RNA–Protein interactions for RNA: ENST00000390990.1

RNU6-239P-201, Transcript of RNA, U6 small nuclear 239, pseudogene, humanhuman

BASIC

Gene RNU6-239P, Length 99 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-239P-201ENST00000390990 UCP2P55851 309 aa0.3□□□□□ -2.36
RNU6-239P-201ENST00000390990 NUP107P57740 925 aa0.3□□□□□ -2.36
RNU6-239P-201ENST00000390990 RPL27P61353 136 aaKnown RBP0.3□□□□□ -2.36
RNU6-239P-201ENST00000390990 ACSM1Q08AH1 577 aa0.3□□□□□ -2.36
RNU6-239P-201ENST00000390990 IL11RAQ14626 422 aa0.3□□□□□ -2.36
RNU6-239P-201ENST00000390990 SZRD1Q7Z422 152 aa0.3□□□□□ -2.36
RNU6-239P-201ENST00000390990 CENPVQ7Z7K6 275 aaPredicted RBP0.3□□□□□ -2.36
RNU6-239P-201ENST00000390990 CADM2Q8N3J6 435 aa0.3□□□□□ -2.36
RNU6-239P-201ENST00000390990 TTC30BQ8N4P2 665 aa0.3□□□□□ -2.36
RNU6-239P-201ENST00000390990 Q8N9W7 124 aa0.3□□□□□ -2.36
RNU6-239P-201ENST00000390990 CHDHQ8NE62 594 aaPredicted RBP0.3□□□□□ -2.36
RNU6-239P-201ENST00000390990 SLC26A7Q8TE54 656 aa0.3□□□□□ -2.36
RNU6-239P-201ENST00000390990 PNPLA2Q96AD5 504 aa0.3□□□□□ -2.36
RNU6-239P-201ENST00000390990 ZNF274Q96GC6 653 aaPredicted RBP0.3□□□□□ -2.36
RNU6-239P-201ENST00000390990 LRRC3BQ96PB8 259 aa0.3□□□□□ -2.36
RNU6-239P-201ENST00000390990 SPIN2AQ99865 258 aa0.3□□□□□ -2.36
RNU6-239P-201ENST00000390990 CITED2Q99967 270 aaPredicted RBP0.3□□□□□ -2.36
RNU6-239P-201ENST00000390990 SPIN2BQ9BPZ2 258 aa0.3□□□□□ -2.36
RNU6-239P-201ENST00000390990 CCM2Q9BSQ5 444 aa0.3□□□□□ -2.36
RNU6-239P-201ENST00000390990 TEX12Q9BXU0 123 aa0.3□□□□□ -2.36
RNU6-239P-201ENST00000390990 ELOVL4Q9GZR5 314 aa0.3□□□□□ -2.36
RNU6-239P-201ENST00000390990 MTIF3Q9H2K0 278 aaKnown RBP0.3□□□□□ -2.36
RNU6-239P-201ENST00000390990 S100A14Q9HCY8 104 aa0.3□□□□□ -2.36
RNU6-239P-201ENST00000390990 PIH1D3Q9NQM4 214 aaKnown RBP0.3□□□□□ -2.36
RNU6-239P-201ENST00000390990 GIMAP4Q9NUV9 329 aa0.3□□□□□ -2.36
RNU6-239P-201ENST00000390990 OPN4Q9UHM6 478 aa0.3□□□□□ -2.36
RNU6-239P-201ENST00000390990 TBX21Q9UL17 535 aa0.3□□□□□ -2.36
RNU6-239P-201ENST00000390990 RUVBL2Q9Y230 463 aaKnown RBP0.3□□□□□ -2.36
RNU6-239P-201ENST00000390990 A0A096LNJ9 63 aa0.29□□□□□ -2.36
RNU6-239P-201ENST00000390990 SLC17A2O00624 439 aa0.29□□□□□ -2.36
RNU6-239P-201ENST00000390990 OR7A17O14581 309 aa0.29□□□□□ -2.36
RNU6-239P-201ENST00000390990 RIPK2O43353 540 aa0.29□□□□□ -2.36
RNU6-239P-201ENST00000390990 PLOD3O60568 738 aa0.29□□□□□ -2.36
RNU6-239P-201ENST00000390990 SUPT7LO94864 414 aa0.29□□□□□ -2.36
RNU6-239P-201ENST00000390990 CELF2O95319 508 aaKnown RBP0.29□□□□□ -2.36
RNU6-239P-201ENST00000390990 ALPIP09923 528 aa0.29□□□□□ -2.36
RNU6-239P-201ENST00000390990 ADRA2CP18825 462 aa0.29□□□□□ -2.36
RNU6-239P-201ENST00000390990 SAT1P21673 171 aa0.29□□□□□ -2.36
RNU6-239P-201ENST00000390990 EEF1B2P24534 225 aaKnown RBP0.29□□□□□ -2.36
RNU6-239P-201ENST00000390990 ACP1P24666 158 aa0.29□□□□□ -2.36
RNU6-239P-201ENST00000390990 ACKR3P25106 362 aa0.29□□□□□ -2.36
RNU6-239P-201ENST00000390990 CALML3P27482 149 aa0.29□□□□□ -2.36
RNU6-239P-201ENST00000390990 SRD5A2P31213 254 aa0.29□□□□□ -2.36
RNU6-239P-201ENST00000390990 UGT1A3P35503 534 aa0.29□□□□□ -2.36
RNU6-239P-201ENST00000390990 CRKLP46109 303 aaKnown RBP0.29□□□□□ -2.36
RNU6-239P-201ENST00000390990 RPS9P46781 194 aaKnown RBP0.29□□□□□ -2.36
RNU6-239P-201ENST00000390990 LHX2P50458 406 aa0.29□□□□□ -2.36
RNU6-239P-201ENST00000390990 MPP1Q00013 466 aa0.29□□□□□ -2.36
RNU6-239P-201ENST00000390990 GPR50Q13585 617 aa0.29□□□□□ -2.36
RNU6-239P-201ENST00000390990 CEACAM7Q14002 265 aa0.29□□□□□ -2.36
RNU6-239P-201ENST00000390990 NTRK2Q16620 822 aa0.29□□□□□ -2.36
RNU6-239P-201ENST00000390990 MS4A13Q5J8X5 152 aa0.29□□□□□ -2.36
RNU6-239P-201ENST00000390990 KLHL10Q6JEL2 608 aa0.29□□□□□ -2.36
RNU6-239P-201ENST00000390990 OLFM4Q6UX06 510 aa0.29□□□□□ -2.36
RNU6-239P-201ENST00000390990 BTNL8Q6UX41 500 aa0.29□□□□□ -2.36
RNU6-239P-201ENST00000390990 OTOAQ7RTW8 1153 aa0.29□□□□□ -2.36
RNU6-239P-201ENST00000390990 PRSS48Q7RTY5 328 aa0.29□□□□□ -2.36
RNU6-239P-201ENST00000390990 TC2NQ8N9U0 490 aa0.29□□□□□ -2.36
RNU6-239P-201ENST00000390990 SUMF2Q8NBJ7 301 aa0.29□□□□□ -2.36
RNU6-239P-201ENST00000390990 GRK7Q8WTQ7 553 aa0.29□□□□□ -2.36
RNU6-239P-201ENST00000390990 PRPF31Q8WWY3 499 aaKnown RBP0.29□□□□□ -2.36
RNU6-239P-201ENST00000390990 DCUN1D4Q92564 292 aa0.29□□□□□ -2.36
RNU6-239P-201ENST00000390990 FAM120BQ96EK7 910 aaKnown RBP0.29□□□□□ -2.36
RNU6-239P-201ENST00000390990 LINC00615Q96LM1 132 aaPredicted RBP0.29□□□□□ -2.36
RNU6-239P-201ENST00000390990 ERGIC2Q96RQ1 377 aa0.29□□□□□ -2.36
RNU6-239P-201ENST00000390990 NICN1Q9BSH3 213 aa0.29□□□□□ -2.36
RNU6-239P-201ENST00000390990 DPH7Q9BTV6 452 aa0.29□□□□□ -2.36
RNU6-239P-201ENST00000390990 MRPL1Q9BYD6 325 aaKnown RBP0.29□□□□□ -2.36
RNU6-239P-201ENST00000390990 NACAP1Q9BZK3 213 aa0.29□□□□□ -2.36
RNU6-239P-201ENST00000390990 CARD9Q9H257 536 aa0.29□□□□□ -2.36
RNU6-239P-201ENST00000390990 EIF3KQ9UBQ5 218 aaKnown RBP0.29□□□□□ -2.36
RNU6-239P-201ENST00000390990 SEC14L4Q9UDX3 406 aa0.29□□□□□ -2.36
RNU6-239P-201ENST00000390990 EDDM13A0A1B0GTR0 161 aa0.28□□□□□ -2.36
RNU6-239P-201ENST00000390990 A0A1W2PPW3 197 aa0.28□□□□□ -2.36
RNU6-239P-201ENST00000390990 NBR2O15453 112 aa0.28□□□□□ -2.36
RNU6-239P-201ENST00000390990 ZBED4O75132 1171 aa0.28□□□□□ -2.36
RNU6-239P-201ENST00000390990 PCCAP05165 728 aaPredicted RBP0.28□□□□□ -2.36
RNU6-239P-201ENST00000390990 IGHV4-34P06331 123 aa0.28□□□□□ -2.36
RNU6-239P-201ENST00000390990 ERCC2P18074 760 aa0.28□□□□□ -2.36
RNU6-239P-201ENST00000390990 RCC1P18754 421 aaPredicted RBP0.28□□□□□ -2.36
RNU6-239P-201ENST00000390990 IGHV1-2P23083 117 aa0.28□□□□□ -2.36
RNU6-239P-201ENST00000390990 CD1BP29016 333 aa0.28□□□□□ -2.36
RNU6-239P-201ENST00000390990 LONP1P36776 959 aaKnown RBP0.28□□□□□ -2.36
RNU6-239P-201ENST00000390990 OR1D4P47884 311 aa0.28□□□□□ -2.36
RNU6-239P-201ENST00000390990 ARF3P61204 181 aaPredicted RBP0.28□□□□□ -2.36
RNU6-239P-201ENST00000390990 ARF1P84077 181 aaKnown RBP0.28□□□□□ -2.36
RNU6-239P-201ENST00000390990 MC1RQ01726 317 aa0.28□□□□□ -2.36
RNU6-239P-201ENST00000390990 RBPJQ06330 500 aa0.28□□□□□ -2.36
RNU6-239P-201ENST00000390990 SNTB1Q13884 538 aaKnown RBP0.28□□□□□ -2.36
RNU6-239P-201ENST00000390990 GGTLC2Q14390 218 aa0.28□□□□□ -2.36
RNU6-239P-201ENST00000390990 C5orf47Q569G3 176 aa0.28□□□□□ -2.36
RNU6-239P-201ENST00000390990 SEL1L2Q5TEA6 688 aa0.28□□□□□ -2.36
RNU6-239P-201ENST00000390990 HSD17B13Q7Z5P4 300 aaPredicted RBP0.28□□□□□ -2.36
RNU6-239P-201ENST00000390990 NRARPQ7Z6K4 114 aa0.28□□□□□ -2.36
RNU6-239P-201ENST00000390990 ZNF429Q86V71 674 aa0.28□□□□□ -2.36
RNU6-239P-201ENST00000390990 SMAP1Q8IYB5 467 aaPredicted RBP0.28□□□□□ -2.36
RNU6-239P-201ENST00000390990 C20orf203Q8NBC4 194 aa0.28□□□□□ -2.36
RNU6-239P-201ENST00000390990 OR2L8Q8NGY9 312 aa0.28□□□□□ -2.36
RNU6-239P-201ENST00000390990 SPSB1Q96BD6 273 aa0.28□□□□□ -2.36
RNU6-239P-201ENST00000390990 IL4I1Q96RQ9 567 aa0.28□□□□□ -2.36
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms