RNA–Protein interactions for RNA: ENST00000392023.1

SPTBN4-203, Transcript of spectrin beta, non-erythrocytic 4, humanhuman

TSL 1 (best) BASIC

Gene SPTBN4, Length 2,419 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN4-203ENST00000392023 ACOT4Q8N9L9 421 aa20.12■□□□□ 0.81
SPTBN4-203ENST00000392023 SMRP1Q8NCR6 262 aa20.12■□□□□ 0.81
SPTBN4-203ENST00000392023 NEURL3Q96EH8 262 aa20.12■□□□□ 0.81
SPTBN4-203ENST00000392023 TMEM19Q96HH6 336 aa20.12■□□□□ 0.81
SPTBN4-203ENST00000392023 ZNF300Q96RE9 604 aaPredicted RBP20.12■□□□□ 0.81
SPTBN4-203ENST00000392023 WFDC6Q9BQY6 131 aa20.12■□□□□ 0.81
SPTBN4-203ENST00000392023 SERHL2Q9H4I8 314 aa20.12■□□□□ 0.81
SPTBN4-203ENST00000392023 A0A1W2PR48 441 aa20.12■□□□□ 0.81
SPTBN4-203ENST00000392023 FEN1P39748 380 aaKnown RBP20.12■□□□□ 0.81
SPTBN4-203ENST00000392023 PCBP3P57721 371 aaKnown RBP20.12■□□□□ 0.81
SPTBN4-203ENST00000392023 NPRL3Q12980 569 aa20.12■□□□□ 0.81
SPTBN4-203ENST00000392023 SKIV2LQ15477 1246 aaKnown RBP20.12■□□□□ 0.81
SPTBN4-203ENST00000392023 ZC3H12BQ5HYM0 836 aaKnown RBP20.12■□□□□ 0.81
SPTBN4-203ENST00000392023 XAGE5Q8WWM1 108 aa20.12■□□□□ 0.81
SPTBN4-203ENST00000392023 NIPSNAP1Q9BPW8 284 aa20.12■□□□□ 0.81
SPTBN4-203ENST00000392023 PRDM7Q9NQW5 492 aa20.12■□□□□ 0.81
SPTBN4-203ENST00000392023 APOBEC3BQ9UH17 382 aaKnown RBP20.12■□□□□ 0.81
SPTBN4-203ENST00000392023 TMA7Q9Y2S6 64 aaKnown RBP20.12■□□□□ 0.81
SPTBN4-203ENST00000392023 C5orf58C9J3I9 102 aa20.11■□□□□ 0.81
SPTBN4-203ENST00000392023 FAM227AF5H4B4 570 aa20.11■□□□□ 0.81
SPTBN4-203ENST00000392023 HMGN4O00479 90 aa20.11■□□□□ 0.81
SPTBN4-203ENST00000392023 RECKO95980 971 aa20.11■□□□□ 0.81
SPTBN4-203ENST00000392023 CHRM5P08912 532 aaPredicted RBP20.11■□□□□ 0.81
SPTBN4-203ENST00000392023 OR12D1P0DN82 309 aa20.11■□□□□ 0.81
SPTBN4-203ENST00000392023 NCBP2P52298 156 aaKnown RBP eCLIP20.11■□□□□ 0.81
SPTBN4-203ENST00000392023 PUM1Q14671 1186 aaKnown RBP eCLIP20.11■□□□□ 0.81
SPTBN4-203ENST00000392023 SLC9A5Q14940 896 aa20.11■□□□□ 0.81
SPTBN4-203ENST00000392023 GPR19Q15760 415 aa20.11■□□□□ 0.81
SPTBN4-203ENST00000392023 SYPL1Q16563 259 aa20.11■□□□□ 0.81
SPTBN4-203ENST00000392023 CRB2Q5IJ48 1285 aa20.11■□□□□ 0.81
SPTBN4-203ENST00000392023 REEP3Q6NUK4 255 aa20.11■□□□□ 0.81
SPTBN4-203ENST00000392023 SHISA5Q8N114 240 aa20.11■□□□□ 0.81
SPTBN4-203ENST00000392023 PARP8Q8N3A8 854 aa20.11■□□□□ 0.81
SPTBN4-203ENST00000392023 SLC44A3Q8N4M1 653 aa20.11■□□□□ 0.81
SPTBN4-203ENST00000392023 MINDY2Q8NBR6 621 aa20.11■□□□□ 0.81
SPTBN4-203ENST00000392023 SCARF2Q96GP6 870 aaPredicted RBP20.11■□□□□ 0.81
SPTBN4-203ENST00000392023 EPYCQ99645 322 aa20.11■□□□□ 0.81
SPTBN4-203ENST00000392023 ERVK-18Q9QC07 812 aa20.11■□□□□ 0.81
SPTBN4-203ENST00000392023 NDRG2Q9UN36 371 aaKnown RBP20.11■□□□□ 0.81
SPTBN4-203ENST00000392023 ANGPT4Q9Y264 503 aa20.11■□□□□ 0.81
SPTBN4-203ENST00000392023 COLEC10Q9Y6Z7 277 aa20.11■□□□□ 0.81
SPTBN4-203ENST00000392023 TNRC18O15417 2968 aaPredicted RBP20.11■□□□□ 0.81
SPTBN4-203ENST00000392023 FANCMQ8IYD8 2048 aa20.11■□□□□ 0.81
SPTBN4-203ENST00000392023 RYKP34925 604 aa20.11■□□□□ 0.81
SPTBN4-203ENST00000392023 NFATC4Q14934 902 aa20.11■□□□□ 0.81
SPTBN4-203ENST00000392023 FAHD1Q6P587 224 aa20.11■□□□□ 0.81
SPTBN4-203ENST00000392023 ABHD17CQ6PCB6 329 aa20.11■□□□□ 0.81
SPTBN4-203ENST00000392023 RBM45Q8IUH3 476 aaKnown RBP20.11■□□□□ 0.81
SPTBN4-203ENST00000392023 OR7G1Q8NGA0 311 aa20.11■□□□□ 0.81
SPTBN4-203ENST00000392023 LILRB4Q8NHJ6 448 aa20.11■□□□□ 0.81
SPTBN4-203ENST00000392023 ZBED6CLQ96FA7 236 aaPredicted RBP20.11■□□□□ 0.81
SPTBN4-203ENST00000392023 WDR92Q96MX6 357 aa20.11■□□□□ 0.81
SPTBN4-203ENST00000392023 TMEM9Q9P0T7 183 aa20.11■□□□□ 0.81
SPTBN4-203ENST00000392023 TRPC4Q9UBN4 977 aa20.11■□□□□ 0.81
SPTBN4-203ENST00000392023 PRAMEF27A3QJZ7 478 aa20.1■□□□□ 0.81
SPTBN4-203ENST00000392023 ALOX5P09917 674 aa20.1■□□□□ 0.81
SPTBN4-203ENST00000392023 GABRG2P18507 467 aa20.1■□□□□ 0.81
SPTBN4-203ENST00000392023 HIST1H1TP22492 207 aaPredicted RBP20.1■□□□□ 0.81
SPTBN4-203ENST00000392023 IGFBP4P22692 258 aa20.1■□□□□ 0.81
SPTBN4-203ENST00000392023 SELENBP1Q13228 472 aa20.1■□□□□ 0.81
SPTBN4-203ENST00000392023 MAPK11Q15759 364 aa20.1■□□□□ 0.81
SPTBN4-203ENST00000392023 ZIC1Q15915 447 aa20.1■□□□□ 0.81
SPTBN4-203ENST00000392023 OR10G6Q8NH81 332 aa20.1■□□□□ 0.81
SPTBN4-203ENST00000392023 AMDHD1Q96NU7 426 aa20.1■□□□□ 0.81
SPTBN4-203ENST00000392023 RAB11FIP5Q9BXF6 653 aa20.1■□□□□ 0.81
SPTBN4-203ENST00000392023 TCEAL2Q9H3H9 227 aaPredicted RBP20.1■□□□□ 0.81
SPTBN4-203ENST00000392023 ANKMY1Q9P2S6 941 aa20.1■□□□□ 0.81
SPTBN4-203ENST00000392023 NDRG4Q9ULP0 352 aaKnown RBP20.1■□□□□ 0.81
SPTBN4-203ENST00000392023 INMTO95050 263 aa20.1■□□□□ 0.81
SPTBN4-203ENST00000392023 CHRNB1P11230 501 aa20.1■□□□□ 0.81
SPTBN4-203ENST00000392023 DRD1P21728 446 aa20.1■□□□□ 0.81
SPTBN4-203ENST00000392023 MAP2K4P45985 399 aa20.1■□□□□ 0.81
SPTBN4-203ENST00000392023 IFITM2Q01629 132 aa20.1■□□□□ 0.81
SPTBN4-203ENST00000392023 NFATC3Q12968 1075 aa20.1■□□□□ 0.81
SPTBN4-203ENST00000392023 TJAP1Q5JTD0 557 aa20.1■□□□□ 0.81
SPTBN4-203ENST00000392023 LSRQ86X29 649 aaPredicted RBP20.1■□□□□ 0.81
SPTBN4-203ENST00000392023 OR10G2Q8NGC3 310 aa20.1■□□□□ 0.81
SPTBN4-203ENST00000392023 VANGL1Q8TAA9 524 aaPredicted RBP20.1■□□□□ 0.81
SPTBN4-203ENST00000392023 GTPBP3Q969Y2 492 aaKnown RBP20.1■□□□□ 0.81
SPTBN4-203ENST00000392023 NRBF2Q96F24 287 aa20.1■□□□□ 0.81
SPTBN4-203ENST00000392023 BBS4Q96RK4 519 aa20.1■□□□□ 0.81
SPTBN4-203ENST00000392023 SRMSQ9H3Y6 488 aa20.1■□□□□ 0.81
SPTBN4-203ENST00000392023 AMBNQ9NP70 447 aa20.1■□□□□ 0.81
SPTBN4-203ENST00000392023 SLC35C2Q9NQQ7 365 aa20.1■□□□□ 0.81
SPTBN4-203ENST00000392023 PRELID1Q9Y255 219 aa20.1■□□□□ 0.81
SPTBN4-203ENST00000392023 M0R129 80 aa20.09■□□□□ 0.81
SPTBN4-203ENST00000392023 CPNE6O95741 557 aa20.09■□□□□ 0.81
SPTBN4-203ENST00000392023 ATP5A1P25705 553 aaKnown RBP20.09■□□□□ 0.81
SPTBN4-203ENST00000392023 CMPK1P30085 196 aa20.09■□□□□ 0.81
SPTBN4-203ENST00000392023 SERPINB1P30740 379 aa20.09■□□□□ 0.81
SPTBN4-203ENST00000392023 Q6ZS52 159 aa20.09■□□□□ 0.81
SPTBN4-203ENST00000392023 BPHLQ86WA6 291 aaPredicted RBP20.09■□□□□ 0.81
SPTBN4-203ENST00000392023 NLGN4XQ8N0W4 816 aa20.09■□□□□ 0.81
SPTBN4-203ENST00000392023 LGI4Q8N135 537 aa20.09■□□□□ 0.81
SPTBN4-203ENST00000392023 OR13F1Q8NGS4 319 aa20.09■□□□□ 0.81
SPTBN4-203ENST00000392023 NACC2Q96BF6 587 aa20.09■□□□□ 0.81
SPTBN4-203ENST00000392023 NODALQ96S42 347 aa20.09■□□□□ 0.81
SPTBN4-203ENST00000392023 PITHD1Q9GZP4 211 aaPredicted RBP20.09■□□□□ 0.81
SPTBN4-203ENST00000392023 ASB4Q9Y574 426 aa20.09■□□□□ 0.81
SPTBN4-203ENST00000392023 AP1M2Q9Y6Q5 423 aa20.09■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms