393546 FAM71E1Q6IPT2 247 aa17.67■□□□□ 0.42
PDLIM7-204ENST00000393546 IKBIPQ70UQ0 350 aa17.67■□□□□ 0.42
PDLIM7-204ENST00000393546 ARMC10Q8N2F6 343 aa17.67■□□□□ 0.42
PDLIM7-204ENST00000393546 ZNF321PQ8N8H1 164 aa17.67■□□□□ 0.42
PDLIM7-204ENST00000393546 PUM2Q8TB72 1066 aaKnown RBP eCLIP17.67■□□□□ 0.42
PDLIM7-204ENST00000393546 DOK4Q8TEW6 326 aa17.67■□□□□ 0.42
PDLIM7-204ENST00000393546 FCRL1Q96LA6 429 aa17.67■□□□□ 0.42
PDLIM7-204ENST00000393546 C3orf30Q96M34 536 aa17.67■□□□□ 0.42
PDLIM7-204ENST00000393546 CXorf21Q9HAI6 301 aa17.67■□□□□ 0.42
PDLIM7-204ENST00000393546 EHD3Q9NZN3 535 aa17.67■□□□□ 0.42
PDLIM7-204ENST00000393546 LUZP4Q9P127 313 aa17.67■□□□□ 0.42
PDLIM7-204ENST00000393546 HAO1Q9UJM8 370 aa17.67■□□□□ 0.42
PDLIM7-204ENST00000393546 ERVK-19Q9WJR5 959 aa17.67■□□□□ 0.42
PDLIM7-204ENST00000393546 TRAV17A0A0B4J275 112 aa17.66■□□□□ 0.42
PDLIM7-204ENST00000393546 ATP6AP2A0A1C7CYW4 349 aa17.66■□□□□ 0.42
PDLIM7-204ENST00000393546 GABRR3A8MPY1 467 aa17.66■□□□□ 0.42
PDLIM7-204ENST00000393546 MAN1A2O60476 641 aa17.66■□□□□ 0.42
PDLIM7-204ENST00000393546 ATP6AP2O75787 350 aa17.66■□□□□ 0.42
PDLIM7-204ENST00000393546 IGKV3-11P04433 115 aa17.66■□□□□ 0.42
PDLIM7-204ENST00000393546 MAPK1P28482 360 aa17.66■□□□□ 0.42
PDLIM7-204ENST00000393546 RNF4P78317 190 aa17.66■□□□□ 0.42
PDLIM7-204ENST00000393546 OC90Q02509 493 aaPredicted RBP17.66■□□□□ 0.42
PDLIM7-204ENST00000393546 GALNT12Q8IXK2 581 aa17.66■□□□□ 0.42
PDLIM7-204ENST00000393546 LRRC25Q8N386 305 aaPredicted RBP17.66■□□□□ 0.42
PDLIM7-204ENST00000393546 Q8NA96 180 aa17.66■□□□□ 0.42
PDLIM7-204ENST00000393546 EXOSC8Q96B26 276 aaKnown RBP17.66■□□□□ 0.42
PDLIM7-204ENST00000393546 TUBGCP3Q96CW5 907 aa17.66■□□□□ 0.42
PDLIM7-204ENST00000393546 C19orf60Q96EN9 201 aa17.66■□□□□ 0.42
PDLIM7-204ENST00000393546 ZNF681Q96N22 645 aa17.66■□□□□ 0.42
PDLIM7-204ENST00000393546 MIEF1Q9NQG6 463 aa17.66■□□□□ 0.42
PDLIM7-204ENST00000393546 SLC35C2Q9NQQ7 365 aa17.66■□□□□ 0.42
PDLIM7-204ENST00000393546 ENTPD4Q9Y227 616 aa17.66■□□□□ 0.42
PDLIM7-204ENST00000393546 YARS2Q9Y2Z4 477 aaKnown RBP17.66■□□□□ 0.42
PDLIM7-204ENST00000393546 UQCRHLA0A096LP55 91 aa17.65■□□□□ 0.42
PDLIM7-204ENST00000393546 HRKO00198 91 aa17.65■□□□□ 0.42
PDLIM7-204ENST00000393546 PRKNO60260 465 aaPredicted RBP17.65■□□□□ 0.42
PDLIM7-204ENST00000393546 SNNO75324 88 aaPredicted RBP17.65■□□□□ 0.42
PDLIM7-204ENST00000393546 SORBS2O94875 1100 aaKnown RBP17.65■□□□□ 0.42
PDLIM7-204ENST00000393546 ATP1B1P05026 303 aa17.65■□□□□ 0.42
PDLIM7-204ENST00000393546 TACR1P25103 407 aa17.65■□□□□ 0.42
PDLIM7-204ENST00000393546 CD96P40200 585 aa17.65■□□□□ 0.42
PDLIM7-204ENST00000393546 MAP4K2Q12851 820 aa17.65■□□□□ 0.42
PDLIM7-204ENST00000393546 TUBA3CQ13748 450 aa17.65■□□□□ 0.42
PDLIM7-204ENST00000393546 PDCD2Q16342 344 aaPredicted RBP17.65■□□□□ 0.42
PDLIM7-204ENST00000393546 C6orf136Q5SQH8 315 aa17.65■□□□□ 0.42
PDLIM7-204ENST00000393546 TUBA3EQ6PEY2 450 aa17.65■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms