RNA–Protein interactions for RNA: ENST00000390357.3

TRBV4-1-201, Transcript of T cell receptor beta variable 4-1, humanhuman

APPRIS P1 BASIC

Gene TRBV4-1, Length 373 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV4-1-201ENST00000390357 PDE9AO76083 593 aa12.56□□□□□ -0.4
TRBV4-1-201ENST00000390357 SIX3O95343 332 aaPredicted RBP12.56□□□□□ -0.4
TRBV4-1-201ENST00000390357 ACSL3O95573 720 aa12.56□□□□□ -0.4
TRBV4-1-201ENST00000390357 OTCP00480 354 aa12.56□□□□□ -0.4
TRBV4-1-201ENST00000390357 NR2F6P10588 404 aa12.56□□□□□ -0.4
TRBV4-1-201ENST00000390357 PRF1P14222 555 aa12.56□□□□□ -0.4
TRBV4-1-201ENST00000390357 ELAVL4P26378 380 aaKnown RBP12.56□□□□□ -0.4
TRBV4-1-201ENST00000390357 CHRNB4P30926 498 aa12.56□□□□□ -0.4
TRBV4-1-201ENST00000390357 RFC3P40938 356 aa12.56□□□□□ -0.4
TRBV4-1-201ENST00000390357 RPP38P78345 283 aaKnown RBP12.56□□□□□ -0.4
TRBV4-1-201ENST00000390357 ID2Q02363 134 aa12.56□□□□□ -0.4
TRBV4-1-201ENST00000390357 ZNF267Q14586 743 aaPredicted RBP12.56□□□□□ -0.4
TRBV4-1-201ENST00000390357 OR52E8Q6IFG1 317 aa12.56□□□□□ -0.4
TRBV4-1-201ENST00000390357 OR4K14Q8NGD5 310 aa12.56□□□□□ -0.4
TRBV4-1-201ENST00000390357 SPACA9Q96E40 222 aaPredicted RBP12.56□□□□□ -0.4
TRBV4-1-201ENST00000390357 SECISBP2Q96T21 854 aaKnown RBP12.56□□□□□ -0.4
TRBV4-1-201ENST00000390357 CNPPD1Q9BV87 410 aa12.56□□□□□ -0.4
TRBV4-1-201ENST00000390357 SORBS1Q9BX66 1292 aaKnown RBP12.56□□□□□ -0.4
TRBV4-1-201ENST00000390357 C1QTNF3Q9BXJ4 246 aa12.56□□□□□ -0.4
TRBV4-1-201ENST00000390357 ELOVL6Q9H5J4 265 aa12.56□□□□□ -0.4
TRBV4-1-201ENST00000390357 BRF2Q9HAW0 419 aa12.56□□□□□ -0.4
TRBV4-1-201ENST00000390357 SH2D2AQ9NP31 389 aa12.56□□□□□ -0.4
TRBV4-1-201ENST00000390357 PCTPQ9UKL6 214 aa12.56□□□□□ -0.4
TRBV4-1-201ENST00000390357 BOKQ9UMX3 212 aaPredicted RBP12.56□□□□□ -0.4
TRBV4-1-201ENST00000390357 SNX6Q9UNH7 406 aa12.56□□□□□ -0.4
TRBV4-1-201ENST00000390357 CFL2Q9Y281 166 aa12.56□□□□□ -0.4
TRBV4-1-201ENST00000390357 SEC23IPQ9Y6Y8 1000 aaKnown RBP12.56□□□□□ -0.4
TRBV4-1-201ENST00000390357 C2orf92A0A1B0GVN3 265 aa12.55□□□□□ -0.4
TRBV4-1-201ENST00000390357 C1orf226A1L170 272 aa12.55□□□□□ -0.4
TRBV4-1-201ENST00000390357 PINLYPA6NC86 204 aa12.55□□□□□ -0.4
TRBV4-1-201ENST00000390357 POC1B-GALNT4F8VUJ3 575 aa12.55□□□□□ -0.4
TRBV4-1-201ENST00000390357 TMPRSS11DO60235 418 aa12.55□□□□□ -0.4
TRBV4-1-201ENST00000390357 WDR1O75083 606 aa12.55□□□□□ -0.4
TRBV4-1-201ENST00000390357 EEDO75530 441 aaKnown RBP12.55□□□□□ -0.4
TRBV4-1-201ENST00000390357 FBXO45P0C2W1 286 aa12.55□□□□□ -0.4
TRBV4-1-201ENST00000390357 GABRA1P14867 456 aa12.55□□□□□ -0.4
TRBV4-1-201ENST00000390357 TAC1P20366 129 aa12.55□□□□□ -0.4
TRBV4-1-201ENST00000390357 MAN2A2P49641 1150 aa12.55□□□□□ -0.4
TRBV4-1-201ENST00000390357 TMED10P49755 219 aaKnown RBP12.55□□□□□ -0.4
TRBV4-1-201ENST00000390357 NEK2P51955 445 aa12.55□□□□□ -0.4
TRBV4-1-201ENST00000390357 SLC37A1P57057 533 aa12.55□□□□□ -0.4
TRBV4-1-201ENST00000390357 TRA2BP62995 288 aaKnown RBP12.55□□□□□ -0.4
TRBV4-1-201ENST00000390357 HERVK_113P63132 956 aa12.55□□□□□ -0.4
TRBV4-1-201ENST00000390357 ERVK-8P63133 956 aa12.55□□□□□ -0.4
TRBV4-1-201ENST00000390357 FOXO1Q12778 655 aa12.55□□□□□ -0.4
TRBV4-1-201ENST00000390357 CCNYL2Q5T2Q4 361 aa12.55□□□□□ -0.4
TRBV4-1-201ENST00000390357 WLSQ5T9L3 541 aa12.55□□□□□ -0.4
TRBV4-1-201ENST00000390357 C6orf163Q5TEZ5 329 aa12.55□□□□□ -0.4
TRBV4-1-201ENST00000390357 HLA-DQA1Q5Y7H0 255 aa12.55□□□□□ -0.4
TRBV4-1-201ENST00000390357 TIFABQ6ZNK6 161 aa12.55□□□□□ -0.4
TRBV4-1-201ENST00000390357 TRILQ7L0X0 811 aa12.55□□□□□ -0.4
TRBV4-1-201ENST00000390357 C9orf40Q8IXQ3 194 aa12.55□□□□□ -0.4
TRBV4-1-201ENST00000390357 METTL4Q8N3J2 472 aa12.55□□□□□ -0.4
TRBV4-1-201ENST00000390357 RNF175Q8N4F7 328 aa12.55□□□□□ -0.4
TRBV4-1-201ENST00000390357 TMEM251Q8N6I4 163 aa12.55□□□□□ -0.4
TRBV4-1-201ENST00000390357 CEP112Q8N8E3 955 aa12.55□□□□□ -0.4
TRBV4-1-201ENST00000390357 ACBD4Q8NC06 268 aa12.55□□□□□ -0.4
TRBV4-1-201ENST00000390357 C17orf47Q8NEP4 570 aa12.55□□□□□ -0.4
TRBV4-1-201ENST00000390357 OR7G1Q8NGA0 311 aa12.55□□□□□ -0.4
TRBV4-1-201ENST00000390357 OR52B6Q8NGF0 335 aa12.55□□□□□ -0.4
TRBV4-1-201ENST00000390357 ZNF592Q92610 1267 aa12.55□□□□□ -0.4
TRBV4-1-201ENST00000390357 ERVK-6Q9BXR3 956 aa12.55□□□□□ -0.4
TRBV4-1-201ENST00000390357 LDAHQ9H6V9 325 aa12.55□□□□□ -0.4
TRBV4-1-201ENST00000390357 ZFP64Q9NPA5 681 aa12.55□□□□□ -0.4
TRBV4-1-201ENST00000390357 ACKR4Q9NPB9 350 aa12.55□□□□□ -0.4
TRBV4-1-201ENST00000390357 KCNJ16Q9NPI9 418 aa12.55□□□□□ -0.4
TRBV4-1-201ENST00000390357 XPR1Q9UBH6 696 aa12.55□□□□□ -0.4
TRBV4-1-201ENST00000390357 ERVK-19Q9WJR5 959 aa12.55□□□□□ -0.4
TRBV4-1-201ENST00000390357 CENPEQ02224 2701 aa12.55□□□□□ -0.4
TRBV4-1-201ENST00000390357 DNAJC13O75165 2243 aa12.54□□□□□ -0.4
TRBV4-1-201ENST00000390357 LRRC14BA6NHZ5 514 aa12.54□□□□□ -0.4
TRBV4-1-201ENST00000390357 GOLGA6L10A6NI86 522 aa12.54□□□□□ -0.4
TRBV4-1-201ENST00000390357 NPIPA2E9PIF3 369 aa12.54□□□□□ -0.4
TRBV4-1-201ENST00000390357 NPIPA3F8WFD2 350 aa12.54□□□□□ -0.4
TRBV4-1-201ENST00000390357 SNX4O95219 450 aa12.54□□□□□ -0.4
TRBV4-1-201ENST00000390357 NADKO95544 446 aaPredicted RBP12.54□□□□□ -0.4
TRBV4-1-201ENST00000390357 HSD3B1P14060 373 aa12.54□□□□□ -0.4
TRBV4-1-201ENST00000390357 PORP16435 677 aaPredicted RBP12.54□□□□□ -0.4
TRBV4-1-201ENST00000390357 NAGAP17050 411 aa12.54□□□□□ -0.4
TRBV4-1-201ENST00000390357 HSD3B2P26439 372 aa12.54□□□□□ -0.4
TRBV4-1-201ENST00000390357 ACVR2AP27037 513 aa12.54□□□□□ -0.4
TRBV4-1-201ENST00000390357 KIR3DL1P43629 444 aa12.54□□□□□ -0.4
TRBV4-1-201ENST00000390357 XKP51811 444 aa12.54□□□□□ -0.4
TRBV4-1-201ENST00000390357 NRG3P56975 720 aa12.54□□□□□ -0.4
TRBV4-1-201ENST00000390357 FUT7Q11130 342 aa12.54□□□□□ -0.4
TRBV4-1-201ENST00000390357 EBPQ15125 230 aaKnown RBP12.54□□□□□ -0.4
TRBV4-1-201ENST00000390357 SF3B4Q15427 424 aaKnown RBP eCLIP12.54□□□□□ -0.4
TRBV4-1-201ENST00000390357 NTRK2Q16620 822 aa12.54□□□□□ -0.4
TRBV4-1-201ENST00000390357 TMEM198Q66K66 360 aa12.54□□□□□ -0.4
TRBV4-1-201ENST00000390357 LYPD8Q6UX82 237 aa12.54□□□□□ -0.4
TRBV4-1-201ENST00000390357 TRMT10CQ7L0Y3 403 aaKnown RBP12.54□□□□□ -0.4
TRBV4-1-201ENST00000390357 IFT20Q8IY31 132 aa12.54□□□□□ -0.4
TRBV4-1-201ENST00000390357 FBXW8Q8N3Y1 598 aa12.54□□□□□ -0.4
TRBV4-1-201ENST00000390357 OR4F6Q8NGB9 312 aa12.54□□□□□ -0.4
TRBV4-1-201ENST00000390357 DCAKDQ8WVC6 231 aa12.54□□□□□ -0.4
TRBV4-1-201ENST00000390357 CDK15Q96Q40 435 aa12.54□□□□□ -0.4
TRBV4-1-201ENST00000390357 SMC6Q96SB8 1091 aa12.54□□□□□ -0.4
TRBV4-1-201ENST00000390357 TREX2Q9BQ50 279 aaPredicted RBP12.54□□□□□ -0.4
TRBV4-1-201ENST00000390357 WWTR1Q9GZV5 400 aa12.54□□□□□ -0.4
TRBV4-1-201ENST00000390357 CXorf21Q9HAI6 301 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms