RNA–Protein interactions for RNA: ENST00000384254.1

RNU6-40P-201, Transcript of RNA, U6 small nuclear 40, pseudogene, humanhuman

BASIC

Gene RNU6-40P, Length 107 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-40P-201ENST00000384254 UGT1A4P22310 534 aa4.54□□□□□ -1.68
RNU6-40P-201ENST00000384254 RPA1P27694 616 aa4.54□□□□□ -1.68
RNU6-40P-201ENST00000384254 PRDX6P30041 224 aa4.54□□□□□ -1.68
RNU6-40P-201ENST00000384254 OXTRP30559 389 aa4.54□□□□□ -1.68
RNU6-40P-201ENST00000384254 CD86P42081 329 aa4.54□□□□□ -1.68
RNU6-40P-201ENST00000384254 RPS27AP62979 156 aaKnown RBP4.54□□□□□ -1.68
RNU6-40P-201ENST00000384254 IRX1P78414 480 aaPredicted RBP4.54□□□□□ -1.68
RNU6-40P-201ENST00000384254 GSTO1P78417 241 aa4.54□□□□□ -1.68
RNU6-40P-201ENST00000384254 SRPXP78539 464 aa4.54□□□□□ -1.68
RNU6-40P-201ENST00000384254 HTD2P86397 168 aa4.54□□□□□ -1.68
RNU6-40P-201ENST00000384254 CALCOCO2Q13137 446 aa4.54□□□□□ -1.68
RNU6-40P-201ENST00000384254 RIGQ13278 110 aa4.54□□□□□ -1.68
RNU6-40P-201ENST00000384254 KLF5Q13887 457 aaPredicted RBP4.54□□□□□ -1.68
RNU6-40P-201ENST00000384254 AGKQ53H12 422 aa4.54□□□□□ -1.68
RNU6-40P-201ENST00000384254 MUC21Q5SSG8 566 aa4.54□□□□□ -1.68
RNU6-40P-201ENST00000384254 GFI1BQ5VTD9 330 aa4.54□□□□□ -1.68
RNU6-40P-201ENST00000384254 STEAP1BQ6NZ63 245 aa4.54□□□□□ -1.68
RNU6-40P-201ENST00000384254 FAM159AQ6UWV7 190 aa4.54□□□□□ -1.68
RNU6-40P-201ENST00000384254 TMEM26Q6ZUK4 368 aa4.54□□□□□ -1.68
RNU6-40P-201ENST00000384254 BANPQ8N9N5 519 aa4.54□□□□□ -1.68
RNU6-40P-201ENST00000384254 LINC00479Q96M42 142 aa4.54□□□□□ -1.68
RNU6-40P-201ENST00000384254 C16orf45Q96MC5 204 aaPredicted RBP4.54□□□□□ -1.68
RNU6-40P-201ENST00000384254 DEFB118Q96PH6 123 aa4.54□□□□□ -1.68
RNU6-40P-201ENST00000384254 JPH2Q9BR39 696 aaPredicted RBP4.54□□□□□ -1.68
RNU6-40P-201ENST00000384254 NMNAT2Q9BZQ4 307 aa4.54□□□□□ -1.68
RNU6-40P-201ENST00000384254 FAM124BQ9H5Z6 455 aaPredicted RBP4.54□□□□□ -1.68
RNU6-40P-201ENST00000384254 DCTPP1Q9H773 170 aa4.54□□□□□ -1.68
RNU6-40P-201ENST00000384254 MOB1AQ9H8S9 216 aa4.54□□□□□ -1.68
RNU6-40P-201ENST00000384254 SLC25A19Q9HC21 320 aa4.54□□□□□ -1.68
RNU6-40P-201ENST00000384254 SOHLH2Q9NX45 425 aa4.54□□□□□ -1.68
RNU6-40P-201ENST00000384254 TAS2R3Q9NYW6 316 aa4.54□□□□□ -1.68
RNU6-40P-201ENST00000384254 MGAT4AQ9UM21 535 aa4.54□□□□□ -1.68
RNU6-40P-201ENST00000384254 SLC9A8Q9Y2E8 581 aa4.54□□□□□ -1.68
RNU6-40P-201ENST00000384254 SLC6A5Q9Y345 797 aa4.54□□□□□ -1.68
RNU6-40P-201ENST00000384254 AUP1Q9Y679 476 aa4.54□□□□□ -1.68
RNU6-40P-201ENST00000384254 AFF2P51816 1311 aa4.53□□□□□ -1.68
RNU6-40P-201ENST00000384254 IGHV4-30-2A0A087WSY4 118 aa4.53□□□□□ -1.68
RNU6-40P-201ENST00000384254 IGHV3-38A0A0C4DH36 116 aa4.53□□□□□ -1.68
RNU6-40P-201ENST00000384254 ASB14A6NK59 587 aa4.53□□□□□ -1.68
RNU6-40P-201ENST00000384254 PDHXO00330 501 aa4.53□□□□□ -1.68
RNU6-40P-201ENST00000384254 TSPAN2O60636 221 aa4.53□□□□□ -1.68
RNU6-40P-201ENST00000384254 PDGFBP01127 241 aaPredicted RBP4.53□□□□□ -1.68
RNU6-40P-201ENST00000384254 CAPGP40121 348 aa4.53□□□□□ -1.68
RNU6-40P-201ENST00000384254 MTIF2P46199 727 aaKnown RBP4.53□□□□□ -1.68
RNU6-40P-201ENST00000384254 SLC6A8P48029 635 aa4.53□□□□□ -1.68
RNU6-40P-201ENST00000384254 NPY2RP49146 381 aa4.53□□□□□ -1.68
RNU6-40P-201ENST00000384254 GPC3P51654 580 aa4.53□□□□□ -1.68
RNU6-40P-201ENST00000384254 ZNF131P52739 623 aa4.53□□□□□ -1.68
RNU6-40P-201ENST00000384254 RIDAP52758 137 aaKnown RBP4.53□□□□□ -1.68
RNU6-40P-201ENST00000384254 NDST1P52848 882 aa4.53□□□□□ -1.68
RNU6-40P-201ENST00000384254 MTTPP55157 894 aa4.53□□□□□ -1.68
RNU6-40P-201ENST00000384254 POLR2FP61218 127 aaKnown RBP4.53□□□□□ -1.68
RNU6-40P-201ENST00000384254 RPS4XP62701 263 aaKnown RBP4.53□□□□□ -1.68
RNU6-40P-201ENST00000384254 FKBP3Q00688 224 aaKnown RBP4.53□□□□□ -1.68
RNU6-40P-201ENST00000384254 CLPPQ16740 277 aaPredicted RBP4.53□□□□□ -1.68
RNU6-40P-201ENST00000384254 HAGHQ16775 308 aa4.53□□□□□ -1.68
RNU6-40P-201ENST00000384254 ISLR2Q6UXK2 745 aa4.53□□□□□ -1.68
RNU6-40P-201ENST00000384254 Q6ZTC4 211 aa4.53□□□□□ -1.68
RNU6-40P-201ENST00000384254 RNF130Q86XS8 419 aa4.53□□□□□ -1.68
RNU6-40P-201ENST00000384254 RNF148Q8N7C7 305 aa4.53□□□□□ -1.68
RNU6-40P-201ENST00000384254 C11orf45Q8TAV5 145 aa4.53□□□□□ -1.68
RNU6-40P-201ENST00000384254 DQX1Q8TE96 717 aaKnown RBP4.53□□□□□ -1.68
RNU6-40P-201ENST00000384254 POM121L2Q96KW2 1035 aa4.53□□□□□ -1.68
RNU6-40P-201ENST00000384254 KRTAP9-8Q9BYQ0 159 aa4.53□□□□□ -1.68
RNU6-40P-201ENST00000384254 DPH5Q9H2P9 285 aa4.53□□□□□ -1.68
RNU6-40P-201ENST00000384254 IL1RAPQ9NPH3 570 aa4.53□□□□□ -1.68
RNU6-40P-201ENST00000384254 POLE3Q9NRF9 147 aa4.53□□□□□ -1.68
RNU6-40P-201ENST00000384254 DEPPQ9NTK1 212 aa4.53□□□□□ -1.68
RNU6-40P-201ENST00000384254 CNOT2Q9NZN8 540 aaKnown RBP4.53□□□□□ -1.68
RNU6-40P-201ENST00000384254 ZNF490Q9ULM2 529 aaPredicted RBP4.53□□□□□ -1.68
RNU6-40P-201ENST00000384254 DYNC1LI1Q9Y6G9 523 aaKnown RBP4.53□□□□□ -1.68
RNU6-40P-201ENST00000384254 NPC1L1Q9UHC9 1359 aa4.53□□□□□ -1.69
RNU6-40P-201ENST00000384254 ATP8B3O60423 1300 aa4.52□□□□□ -1.69
RNU6-40P-201ENST00000384254 NDUFAF8A1L188 74 aa4.52□□□□□ -1.69
RNU6-40P-201ENST00000384254 IGLON5A6NGN9 336 aa4.52□□□□□ -1.69
RNU6-40P-201ENST00000384254 BUB1O43683 1085 aa4.52□□□□□ -1.69
RNU6-40P-201ENST00000384254 AKR7A3O95154 331 aa4.52□□□□□ -1.69
RNU6-40P-201ENST00000384254 GP9P14770 177 aa4.52□□□□□ -1.69
RNU6-40P-201ENST00000384254 DNAJB1P25685 340 aa4.52□□□□□ -1.69
RNU6-40P-201ENST00000384254 MT3P25713 68 aa4.52□□□□□ -1.69
RNU6-40P-201ENST00000384254 GABPB1Q06547 395 aaPredicted RBP4.52□□□□□ -1.69
RNU6-40P-201ENST00000384254 DPYSQ14117 519 aa4.52□□□□□ -1.69
RNU6-40P-201ENST00000384254 PDIA5Q14554 519 aa4.52□□□□□ -1.69
RNU6-40P-201ENST00000384254 EMC2Q15006 297 aa4.52□□□□□ -1.69
RNU6-40P-201ENST00000384254 ZNF146Q15072 292 aa4.52□□□□□ -1.69
RNU6-40P-201ENST00000384254 C2CD6Q53TS8 623 aa4.52□□□□□ -1.69
RNU6-40P-201ENST00000384254 LDLRAP1Q5SW96 308 aa4.52□□□□□ -1.69
RNU6-40P-201ENST00000384254 AGAP7PQ5VUJ5 663 aa4.52□□□□□ -1.69
RNU6-40P-201ENST00000384254 LIPKQ5VXJ0 399 aa4.52□□□□□ -1.69
RNU6-40P-201ENST00000384254 FAAP20Q6NZ36 180 aa4.52□□□□□ -1.69
RNU6-40P-201ENST00000384254 UNC5DQ6UXZ4 953 aa4.52□□□□□ -1.69
RNU6-40P-201ENST00000384254 SYVN1Q86TM6 617 aa4.52□□□□□ -1.69
RNU6-40P-201ENST00000384254 CATSPER3Q86XQ3 398 aa4.52□□□□□ -1.69
RNU6-40P-201ENST00000384254 PYROXD2Q8N2H3 581 aa4.52□□□□□ -1.69
RNU6-40P-201ENST00000384254 FAM71CQ8NEG0 241 aa4.52□□□□□ -1.69
RNU6-40P-201ENST00000384254 OR1K1Q8NGR3 316 aa4.52□□□□□ -1.69
RNU6-40P-201ENST00000384254 NPRL2Q8WTW4 380 aa4.52□□□□□ -1.69
RNU6-40P-201ENST00000384254 ZDHHC19Q8WVZ1 309 aaPredicted RBP4.52□□□□□ -1.69
RNU6-40P-201ENST00000384254 PNPLA2Q96AD5 504 aa4.52□□□□□ -1.69
RNU6-40P-201ENST00000384254 SLC45A3Q96JT2 553 aa4.52□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms