RNA–Protein interactions for RNA: ENST00000390624.3

IGHV3-48-201, Transcript of immunoglobulin heavy variable 3-48, humanhuman

APPRIS P1 BASIC

Gene IGHV3-48, Length 432 nt, Biotype IG V gene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-48-201ENST00000390624 POLEQ07864 2286 aa13.13□□□□□ -0.31
IGHV3-48-201ENST00000390624 HRKO00198 91 aa13.13□□□□□ -0.31
IGHV3-48-201ENST00000390624 OR6B1O95007 311 aa13.13□□□□□ -0.31
IGHV3-48-201ENST00000390624 UNC5CO95185 931 aa13.13□□□□□ -0.31
IGHV3-48-201ENST00000390624 STSP08842 583 aa13.13□□□□□ -0.31
IGHV3-48-201ENST00000390624 CHN1P15882 459 aa13.13□□□□□ -0.31
IGHV3-48-201ENST00000390624 DEKP35659 375 aaKnown RBP13.13□□□□□ -0.31
IGHV3-48-201ENST00000390624 SOX3P41225 446 aa13.13□□□□□ -0.31
IGHV3-48-201ENST00000390624 KCNK10P57789 538 aa13.13□□□□□ -0.31
IGHV3-48-201ENST00000390624 ERVK-8P63133 956 aa13.13□□□□□ -0.31
IGHV3-48-201ENST00000390624 RBPJQ06330 500 aa13.13□□□□□ -0.31
IGHV3-48-201ENST00000390624 ACSM2AQ08AH3 577 aa13.13□□□□□ -0.31
IGHV3-48-201ENST00000390624 SPIN4Q56A73 249 aa13.13□□□□□ -0.31
IGHV3-48-201ENST00000390624 PIGGQ5H8A4 983 aa13.13□□□□□ -0.31
IGHV3-48-201ENST00000390624 ACSM2BQ68CK6 577 aa13.13□□□□□ -0.31
IGHV3-48-201ENST00000390624 SLC48A1Q6P1K1 146 aa13.13□□□□□ -0.31
IGHV3-48-201ENST00000390624 OPN5Q6U736 354 aa13.13□□□□□ -0.31
IGHV3-48-201ENST00000390624 RNF111Q6ZNA4 994 aa13.13□□□□□ -0.31
IGHV3-48-201ENST00000390624 SLC29A4Q7RTT9 530 aa13.13□□□□□ -0.31
IGHV3-48-201ENST00000390624 MDGA2Q7Z553 956 aa13.13□□□□□ -0.31
IGHV3-48-201ENST00000390624 SULF2Q8IWU5 870 aa13.13□□□□□ -0.31
IGHV3-48-201ENST00000390624 MREGQ8N565 214 aa13.13□□□□□ -0.31
IGHV3-48-201ENST00000390624 CPSF7Q8N684 471 aaKnown RBP13.13□□□□□ -0.31
IGHV3-48-201ENST00000390624 BANPQ8N9N5 519 aa13.13□□□□□ -0.31
IGHV3-48-201ENST00000390624 POGLUT1Q8NBL1 392 aa13.13□□□□□ -0.31
IGHV3-48-201ENST00000390624 APOPT1Q96IL0 206 aa13.13□□□□□ -0.31
IGHV3-48-201ENST00000390624 FAIM2Q9BWQ8 316 aa13.13□□□□□ -0.31
IGHV3-48-201ENST00000390624 ACPTQ9BZG2 426 aa13.13□□□□□ -0.31
IGHV3-48-201ENST00000390624 CXorf21Q9HAI6 301 aa13.13□□□□□ -0.31
IGHV3-48-201ENST00000390624 RYDENQ9NUL5 291 aaKnown RBP13.13□□□□□ -0.31
IGHV3-48-201ENST00000390624 MKS1Q9NXB0 559 aa13.13□□□□□ -0.31
IGHV3-48-201ENST00000390624 MCM8Q9UJA3 840 aa13.13□□□□□ -0.31
IGHV3-48-201ENST00000390624 CES1P1Q9UKY3 287 aa13.13□□□□□ -0.31
IGHV3-48-201ENST00000390624 ERVK-19Q9WJR5 959 aa13.13□□□□□ -0.31
IGHV3-48-201ENST00000390624 LRRK2Q5S007 2527 aa13.13□□□□□ -0.31
IGHV3-48-201ENST00000390624 HIVEP3Q5T1R4 2406 aa13.13□□□□□ -0.31
IGHV3-48-201ENST00000390624 A0A1B0GUH1 482 aa13.12□□□□□ -0.31
IGHV3-48-201ENST00000390624 WIPF3A6NGB9 483 aa13.12□□□□□ -0.31
IGHV3-48-201ENST00000390624 GOLGA6L10A6NI86 522 aa13.12□□□□□ -0.31
IGHV3-48-201ENST00000390624 OR6C76A6NM76 312 aa13.12□□□□□ -0.31
IGHV3-48-201ENST00000390624 LRRTM2O43300 516 aa13.12□□□□□ -0.31
IGHV3-48-201ENST00000390624 PEX1O43933 1283 aa13.12□□□□□ -0.31
IGHV3-48-201ENST00000390624 TRIM13O60858 407 aa13.12□□□□□ -0.31
IGHV3-48-201ENST00000390624 CRCPO75575 148 aa13.12□□□□□ -0.31
IGHV3-48-201ENST00000390624 WISP2O76076 250 aa13.12□□□□□ -0.31
IGHV3-48-201ENST00000390624 TUBBP07437 444 aa13.12□□□□□ -0.31
IGHV3-48-201ENST00000390624 CPMP14384 443 aa13.12□□□□□ -0.31
IGHV3-48-201ENST00000390624 PORP16435 677 aaPredicted RBP13.12□□□□□ -0.31
IGHV3-48-201ENST00000390624 HTR6P50406 440 aa13.12□□□□□ -0.31
IGHV3-48-201ENST00000390624 FOXA1P55317 472 aa13.12□□□□□ -0.31
IGHV3-48-201ENST00000390624 SLC37A1P57057 533 aa13.12□□□□□ -0.31
IGHV3-48-201ENST00000390624 HMGCS1Q01581 520 aa13.12□□□□□ -0.31
IGHV3-48-201ENST00000390624 ASPHQ12797 758 aa13.12□□□□□ -0.31
IGHV3-48-201ENST00000390624 ZNF800Q2TB10 664 aaPredicted RBP eCLIP13.12□□□□□ -0.31
IGHV3-48-201ENST00000390624 SPDYAQ5MJ70 313 aa13.12□□□□□ -0.31
IGHV3-48-201ENST00000390624 C6orf163Q5TEZ5 329 aa13.12□□□□□ -0.31
IGHV3-48-201ENST00000390624 C10orf107Q8IVU9 208 aa13.12□□□□□ -0.31
IGHV3-48-201ENST00000390624 C9orf40Q8IXQ3 194 aa13.12□□□□□ -0.31
IGHV3-48-201ENST00000390624 SRRM1Q8IYB3 904 aaKnown RBP13.12□□□□□ -0.31
IGHV3-48-201ENST00000390624 SLC15A4Q8N697 577 aa13.12□□□□□ -0.31
IGHV3-48-201ENST00000390624 PSD4Q8NDX1 1056 aa13.12□□□□□ -0.31
IGHV3-48-201ENST00000390624 DOK4Q8TEW6 326 aa13.12□□□□□ -0.31
IGHV3-48-201ENST00000390624 APIPQ96GX9 242 aa13.12□□□□□ -0.31
IGHV3-48-201ENST00000390624 GPR137Q96N19 417 aa13.12□□□□□ -0.31
IGHV3-48-201ENST00000390624 TMEM109Q9BVC6 243 aa13.12□□□□□ -0.31
IGHV3-48-201ENST00000390624 RAB21Q9UL25 225 aa13.12□□□□□ -0.31
IGHV3-48-201ENST00000390624 GNG14A0A1W2PPG7 69 aa13.11□□□□□ -0.31
IGHV3-48-201ENST00000390624 A0A1W2PS29 197 aa13.11□□□□□ -0.31
IGHV3-48-201ENST00000390624 NPIPA5E9PKD4 350 aa13.11□□□□□ -0.31
IGHV3-48-201ENST00000390624 ASNA1O43681 348 aa13.11□□□□□ -0.31
IGHV3-48-201ENST00000390624 PCDH7O60245 1069 aa13.11□□□□□ -0.31
IGHV3-48-201ENST00000390624 ERAL1O75616 437 aaKnown RBP13.11□□□□□ -0.31
IGHV3-48-201ENST00000390624 LDLRP01130 860 aa13.11□□□□□ -0.31
IGHV3-48-201ENST00000390624 UROSP10746 265 aa13.11□□□□□ -0.31
IGHV3-48-201ENST00000390624 DRD2P14416 443 aa13.11□□□□□ -0.31
IGHV3-48-201ENST00000390624 CSNK2A2P19784 350 aaPredicted RBP13.11□□□□□ -0.31
IGHV3-48-201ENST00000390624 ALDH9A1P49189 494 aa13.11□□□□□ -0.31
IGHV3-48-201ENST00000390624 MEOX1P50221 254 aa13.11□□□□□ -0.31
IGHV3-48-201ENST00000390624 PER3P56645 1201 aa13.11□□□□□ -0.31
IGHV3-48-201ENST00000390624 RAE1P78406 368 aaKnown RBP13.11□□□□□ -0.31
IGHV3-48-201ENST00000390624 BTKQ06187 659 aa13.11□□□□□ -0.31
IGHV3-48-201ENST00000390624 FUT7Q11130 342 aa13.11□□□□□ -0.31
IGHV3-48-201ENST00000390624 HEPACAMQ14CZ8 416 aa13.11□□□□□ -0.31
IGHV3-48-201ENST00000390624 PCLAFQ15004 111 aa13.11□□□□□ -0.31
IGHV3-48-201ENST00000390624 IMPG1Q17R60 797 aa13.11□□□□□ -0.31
IGHV3-48-201ENST00000390624 GALNT18Q6P9A2 607 aa13.11□□□□□ -0.31
IGHV3-48-201ENST00000390624 SCIMPQ6UWF3 145 aa13.11□□□□□ -0.31
IGHV3-48-201ENST00000390624 RTL4Q6ZR62 310 aa13.11□□□□□ -0.31
IGHV3-48-201ENST00000390624 TRIM46Q7Z4K8 759 aa13.11□□□□□ -0.31
IGHV3-48-201ENST00000390624 SIAH3Q8IW03 269 aa13.11□□□□□ -0.31
IGHV3-48-201ENST00000390624 GALNT12Q8IXK2 581 aa13.11□□□□□ -0.31
IGHV3-48-201ENST00000390624 GOLM1Q8NBJ4 401 aa13.11□□□□□ -0.31
IGHV3-48-201ENST00000390624 C16orf52Q8NHV5 167 aa13.11□□□□□ -0.31
IGHV3-48-201ENST00000390624 SLC22A8Q8TCC7 542 aa13.11□□□□□ -0.31
IGHV3-48-201ENST00000390624 C11orf24Q96F05 449 aaPredicted RBP13.11□□□□□ -0.31
IGHV3-48-201ENST00000390624 SGCZQ96LD1 299 aa13.11□□□□□ -0.31
IGHV3-48-201ENST00000390624 SMC6Q96SB8 1091 aa13.11□□□□□ -0.31
IGHV3-48-201ENST00000390624 TRMOQ9BU70 441 aa13.11□□□□□ -0.31
IGHV3-48-201ENST00000390624 SIRT5Q9NXA8 310 aa13.11□□□□□ -0.31
IGHV3-48-201ENST00000390624 NPIPA1Q9UND3 350 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms