RNA–Protein interactions for RNA: ENST00000393454.6

TDP1-203, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TDP1, Length 2,068 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-203ENST00000393454 LTB4RQ15722 352 aa8.14□□□□□ -1.11
TDP1-203ENST00000393454 GPR19Q15760 415 aa8.14□□□□□ -1.11
TDP1-203ENST00000393454 CYBRD1Q53TN4 286 aa8.14□□□□□ -1.11
TDP1-203ENST00000393454 PEAR1Q5VY43 1037 aaPredicted RBP8.14□□□□□ -1.11
TDP1-203ENST00000393454 GUSBP11Q6P575 273 aa8.14□□□□□ -1.11
TDP1-203ENST00000393454 BHLHB9Q6PI77 547 aa8.14□□□□□ -1.11
TDP1-203ENST00000393454 PRR23CQ6ZRP0 262 aa8.14□□□□□ -1.11
TDP1-203ENST00000393454 SPRED1Q7Z699 444 aa8.14□□□□□ -1.11
TDP1-203ENST00000393454 SAMD14Q8IZD0 417 aaPredicted RBP8.14□□□□□ -1.11
TDP1-203ENST00000393454 SHISA5Q8N114 240 aa8.14□□□□□ -1.11
TDP1-203ENST00000393454 OR6C4Q8NGE1 309 aa8.14□□□□□ -1.11
TDP1-203ENST00000393454 OR56A1Q8NGH5 318 aa8.14□□□□□ -1.11
TDP1-203ENST00000393454 MOAP1Q96BY2 351 aa8.14□□□□□ -1.11
TDP1-203ENST00000393454 HSH2DQ96JZ2 352 aa8.14□□□□□ -1.11
TDP1-203ENST00000393454 ZNF681Q96N22 645 aa8.14□□□□□ -1.11
TDP1-203ENST00000393454 ZNF570Q96NI8 536 aa8.14□□□□□ -1.11
TDP1-203ENST00000393454 RBCK1Q9BYM8 510 aa8.14□□□□□ -1.11
TDP1-203ENST00000393454 MAGIXQ9H6Y5 334 aa8.14□□□□□ -1.11
TDP1-203ENST00000393454 ANGPT4Q9Y264 503 aa8.14□□□□□ -1.11
TDP1-203ENST00000393454 PDLIM1O00151 329 aa8.13□□□□□ -1.11
TDP1-203ENST00000393454 AGRPO00253 132 aa8.13□□□□□ -1.11
TDP1-203ENST00000393454 ARHGAP33O14559 1287 aa8.13□□□□□ -1.11
TDP1-203ENST00000393454 SUV39H1O43463 412 aa8.13□□□□□ -1.11
TDP1-203ENST00000393454 OR2B3O76000 313 aa8.13□□□□□ -1.11
TDP1-203ENST00000393454 MED26O95402 600 aa8.13□□□□□ -1.11
TDP1-203ENST00000393454 CER1O95813 267 aa8.13□□□□□ -1.11
TDP1-203ENST00000393454 OPN1SWP03999 348 aa8.13□□□□□ -1.11
TDP1-203ENST00000393454 BCHEP06276 602 aa8.13□□□□□ -1.11
TDP1-203ENST00000393454 FHP07954 510 aa8.13□□□□□ -1.11
TDP1-203ENST00000393454 SYPP08247 313 aa8.13□□□□□ -1.11
TDP1-203ENST00000393454 ARAFP10398 606 aa8.13□□□□□ -1.11
TDP1-203ENST00000393454 CPMP14384 443 aa8.13□□□□□ -1.11
TDP1-203ENST00000393454 PORP16435 677 aaPredicted RBP8.13□□□□□ -1.11
TDP1-203ENST00000393454 ZNF23P17027 643 aa8.13□□□□□ -1.11
TDP1-203ENST00000393454 AVPR2P30518 371 aa8.13□□□□□ -1.11
TDP1-203ENST00000393454 AVPR1BP47901 424 aa8.13□□□□□ -1.11
TDP1-203ENST00000393454 GABRA4P48169 554 aa8.13□□□□□ -1.11
TDP1-203ENST00000393454 GRM7Q14831 915 aa8.13□□□□□ -1.11
TDP1-203ENST00000393454 LASP1Q14847 261 aaKnown RBP8.13□□□□□ -1.11
TDP1-203ENST00000393454 NR1D2Q14995 579 aa8.13□□□□□ -1.11
TDP1-203ENST00000393454 CEBPEQ15744 281 aa8.13□□□□□ -1.11
TDP1-203ENST00000393454 PERM1Q5SV97 790 aa8.13□□□□□ -1.11
TDP1-203ENST00000393454 TMTC4Q5T4D3 741 aa8.13□□□□□ -1.11
TDP1-203ENST00000393454 TMEM64Q6YI46 380 aa8.13□□□□□ -1.11
TDP1-203ENST00000393454 CBLL1Q75N03 491 aa8.13□□□□□ -1.11
TDP1-203ENST00000393454 EIF3MQ7L2H7 374 aaKnown RBP8.13□□□□□ -1.11
TDP1-203ENST00000393454 VTCN1Q7Z7D3 282 aa8.13□□□□□ -1.11
TDP1-203ENST00000393454 TMEM52Q8NDY8 209 aa8.13□□□□□ -1.11
TDP1-203ENST00000393454 NUP43Q8NFH3 380 aa8.13□□□□□ -1.11
TDP1-203ENST00000393454 OR5D16Q8NGK9 328 aa8.13□□□□□ -1.11
TDP1-203ENST00000393454 SFXN5Q8TD22 340 aa8.13□□□□□ -1.11
TDP1-203ENST00000393454 XAGE5Q8WWM1 108 aa8.13□□□□□ -1.11
TDP1-203ENST00000393454 TANKQ92844 425 aa8.13□□□□□ -1.11
TDP1-203ENST00000393454 TBC1D20Q96BZ9 403 aa8.13□□□□□ -1.11
TDP1-203ENST00000393454 ELP4Q96EB1 424 aa8.13□□□□□ -1.11
TDP1-203ENST00000393454 MMABQ96EY8 250 aaPredicted RBP8.13□□□□□ -1.11
TDP1-203ENST00000393454 OTUB1Q96FW1 271 aaPredicted RBP8.13□□□□□ -1.11
TDP1-203ENST00000393454 SLC29A1Q99808 456 aa8.13□□□□□ -1.11
TDP1-203ENST00000393454 NUDT22Q9BRQ3 303 aa8.13□□□□□ -1.11
TDP1-203ENST00000393454 YIPF2Q9BWQ6 316 aa8.13□□□□□ -1.11
TDP1-203ENST00000393454 OR51I1Q9H343 314 aa8.13□□□□□ -1.11
TDP1-203ENST00000393454 SMOC1Q9H4F8 434 aa8.13□□□□□ -1.11
TDP1-203ENST00000393454 ANKRA2Q9H9E1 313 aa8.13□□□□□ -1.11
TDP1-203ENST00000393454 CAPN10Q9HC96 672 aa8.13□□□□□ -1.11
TDP1-203ENST00000393454 EQTNQ9NQ60 294 aa8.13□□□□□ -1.11
TDP1-203ENST00000393454 DNAAF2Q9NVR5 837 aaKnown RBP8.13□□□□□ -1.11
TDP1-203ENST00000393454 NDOR1Q9UHB4 597 aa8.13□□□□□ -1.11
TDP1-203ENST00000393454 BAG5Q9UL15 447 aa8.13□□□□□ -1.11
TDP1-203ENST00000393454 ATXN7L1Q9ULK2 861 aaPredicted RBP8.13□□□□□ -1.11
TDP1-203ENST00000393454 OAZ3Q9UMX2 235 aa8.13□□□□□ -1.11
TDP1-203ENST00000393454 hCG_2039718K7EN88 272 aa8.12□□□□□ -1.11
TDP1-203ENST00000393454 M0QX08 132 aa8.12□□□□□ -1.11
TDP1-203ENST00000393454 HMGN4O00479 90 aa8.12□□□□□ -1.11
TDP1-203ENST00000393454 CYR61O00622 381 aa8.12□□□□□ -1.11
TDP1-203ENST00000393454 SLC28A2O43868 658 aa8.12□□□□□ -1.11
TDP1-203ENST00000393454 FGF17O60258 216 aa8.12□□□□□ -1.11
TDP1-203ENST00000393454 GPR75O95800 540 aa8.12□□□□□ -1.11
TDP1-203ENST00000393454 CAPNS1P04632 268 aa8.12□□□□□ -1.11
TDP1-203ENST00000393454 RNH1P13489 461 aaKnown RBP8.12□□□□□ -1.11
TDP1-203ENST00000393454 HOXB6P17509 224 aaKnown RBP8.12□□□□□ -1.11
TDP1-203ENST00000393454 NT5EP21589 574 aa8.12□□□□□ -1.11
TDP1-203ENST00000393454 ALAS2P22557 587 aa8.12□□□□□ -1.11
TDP1-203ENST00000393454 KHKP50053 298 aa8.12□□□□□ -1.11
TDP1-203ENST00000393454 ANXA11P50995 505 aaKnown RBP8.12□□□□□ -1.11
TDP1-203ENST00000393454 MRPS35P82673 323 aaKnown RBP8.12□□□□□ -1.11
TDP1-203ENST00000393454 DAB2P98082 770 aa8.12□□□□□ -1.11
TDP1-203ENST00000393454 MAT1AQ00266 395 aaKnown RBP8.12□□□□□ -1.11
TDP1-203ENST00000393454 ZNF528Q3MIS6 628 aa8.12□□□□□ -1.11
TDP1-203ENST00000393454 RPS26P11Q5JNZ5 115 aaPredicted RBP8.12□□□□□ -1.11
TDP1-203ENST00000393454 GARNL3Q5VVW2 1013 aa8.12□□□□□ -1.11
TDP1-203ENST00000393454 REEP3Q6NUK4 255 aa8.12□□□□□ -1.11
TDP1-203ENST00000393454 NIPAL1Q6NVV3 410 aa8.12□□□□□ -1.11
TDP1-203ENST00000393454 WDR74Q6RFH5 385 aaPredicted RBP8.12□□□□□ -1.11
TDP1-203ENST00000393454 ZDHHC21Q8IVQ6 265 aa8.12□□□□□ -1.11
TDP1-203ENST00000393454 SLC30A8Q8IWU4 369 aa8.12□□□□□ -1.11
TDP1-203ENST00000393454 CARFQ8N187 725 aa8.12□□□□□ -1.11
TDP1-203ENST00000393454 ARHGEF39Q8N4T4 335 aa8.12□□□□□ -1.11
TDP1-203ENST00000393454 CBR4Q8N4T8 237 aa8.12□□□□□ -1.11
TDP1-203ENST00000393454 ZBTB44Q8NCP5 570 aa8.12□□□□□ -1.11
TDP1-203ENST00000393454 DOK4Q8TEW6 326 aa8.12□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms